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Identifier: 15835131

GI number: 15835131

Start: 620685

End: 621206

Strand: Direct

Name: Not Available

Synonym: TC0513

Alternate gene names: NA

Gene position: 620685-621206 (Clockwise)

Preceding gene: 15835130

Following gene: 15835132

Centisome position: 57.85

GC content: 36.78

Gene sequence:

>522_bases
ATGAAAAAGTTCTTATTGCTTAGCTTAATGTCCTTGGCTTCTTCAACCGTGTTTGCAGCAAGTTCTACAAATACAATTGG
AATTGTTAACCTACGTCGCTGCCTAGAAGAATCTGAACTAGGCAAAAAAGAATCTGCAGAATTTGAAAAAATGAAAAATC
AGTTCTCTAACAGCATAGGGAAAATGGAAGAGGAACTGTCTTCTATTTATTCTAAACTGCAGGACGACGATTACATGGAA
GGGCTATCCGAATCTGCGGCAGCTGAATTAAGAAAAAAATTCGAGGAGCTATCTTCAGAATACAACACAGCTCAGGGGCA
GTATTACCAAATACTAAATCAGAACAACCTCAAACGCATGCAAAAAATTATGGAAGCTGTGAAAAAAGCCTCTGAGGTTG
TTCGAATCCAAGAAGGCCTTTCAGCGCTTCTTAATGAAGATATTGTCTTAGCTATTGATACCTCTTCAGACAAAACGGAT
GCTGTTATTAAAATTCTTGATGATTCTTTTCAAAATAATTAA

Upstream 100 bases:

>100_bases
TTCTTCTTCGCTTTGGGAGGAGTGTTCTAGAACCCGAAAGGAAAAAGAGTCCCCTCTTTTTCCTTTCACCTATCTGCATA
TGTTTTTATAGGAAAGAATT

Downstream 100 bases:

>100_bases
CATGCGAAGCTAGCCTAGGAGTGCCGTATGTCTCAACCCGTTTATTCTCTTAAACAATTAGCTGATTTTTTAAATGTCGA
GTTTCAAGGAAATGGAGCCA

Product: cationic outer membrane protein OmpH, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKFLLLSLMSLASSTVFAASSTNTIGIVNLRRCLEESELGKKESAEFEKMKNQFSNSIGKMEEELSSIYSKLQDDDYME
GLSESAAAELRKKFEELSSEYNTAQGQYYQILNQNNLKRMQKIMEAVKKASEVVRIQEGLSALLNEDIVLAIDTSSDKTD
AVIKILDDSFQNN

Sequences:

>Translated_173_residues
MKKFLLLSLMSLASSTVFAASSTNTIGIVNLRRCLEESELGKKESAEFEKMKNQFSNSIGKMEEELSSIYSKLQDDDYME
GLSESAAAELRKKFEELSSEYNTAQGQYYQILNQNNLKRMQKIMEAVKKASEVVRIQEGLSALLNEDIVLAIDTSSDKTD
AVIKILDDSFQNN
>Mature_173_residues
MKKFLLLSLMSLASSTVFAASSTNTIGIVNLRRCLEESELGKKESAEFEKMKNQFSNSIGKMEEELSSIYSKLQDDDYME
GLSESAAAELRKKFEELSSEYNTAQGQYYQILNQNNLKRMQKIMEAVKKASEVVRIQEGLSALLNEDIVLAIDTSSDKTD
AVIKILDDSFQNN

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SKPL_CHLMU (Q9PKF2)

Other databases:

- EMBL:   AE002160
- PIR:   A81694
- RefSeq:   NP_296890.1
- ProteinModelPortal:   Q9PKF2
- GeneID:   1245873
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0513
- TIGR:   TC_0513
- HOGENOM:   HBG056953
- OMA:   CLEESAF
- ProtClustDB:   CLSK871276
- BioCyc:   CMUR243161:TC_0513-MONOMER
- InterPro:   IPR005632
- SMART:   SM00935

Pfam domain/function: PF03938 OmpH; SSF111384 OM_chaperone_Skp/OmpH

EC number: NA

Molecular weight: Translated: 19458; Mature: 19458

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLLSLMSLASSTVFAASSTNTIGIVNLRRCLEESELGKKESAEFEKMKNQFSNSIG
CHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KMEEELSSIYSKLQDDDYMEGLSESAAAELRKKFEELSSEYNTAQGQYYQILNQNNLKRM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH
QKIMEAVKKASEVVRIQEGLSALLNEDIVLAIDTSSDKTDAVIKILDDSFQNN
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKFLLLSLMSLASSTVFAASSTNTIGIVNLRRCLEESELGKKESAEFEKMKNQFSNSIG
CHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KMEEELSSIYSKLQDDDYMEGLSESAAAELRKKFEELSSEYNTAQGQYYQILNQNNLKRM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHH
QKIMEAVKKASEVVRIQEGLSALLNEDIVLAIDTSSDKTDAVIKILDDSFQNN
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935