| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835049
GI number: 15835049
Start: 496200
End: 498629
Strand: Reverse
Name: Not Available
Synonym: TC0431
Alternate gene names: NA
Gene position: 498629-496200 (Counterclockwise)
Preceding gene: 15835050
Following gene: 15835045
Centisome position: 46.47
GC content: 39.96
Gene sequence:
>2430_bases ATGCCCCACTCTCCTTTTTTATATGTTGTTCAACCGCATTCTGTTTTTAATCCTAGATTGGGAGAGCGGCACCCTATTAC TTTAGATTTCATCAAAGAAAAGAATCGATTAGCTGATTTTATTGAAAACCTACCTTTAGAAATTTTTGGAGCCCCTTCTT TCTTGGAAAATGCTTCTTTAGAAGCCTCTTATGTCTTGTCTAGGGAATCCACAAAAGATGGCACTCTTTTTACCGTTCTA GAACCCAAACTATCTGCCTGCGTAGCTACTTGCCTTGTGGATTCTTCTATTCCTATGGAGCCCGATAACGAGCTCTTAGA AGAAATTAAACACACTTTGTTGAAAAGCTCTTGTGATGGCGTACAATATCGTGTAACCCGAGAGACTCTCCAAAACAAAG ATGAAGCCCCCAGAGTCTCTTTAGTTGCTGATGATATCGAACTTATCCGCAATGTAGATTTTTTAGGACGTTCCGTTGAT ATTGTAAAATTGGATCCCTTGAATATTCCTAATACCGTAAGCGAGGAGAATGCTCTCGATTACTCTTTCACAAGGGAAAC CGCCAAACTTAGCCCTGACGGACGAGTTGGCATCCCTCAAGGGACAAAAATTTTGCCAGCTCCCTCTCTTGAAGTTGAAA TTAGCACCTCTATTTTTGAGGAAACCTCTTCTTTTGAACAAAACTTTTCTTCCTCTATTACTTTTTGTGTACCACCTCTT ACCTCTTTTTCTCCTTTGCAAGAACCTCCTCTAGTGGGAGCTGGACAGCAGGAAATTCTTGTGACTAAAAAGCACTTATT CCCTAGCTATACCCCTAAACTTATTGATATTGTCAAACGACACAAAAGAGACGCAAAGATTCTAGTAAACAAGATCCAGT TCGAGAAACTATGGAGAAGTCATGCCAAAAGTCAAATCTTAAAAGAAGGCTCTGTTCGCTTGGATTTACAAGGATTTACA GGGGAGCTGTTTAACTACCAACTTCAAGTAGGATCTCATACAATTGCAGCCGTGTTAATTGATCCGGAAATTGCTAACGT CAAATCCCTCCCCGAACAAACTTACGCTGTAAGAAAAATTAAATCAGGGTTCCAATGTAGTTTGGATGACCAACACATTT ATCAAGTCGCAGTAAAAAAACATCTTTCTCTGTCTTCACAACCTCCGAAGATATCTCCGTTATCTCAATCCGAAAGCTCC GATTTAAGTCTCTTTGAAGCAGCAGCGTTTTCAGCAAGCCTAACTTACGAGTTCGTAAAGAAAAATACATATCATGCTAA GAATACTGTAACTTGCTCCACGGTATCGCACTCTCTGTATATTCTCAAAGAAGATGACGGGGCTAATGCTGCAGAAAAAC GCTTAGACAACAGTTTCCGAAACTGGGTCGAAAATAAGTTGAACGCAAATTCTCCAGATTCTTGTACTGCATTTATTCAA AAATTCGGCACACATTACATCACATCGGCAACTTTTGGAGGATCTGGGTTCCAAGTTCTTAAATTATCCTTTGAACAGGT AGAAGGCCTCCGTAGTAAGAAGATCTCCCTAGAAGCAGCAGCAGCAAATTCCTTATTAAAAAGCTCTGTGTCAAACAGCA CGGAATCTGGCTACTCTACTTACGATTCCTCTTCTTCTTCTCATACAGTATTCCTAGGGGGCACTGTATTACCCTCTGTT CATGATGGACAGTTAGATTTTAAAGATTGGTCTGAAAGTGTCTGTTTAGAACCTGTTCCCATTCACATTTCTTTACTCCC CTTAACAGACTTGCTCACCCCTCTTTATTTTCCTGAAACGGATACAACCGAACTATCTAATAAACGTAATGCTCTCCAAC AAGCGGTTCGAGTTTACCTTAAAGACCATCGTTCAGCTAAACAAAGCGAACGCTCCGTATTCACAGCGGGGATCAATAGT CCTTCTTCCTGGTTCACATTAGAATCTGCTAATTCACCTCTTGTTGTGAGTTCTCCTTACATGACGTATTGGTCTACTCT CCCCTATCTCTTCCCCACATTAAAAGAGCGTTCTTCAGCAGCTCCCATCGTTTTTTATTTTTGTGTGGATAATAATGAAC ACGCCTCCCAAAAAATTTTAAACCAAACATATTGCTTCATAGGTTCTTTACCTATTCGACAAAAGATTTTTGGCAGAGAA TTTGCTGAGAATCCTTATTTATCTTTCTATGGAAGGTTTGGAGAAGCTTATTTTGATGGCGGTTATCCAGAACGTTGTGG ATGGATTGTTGAAAAGTTAAATACTACTAAAGATCAAATTCTCCGCGATGAGGATGAAGTGCAACTAAAGCATGTTTATA GCGGAGAGTATCTGTCTACAATTCCTATTAAGGATTCCCATTGCACACTCTCGCGTACATGCACCGAATCGAATGCTGTT TTTATTATCAAAAAACCTTCGAGCTATTGA
Upstream 100 bases:
>100_bases CTCCCTTACCACCATGTAATATCTTTTCTATTTCTTTGCTTTTCTTAAAAAGATAATCTTTTCATTATGAGCTGTCTTAT TATTTAATCGGAGCCCTCTA
Downstream 100 bases:
>100_bases CGGAGAACGATTTACAGATCTCATACTTTTGTGTTAAAATTGCTCTGTAGGTGTGTTAAGTAAGGGTATAAGGCTCTTAA TAATTCCCGGATGGAAGGGT
Product: MAC/perforin family protein
Products: NA
Alternate protein names: Phospholipase D Endonuclease
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MPHSPFLYVVQPHSVFNPRLGERHPITLDFIKEKNRLADFIENLPLEIFGAPSFLENASLEASYVLSRESTKDGTLFTVL EPKLSACVATCLVDSSIPMEPDNELLEEIKHTLLKSSCDGVQYRVTRETLQNKDEAPRVSLVADDIELIRNVDFLGRSVD IVKLDPLNIPNTVSEENALDYSFTRETAKLSPDGRVGIPQGTKILPAPSLEVEISTSIFEETSSFEQNFSSSITFCVPPL TSFSPLQEPPLVGAGQQEILVTKKHLFPSYTPKLIDIVKRHKRDAKILVNKIQFEKLWRSHAKSQILKEGSVRLDLQGFT GELFNYQLQVGSHTIAAVLIDPEIANVKSLPEQTYAVRKIKSGFQCSLDDQHIYQVAVKKHLSLSSQPPKISPLSQSESS DLSLFEAAAFSASLTYEFVKKNTYHAKNTVTCSTVSHSLYILKEDDGANAAEKRLDNSFRNWVENKLNANSPDSCTAFIQ KFGTHYITSATFGGSGFQVLKLSFEQVEGLRSKKISLEAAAANSLLKSSVSNSTESGYSTYDSSSSSHTVFLGGTVLPSV HDGQLDFKDWSESVCLEPVPIHISLLPLTDLLTPLYFPETDTTELSNKRNALQQAVRVYLKDHRSAKQSERSVFTAGINS PSSWFTLESANSPLVVSSPYMTYWSTLPYLFPTLKERSSAAPIVFYFCVDNNEHASQKILNQTYCFIGSLPIRQKIFGRE FAENPYLSFYGRFGEAYFDGGYPERCGWIVEKLNTTKDQILRDEDEVQLKHVYSGEYLSTIPIKDSHCTLSRTCTESNAV FIIKKPSSY
Sequences:
>Translated_809_residues MPHSPFLYVVQPHSVFNPRLGERHPITLDFIKEKNRLADFIENLPLEIFGAPSFLENASLEASYVLSRESTKDGTLFTVL EPKLSACVATCLVDSSIPMEPDNELLEEIKHTLLKSSCDGVQYRVTRETLQNKDEAPRVSLVADDIELIRNVDFLGRSVD IVKLDPLNIPNTVSEENALDYSFTRETAKLSPDGRVGIPQGTKILPAPSLEVEISTSIFEETSSFEQNFSSSITFCVPPL TSFSPLQEPPLVGAGQQEILVTKKHLFPSYTPKLIDIVKRHKRDAKILVNKIQFEKLWRSHAKSQILKEGSVRLDLQGFT GELFNYQLQVGSHTIAAVLIDPEIANVKSLPEQTYAVRKIKSGFQCSLDDQHIYQVAVKKHLSLSSQPPKISPLSQSESS DLSLFEAAAFSASLTYEFVKKNTYHAKNTVTCSTVSHSLYILKEDDGANAAEKRLDNSFRNWVENKLNANSPDSCTAFIQ KFGTHYITSATFGGSGFQVLKLSFEQVEGLRSKKISLEAAAANSLLKSSVSNSTESGYSTYDSSSSSHTVFLGGTVLPSV HDGQLDFKDWSESVCLEPVPIHISLLPLTDLLTPLYFPETDTTELSNKRNALQQAVRVYLKDHRSAKQSERSVFTAGINS PSSWFTLESANSPLVVSSPYMTYWSTLPYLFPTLKERSSAAPIVFYFCVDNNEHASQKILNQTYCFIGSLPIRQKIFGRE FAENPYLSFYGRFGEAYFDGGYPERCGWIVEKLNTTKDQILRDEDEVQLKHVYSGEYLSTIPIKDSHCTLSRTCTESNAV FIIKKPSSY >Mature_808_residues PHSPFLYVVQPHSVFNPRLGERHPITLDFIKEKNRLADFIENLPLEIFGAPSFLENASLEASYVLSRESTKDGTLFTVLE PKLSACVATCLVDSSIPMEPDNELLEEIKHTLLKSSCDGVQYRVTRETLQNKDEAPRVSLVADDIELIRNVDFLGRSVDI VKLDPLNIPNTVSEENALDYSFTRETAKLSPDGRVGIPQGTKILPAPSLEVEISTSIFEETSSFEQNFSSSITFCVPPLT SFSPLQEPPLVGAGQQEILVTKKHLFPSYTPKLIDIVKRHKRDAKILVNKIQFEKLWRSHAKSQILKEGSVRLDLQGFTG ELFNYQLQVGSHTIAAVLIDPEIANVKSLPEQTYAVRKIKSGFQCSLDDQHIYQVAVKKHLSLSSQPPKISPLSQSESSD LSLFEAAAFSASLTYEFVKKNTYHAKNTVTCSTVSHSLYILKEDDGANAAEKRLDNSFRNWVENKLNANSPDSCTAFIQK FGTHYITSATFGGSGFQVLKLSFEQVEGLRSKKISLEAAAANSLLKSSVSNSTESGYSTYDSSSSSHTVFLGGTVLPSVH DGQLDFKDWSESVCLEPVPIHISLLPLTDLLTPLYFPETDTTELSNKRNALQQAVRVYLKDHRSAKQSERSVFTAGINSP SSWFTLESANSPLVVSSPYMTYWSTLPYLFPTLKERSSAAPIVFYFCVDNNEHASQKILNQTYCFIGSLPIRQKIFGREF AENPYLSFYGRFGEAYFDGGYPERCGWIVEKLNTTKDQILRDEDEVQLKHVYSGEYLSTIPIKDSHCTLSRTCTESNAVF IIKKPSSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90361; Mature: 90230
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSPFLYVVQPHSVFNPRLGERHPITLDFIKEKNRLADFIENLPLEIFGAPSFLENASL CCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCC EASYVLSRESTKDGTLFTVLEPKLSACVATCLVDSSIPMEPDNELLEEIKHTLLKSSCDG CEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC VQYRVTRETLQNKDEAPRVSLVADDIELIRNVDFLGRSVDIVKLDPLNIPNTVSEENALD CEEEEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC YSFTRETAKLSPDGRVGIPQGTKILPAPSLEVEISTSIFEETSSFEQNFSSSITFCVPPL EEECCHHHCCCCCCCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCC TSFSPLQEPPLVGAGQQEILVTKKHLFPSYTPKLIDIVKRHKRDAKILVNKIQFEKLWRS CCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH HAKSQILKEGSVRLDLQGFTGELFNYQLQVGSHTIAAVLIDPEIANVKSLPEQTYAVRKI HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEEECCCHHHHHHCHHHHHHHHHH KSGFQCSLDDQHIYQVAVKKHLSLSSQPPKISPLSQSESSDLSLFEAAAFSASLTYEFVK CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KNTYHAKNTVTCSTVSHSLYILKEDDGANAAEKRLDNSFRNWVENKLNANSPDSCTAFIQ CCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KFGTHYITSATFGGSGFQVLKLSFEQVEGLRSKKISLEAAAANSLLKSSVSNSTESGYST HHCCCEEEEEEECCCCCEEEEEEHHHHCCHHHHCEEEHHHHHHHHHHHHHCCCCCCCCCC YDSSSSSHTVFLGGTVLPSVHDGQLDFKDWSESVCLEPVPIHISLLPLTDLLTPLYFPET CCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC DTTELSNKRNALQQAVRVYLKDHRSAKQSERSVFTAGINSPSSWFTLESANSPLVVSSPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCEEEECCC MTYWSTLPYLFPTLKERSSAAPIVFYFCVDNNEHASQKILNQTYCFIGSLPIRQKIFGRE HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH FAENPYLSFYGRFGEAYFDGGYPERCGWIVEKLNTTKDQILRDEDEVQLKHVYSGEYLST HCCCCCEEEHHHHCCHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCEEEE IPIKDSHCTLSRTCTESNAVFIIKKPSSY ECCCCCCCEEEEEECCCCCEEEEECCCCC >Mature Secondary Structure PHSPFLYVVQPHSVFNPRLGERHPITLDFIKEKNRLADFIENLPLEIFGAPSFLENASL CCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCC EASYVLSRESTKDGTLFTVLEPKLSACVATCLVDSSIPMEPDNELLEEIKHTLLKSSCDG CEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC VQYRVTRETLQNKDEAPRVSLVADDIELIRNVDFLGRSVDIVKLDPLNIPNTVSEENALD CEEEEEHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC YSFTRETAKLSPDGRVGIPQGTKILPAPSLEVEISTSIFEETSSFEQNFSSSITFCVPPL EEECCHHHCCCCCCCCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEECCC TSFSPLQEPPLVGAGQQEILVTKKHLFPSYTPKLIDIVKRHKRDAKILVNKIQFEKLWRS CCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH HAKSQILKEGSVRLDLQGFTGELFNYQLQVGSHTIAAVLIDPEIANVKSLPEQTYAVRKI HHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCEEEEEEECCCHHHHHHCHHHHHHHHHH KSGFQCSLDDQHIYQVAVKKHLSLSSQPPKISPLSQSESSDLSLFEAAAFSASLTYEFVK CCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KNTYHAKNTVTCSTVSHSLYILKEDDGANAAEKRLDNSFRNWVENKLNANSPDSCTAFIQ CCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KFGTHYITSATFGGSGFQVLKLSFEQVEGLRSKKISLEAAAANSLLKSSVSNSTESGYST HHCCCEEEEEEECCCCCEEEEEEHHHHCCHHHHCEEEHHHHHHHHHHHHHCCCCCCCCCC YDSSSSSHTVFLGGTVLPSVHDGQLDFKDWSESVCLEPVPIHISLLPLTDLLTPLYFPET CCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCC DTTELSNKRNALQQAVRVYLKDHRSAKQSERSVFTAGINSPSSWFTLESANSPLVVSSPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCEEEECCC MTYWSTLPYLFPTLKERSSAAPIVFYFCVDNNEHASQKILNQTYCFIGSLPIRQKIFGRE HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH FAENPYLSFYGRFGEAYFDGGYPERCGWIVEKLNTTKDQILRDEDEVQLKHVYSGEYLST HCCCCCEEEHHHHCCHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCEEEE IPIKDSHCTLSRTCTESNAVFIIKKPSSY ECCCCCCCEEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA