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The map label for this gene is recR

Identifier: 15835129

GI number: 15835129

Start: 617211

End: 617822

Strand: Direct

Name: recR

Synonym: TC0511

Alternate gene names: 15835129

Gene position: 617211-617822 (Clockwise)

Preceding gene: 15835124

Following gene: 15835130

Centisome position: 57.52

GC content: 35.62

Gene sequence:

>612_bases
TTGAAAGACATGTTAAAATATCCCGACTACATTTCTAAACTCATCTCATTTTTAAAAAAACTACCTGGCATTGGGTTTAA
ATCGGCAGAAAAAATTGCATTTGAATTATTAGAATGGGATCCTTCTCAAGTCGAAGCAATGGGACTGGCAATGCAAGAAT
TTTCTGCTTCGCATGCCACATGCCCAGACTGCTTTTGCTTAAAGACTAGCAAAACTTCCTCTTGTGATTTTTGTAGCGAA
TCTAGAGATTCTTCGTTTTTATGCATCGTTGCAACACCTAAAGACGTCTTTTCTTTTGAAAAATCAAAAATTTTTAAAGG
ACGTTACTTCGTTTTAGGAAATCTCCTTTCCCCTATTACAGGAAAACATCTATCTTTAGAAAAACTAAACATCCTCAAGC
AACGAATAGAAGATTTTGCTCCAAAAGAAATGATTATCGCCCTTGATGCAACATTGGAAGGAGATGCTACAGCCTTGTTT
TTAAAACAAGAGTTCTCCCATCTTCCCATAAAAATTTCTAGATTGGCTCTCGGCATGCCTGTTGGGTTATCTTTTGATTT
TATAGATTCCAACACTCTTGCAAGAGCTTTTTCTGGAAGAAATTGTTTTTAA

Upstream 100 bases:

>100_bases
AAGAAAAAACCGAGTATACTGTTAGAGGAGTTTTATACCCTAACCTTTATTTTGCATCTATCCCCATAATCGATTATCTA
GGTCATGGACCTCAATTGGC

Downstream 100 bases:

>100_bases
GCATTTTTTTGCAAGGAGAAATTCTTTTCAAAAAACACGTTTTGGAATATGCTTGAGTCGGTTTAGTTAGTTTTTTACTA
TCAACCAGCAGCCCCTCTGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKDMLKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFCLKTSKTSSCDFCSE
SRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLSLEKLNILKQRIEDFAPKEMIIALDATLEGDATALF
LKQEFSHLPIKISRLALGMPVGLSFDFIDSNTLARAFSGRNCF

Sequences:

>Translated_203_residues
MKDMLKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFCLKTSKTSSCDFCSE
SRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLSLEKLNILKQRIEDFAPKEMIIALDATLEGDATALF
LKQEFSHLPIKISRLALGMPVGLSFDFIDSNTLARAFSGRNCF
>Mature_203_residues
MKDMLKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHATCPDCFCLKTSKTSSCDFCSE
SRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPITGKHLSLEKLNILKQRIEDFAPKEMIIALDATLEGDATALF
LKQEFSHLPIKISRLALGMPVGLSFDFIDSNTLARAFSGRNCF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=33.160621761658, Blast_Score=124, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22680; Mature: 22680

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDMLKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHAT
CCCHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
CPDCFCLKTSKTSSCDFCSESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPIT
CCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GKHLSLEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMP
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECEECCCCEEEEEEHHHCCCCEEEEHHHCCCC
VGLSFDFIDSNTLARAFSGRNCF
CCCEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKDMLKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQVEAMGLAMQEFSASHAT
CCCHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
CPDCFCLKTSKTSSCDFCSESRDSSFLCIVATPKDVFSFEKSKIFKGRYFVLGNLLSPIT
CCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GKHLSLEKLNILKQRIEDFAPKEMIIALDATLEGDATALFLKQEFSHLPIKISRLALGMP
CCCCCHHHHHHHHHHHHHCCCCEEEEEEECEECCCCEEEEEEHHHCCCCEEEEHHHCCCC
VGLSFDFIDSNTLARAFSGRNCF
CCCEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]