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Identifier: 15835130

GI number: 15835130

Start: 618236

End: 620614

Strand: Direct

Name: Not Available

Synonym: TC0512

Alternate gene names: 15835130

Gene position: 618236-620614 (Clockwise)

Preceding gene: 15835129

Following gene: 15835131

Centisome position: 57.62

GC content: 38.92

Gene sequence:

>2379_bases
ATGCTTGGAATACGAAAAAAAACGATTCTGCAACTCGCTATTTTACTGTTGCTCCCCTTTTCACAAAACGCCTTTGGAAC
ATCTCCTGAAGGACGTATGGTGGTACAATCCATCACTATTGAGACTCGAGGAGAAAATGCTCAAAATAAGCGGGCTATTC
CCAAAATAAAGACAAAGCAAGGGACGCTGTTCTCTCAAACTGATTTTGACGAAGATCTAAGAACTCTCTCGAAAGATTTC
GACCGCATTGATCCTATTGTAGAGTTTCGCAATGGGCAAGCTGTTATTTCCCTTATTCTGACAGCAAAACCCGTTATCCG
ACACATTAACATCTCAGGGAATGAAGCAATTCCTACTCATAAAATTTTAAAAACCCTAGAGCTTTATAAAAACGATCTTT
TTGATCGAGAGGTTTTTTTCAAAAATTTTGATGCTTTAAGAACCCTTTACTTAAAACGCGGATACTACGATTCTCAATTG
TCCTATTCTCACGATCATAATGAGCAAGAAGGTTATATTGATATCTCAATCCAAATTAAAGAAGGGCCCTACGGACGGAT
AAAAAAATTAACAATTTCAGGTATTACTCGTACAGAAGCCTCTGATTTGGGAGACATAGTTTTAACCAAACAGTACTCTA
CAACAACAAGTTGGTTCACTGGAGCAGGGGTATACCATCCAGACATGGTGGACCAGGATCTCTTTGCCATAACAAACTAT
TTTCAAAATAAAGGTTATGCAGACGCAAAAGTCACAAAAGAAGTCTCCACAGATGCTAAAGGAAACCTCTCTCTTGTTAT
CAACGTAGATAAAGGGCCCCTGTATACTTTAGGTCACGTACATATAGAAGGTTTCACAGCTTTATCCAAGCGGTTACTTG
ATAAACAACTGTTAGTGGGCCCCAATTCCTTATATTGCCCAGAAAAAGTTTGGGCTGGAGCTCAAAAAATCCGTAATGCC
TACGCTAGATACGGATATGTAAATACCAATGTAGACGTATCTTTTGCTGTTCATCCAACGCTCCCAGTTTATGATGTTAC
TTACAGGGTTAGCGAAGGAGCTCCTTACAAAATCGGACTAATCAAAATCAAAGGGAACACACACACCAAACATGACGTAA
TTTTACATGAGACAAGTCTGTTCCCTGGAGATACTTTTGATAGATTAAAACTAGAAGATACGGAAACTCGATTACGTAAC
ACAGGCTACTTTAAAAGTGTGAGTGTCTACACGGTACGCTCACAATTAGATCCTTTGGACTCAAATAACCTTTATAGAGA
CGTTTTCATTGAAGTCAAAGAAACCGAAACAGGTAACCTAGGACTGTTCTTAGGATTCAGTTCTATAGACCATCTGTTCG
GAGGAGCAGAAATTTCAGAAAGCAATTTTGATTTATTTGGCGCCCGACACTTATTCAAAAAAGGGTTTAAATCCTTAAGA
GGTGGTGGGGAATATCTTTTCTTAAAAGCCAATTTAGGAGACAAAGTTACTGATTATACTGTTAAATGGACAAAACCTCA
TTTCTTAAACACCCCATGGATCCTAGGAGTAGAATTAGATAAATCTATTAATAAGGCTTTATCAAAAGATTATTCCGTTG
ATACCTATGGAGGAAACATCAGCACGACATACATTCTTAACGACAAACTGAAATATGGGATGTATTACCGCGGGAGCCAA
ACGAGCCTAAGTTTAAGAAAAAAAACAGAAAATCCTAACAAACCTGGACCAGATCTAGATAGTAACAAGGGATTTGTTTC
CGCGGCAGGGCTTAACGTTCTTTACGATTCTATTGACAATCCTAGAAAACCTACTATGGGTATTCGGAGCTCTTTGAACT
TTGAGTTGTCTGGATTAGGAGGAACCTATCAGTTTACAAAATTAACAGCCAGCGGCTCTATCTATCGCCTGCTAACTAAA
AAAGGTGTTTTGAAAATTCGTGGAGAAGCTAAGTTTATTAAACCTTTCGGTACAACCACAGCCCAAGGAATTCCTGTTAG
TGAGCGCTTCTTCTTAGGAGGAGAATCTACCGTTCGTGGATATAAACCATTTATTATTGGGCCTAAATTTTCTCCAACAG
AGCCTCAAGGGGGCTTATCTTCCTTATTGCTAACAGAAGAGTTTCAATATCCTCTAATTTCTCAACCCAGCATCAATGCA
TTCGTTTTTCTAGATTCGGGCTTTATTGGCACGGAAGAGTACACTATTCGACTCAAAAATCTCTGTAGCAGTGCCGGATT
TGGGTTGCGTTTTGATATGATGAATAACGTGCCCATTATGTTAGGTTGGGGTTGGCCTTTCCGCCCAACAGAAATTCTTA
ATAATGAAAAAATTGATGTATCTCAAAGATTCTTCTTCGCTTTGGGAGGAGTGTTCTAG

Upstream 100 bases:

>100_bases
TGGCAATCTCTTTCCTAAAAAAGAAATGGCACCCTACTTAATAAGAGTAGAAATAAAGCTTCATCCCTAGCGAAGACTTT
TCTAGATAAAGGAAGTAATA

Downstream 100 bases:

>100_bases
AACCCGAAAGGAAAAAGAGTCCCCTCTTTTTCCTTTCACCTATCTGCATATGTTTTTATAGGAAAGAATTATGAAAAAGT
TCTTATTGCTTAGCTTAATG

Product: outer membrane protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 792

Protein sequence:

>792_residues
MLGIRKKTILQLAILLLLPFSQNAFGTSPEGRMVVQSITIETRGENAQNKRAIPKIKTKQGTLFSQTDFDEDLRTLSKDF
DRIDPIVEFRNGQAVISLILTAKPVIRHINISGNEAIPTHKILKTLELYKNDLFDREVFFKNFDALRTLYLKRGYYDSQL
SYSHDHNEQEGYIDISIQIKEGPYGRIKKLTISGITRTEASDLGDIVLTKQYSTTTSWFTGAGVYHPDMVDQDLFAITNY
FQNKGYADAKVTKEVSTDAKGNLSLVINVDKGPLYTLGHVHIEGFTALSKRLLDKQLLVGPNSLYCPEKVWAGAQKIRNA
YARYGYVNTNVDVSFAVHPTLPVYDVTYRVSEGAPYKIGLIKIKGNTHTKHDVILHETSLFPGDTFDRLKLEDTETRLRN
TGYFKSVSVYTVRSQLDPLDSNNLYRDVFIEVKETETGNLGLFLGFSSIDHLFGGAEISESNFDLFGARHLFKKGFKSLR
GGGEYLFLKANLGDKVTDYTVKWTKPHFLNTPWILGVELDKSINKALSKDYSVDTYGGNISTTYILNDKLKYGMYYRGSQ
TSLSLRKKTENPNKPGPDLDSNKGFVSAAGLNVLYDSIDNPRKPTMGIRSSLNFELSGLGGTYQFTKLTASGSIYRLLTK
KGVLKIRGEAKFIKPFGTTTAQGIPVSERFFLGGESTVRGYKPFIIGPKFSPTEPQGGLSSLLLTEEFQYPLISQPSINA
FVFLDSGFIGTEEYTIRLKNLCSSAGFGLRFDMMNNVPIMLGWGWPFRPTEILNNEKIDVSQRFFFALGGVF

Sequences:

>Translated_792_residues
MLGIRKKTILQLAILLLLPFSQNAFGTSPEGRMVVQSITIETRGENAQNKRAIPKIKTKQGTLFSQTDFDEDLRTLSKDF
DRIDPIVEFRNGQAVISLILTAKPVIRHINISGNEAIPTHKILKTLELYKNDLFDREVFFKNFDALRTLYLKRGYYDSQL
SYSHDHNEQEGYIDISIQIKEGPYGRIKKLTISGITRTEASDLGDIVLTKQYSTTTSWFTGAGVYHPDMVDQDLFAITNY
FQNKGYADAKVTKEVSTDAKGNLSLVINVDKGPLYTLGHVHIEGFTALSKRLLDKQLLVGPNSLYCPEKVWAGAQKIRNA
YARYGYVNTNVDVSFAVHPTLPVYDVTYRVSEGAPYKIGLIKIKGNTHTKHDVILHETSLFPGDTFDRLKLEDTETRLRN
TGYFKSVSVYTVRSQLDPLDSNNLYRDVFIEVKETETGNLGLFLGFSSIDHLFGGAEISESNFDLFGARHLFKKGFKSLR
GGGEYLFLKANLGDKVTDYTVKWTKPHFLNTPWILGVELDKSINKALSKDYSVDTYGGNISTTYILNDKLKYGMYYRGSQ
TSLSLRKKTENPNKPGPDLDSNKGFVSAAGLNVLYDSIDNPRKPTMGIRSSLNFELSGLGGTYQFTKLTASGSIYRLLTK
KGVLKIRGEAKFIKPFGTTTAQGIPVSERFFLGGESTVRGYKPFIIGPKFSPTEPQGGLSSLLLTEEFQYPLISQPSINA
FVFLDSGFIGTEEYTIRLKNLCSSAGFGLRFDMMNNVPIMLGWGWPFRPTEILNNEKIDVSQRFFFALGGVF
>Mature_792_residues
MLGIRKKTILQLAILLLLPFSQNAFGTSPEGRMVVQSITIETRGENAQNKRAIPKIKTKQGTLFSQTDFDEDLRTLSKDF
DRIDPIVEFRNGQAVISLILTAKPVIRHINISGNEAIPTHKILKTLELYKNDLFDREVFFKNFDALRTLYLKRGYYDSQL
SYSHDHNEQEGYIDISIQIKEGPYGRIKKLTISGITRTEASDLGDIVLTKQYSTTTSWFTGAGVYHPDMVDQDLFAITNY
FQNKGYADAKVTKEVSTDAKGNLSLVINVDKGPLYTLGHVHIEGFTALSKRLLDKQLLVGPNSLYCPEKVWAGAQKIRNA
YARYGYVNTNVDVSFAVHPTLPVYDVTYRVSEGAPYKIGLIKIKGNTHTKHDVILHETSLFPGDTFDRLKLEDTETRLRN
TGYFKSVSVYTVRSQLDPLDSNNLYRDVFIEVKETETGNLGLFLGFSSIDHLFGGAEISESNFDLFGARHLFKKGFKSLR
GGGEYLFLKANLGDKVTDYTVKWTKPHFLNTPWILGVELDKSINKALSKDYSVDTYGGNISTTYILNDKLKYGMYYRGSQ
TSLSLRKKTENPNKPGPDLDSNKGFVSAAGLNVLYDSIDNPRKPTMGIRSSLNFELSGLGGTYQFTKLTASGSIYRLLTK
KGVLKIRGEAKFIKPFGTTTAQGIPVSERFFLGGESTVRGYKPFIIGPKFSPTEPQGGLSSLLLTEEFQYPLISQPSINA
FVFLDSGFIGTEEYTIRLKNLCSSAGFGLRFDMMNNVPIMLGWGWPFRPTEILNNEKIDVSQRFFFALGGVF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=649, Percent_Identity=22.0338983050847, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 88825; Mature: 88825

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIRKKTILQLAILLLLPFSQNAFGTSPEGRMVVQSITIETRGENAQNKRAIPKIKTKQ
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEECCC
GTLFSQTDFDEDLRTLSKDFDRIDPIVEFRNGQAVISLILTAKPVIRHINISGNEAIPTH
CCEEECCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHCCCEEEEEECCCCCCCCHH
KILKTLELYKNDLFDREVFFKNFDALRTLYLKRGYYDSQLSYSHDHNEQEGYIDISIQIK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC
EGPYGRIKKLTISGITRTEASDLGDIVLTKQYSTTTSWFTGAGVYHPDMVDQDLFAITNY
CCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FQNKGYADAKVTKEVSTDAKGNLSLVINVDKGPLYTLGHVHIEGFTALSKRLLDKQLLVG
HHCCCCCCCEEEHHHCCCCCCCEEEEEEECCCCEEEEEEEEECHHHHHHHHHHHHHEEEC
PNSLYCPEKVWAGAQKIRNAYARYGYVNTNVDVSFAVHPTLPVYDVTYRVSEGAPYKIGL
CCCCCCCHHHHHHHHHHHHHHHHCCEEECCEEEEEEECCCCCEEEEEEEECCCCCEEEEE
IKIKGNTHTKHDVILHETSLFPGDTFDRLKLEDTETRLRNTGYFKSVSVYTVRSQLDPLD
EEEECCCCCCCEEEEEECCCCCCCCCCCEEECCHHHHHHCCCCEEEEEEEEEECCCCCCC
SNNLYRDVFIEVKETETGNLGLFLGFSSIDHLFGGAEISESNFDLFGARHLFKKGFKSLR
CCCCEEEEEEEEEECCCCCEEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
GGGEYLFLKANLGDKVTDYTVKWTKPHFLNTPWILGVELDKSINKALSKDYSVDTYGGNI
CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCEEECCCCE
STTYILNDKLKYGMYYRGSQTSLSLRKKTENPNKPGPDLDSNKGFVSAAGLNVLYDSIDN
EEEEEEECCEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCC
PRKPTMGIRSSLNFELSGLGGTYQFTKLTASGSIYRLLTKKGVLKIRGEAKFIKPFGTTT
CCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEECCCCCC
AQGIPVSERFFLGGESTVRGYKPFIIGPKFSPTEPQGGLSSLLLTEEFQYPLISQPSINA
CCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCE
FVFLDSGFIGTEEYTIRLKNLCSSAGFGLRFDMMNNVPIMLGWGWPFRPTEILNNEKIDV
EEEEECCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCH
SQRFFFALGGVF
HHHHHHHHCCCC
>Mature Secondary Structure
MLGIRKKTILQLAILLLLPFSQNAFGTSPEGRMVVQSITIETRGENAQNKRAIPKIKTKQ
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEECCC
GTLFSQTDFDEDLRTLSKDFDRIDPIVEFRNGQAVISLILTAKPVIRHINISGNEAIPTH
CCEEECCCCHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHCCCEEEEEECCCCCCCCHH
KILKTLELYKNDLFDREVFFKNFDALRTLYLKRGYYDSQLSYSHDHNEQEGYIDISIQIK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEC
EGPYGRIKKLTISGITRTEASDLGDIVLTKQYSTTTSWFTGAGVYHPDMVDQDLFAITNY
CCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH
FQNKGYADAKVTKEVSTDAKGNLSLVINVDKGPLYTLGHVHIEGFTALSKRLLDKQLLVG
HHCCCCCCCEEEHHHCCCCCCCEEEEEEECCCCEEEEEEEEECHHHHHHHHHHHHHEEEC
PNSLYCPEKVWAGAQKIRNAYARYGYVNTNVDVSFAVHPTLPVYDVTYRVSEGAPYKIGL
CCCCCCCHHHHHHHHHHHHHHHHCCEEECCEEEEEEECCCCCEEEEEEEECCCCCEEEEE
IKIKGNTHTKHDVILHETSLFPGDTFDRLKLEDTETRLRNTGYFKSVSVYTVRSQLDPLD
EEEECCCCCCCEEEEEECCCCCCCCCCCEEECCHHHHHHCCCCEEEEEEEEEECCCCCCC
SNNLYRDVFIEVKETETGNLGLFLGFSSIDHLFGGAEISESNFDLFGARHLFKKGFKSLR
CCCCEEEEEEEEEECCCCCEEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHC
GGGEYLFLKANLGDKVTDYTVKWTKPHFLNTPWILGVELDKSINKALSKDYSVDTYGGNI
CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCEEECCCCE
STTYILNDKLKYGMYYRGSQTSLSLRKKTENPNKPGPDLDSNKGFVSAAGLNVLYDSIDN
EEEEEEECCEEECEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCC
PRKPTMGIRSSLNFELSGLGGTYQFTKLTASGSIYRLLTKKGVLKIRGEAKFIKPFGTTT
CCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEECCCCCC
AQGIPVSERFFLGGESTVRGYKPFIIGPKFSPTEPQGGLSSLLLTEEFQYPLISQPSINA
CCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCE
FVFLDSGFIGTEEYTIRLKNLCSSAGFGLRFDMMNNVPIMLGWGWPFRPTEILNNEKIDV
EEEEECCCCCCCCEEEEEHHHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCH
SQRFFFALGGVF
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]