| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835050
GI number: 15835050
Start: 498808
End: 499743
Strand: Reverse
Name: Not Available
Synonym: TC0432
Alternate gene names: NA
Gene position: 499743-498808 (Counterclockwise)
Preceding gene: 15835051
Following gene: 15835049
Centisome position: 46.58
GC content: 40.17
Gene sequence:
>936_bases TTGTCAGTCATTTGTAAGCTTATGAACCAGGCCTGTAGCAGTCTGTTCATTCAAGTATACAGATTCACACACCCCACAAT TATTCAACACGCTTTAAATGTTGCTGCAAAAGATGTTCGGACAACTGTTCTATTTAGGGATGGAGATGAACTTATATCGG CTGCTCAAAACTCTTCGATTATCCTGCAACAACAACCCGGCCGATCTCTATTCCACAGAAAATCGCTGGTTGTTGATAAC AAAAAATTATTCATAAGTACCGGGAACTTCACCATAAATTCTACTGAGCAAGACATCAATCTCTCAGCTATTTTCAAAGA TGCTATGTTGGCGACTCGAGTAGCATGCAGTCAATCCTTCACCGGTATTATTGGAAGTCAGTTAGTTTCCTATCTCCCTA TTTATCGACGCTCCCAGAAAAGCAGTCAAATAGGAATCCATCTTGTCCAGGATCTTATTCAGAACGCAAAATCAAATATT CTTATTGCTATGTACATCCTTTCCCATCCCGGAATTCTTCAAGCTCTTCAAGCTGCCGCTGAAAGGGGTGTAAAAGTAGA AGTAGCTGTCGATACTCGTGAAAGCAAACAGACTCAGAGGACATTAGAACGATTACAACTTTCCCTTCCACTTCGTGTAC GCAAGCCTGGAAGCCCACCTTTGCATGTCAAAATGTGTTGTATTGACAACAAAATTTTAATTATTGGATCTTCTAATTGG TCATTCGTAGGACTGGCAAGAAATACCGAAGATTTGTTTGTCATTAGAGGTCTAACAGAAACTCAATGCCAATCCTTATC AGAAATATGGCAATCTGTGCAAGAAAACACACAACCTGTGAAACGTTCTAGAGAAGAAGAGGAAGATCCTCTAGAAGGAA CTTCGACTAGTCAAGAAGATCTTTCTCCTCCGACTAAAAAGAGAAGAATTCAGTGA
Upstream 100 bases:
>100_bases CCTTAAAGCACGTAGGACTGGGAGCAGCGTACCCAGACCCGTTGCACAACAAGAACTTATTACCTTCGTTTCTGCTCAGC AAAAAACACATAGCAATCCT
Downstream 100 bases:
>100_bases ATTCTGTAATCTCAAAAAAGGGATCCCTTGTTAAGGCGATCCTTTTTTGATAAAAGATATTTTCCTGCGGCAGATACTCT CCCTTACCACCATGTAATAT
Product: phospholipase D family protein
Products: NA
Alternate protein names: Phospholipase D Endonuclease Superfamily Protein; Phosphatidylcholine-Hydrolyzing Phospholipase D Protein; Phospholipase D/Transphosphatidylase; Phospholipase D; Cardiolipin Synthetase; Phopholipase D Superfamily Protein; Phopholipase D
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSVICKLMNQACSSLFIQVYRFTHPTIIQHALNVAAKDVRTTVLFRDGDELISAAQNSSIILQQQPGRSLFHRKSLVVDN KKLFISTGNFTINSTEQDINLSAIFKDAMLATRVACSQSFTGIIGSQLVSYLPIYRRSQKSSQIGIHLVQDLIQNAKSNI LIAMYILSHPGILQALQAAAERGVKVEVAVDTRESKQTQRTLERLQLSLPLRVRKPGSPPLHVKMCCIDNKILIIGSSNW SFVGLARNTEDLFVIRGLTETQCQSLSEIWQSVQENTQPVKRSREEEEDPLEGTSTSQEDLSPPTKKRRIQ
Sequences:
>Translated_311_residues MSVICKLMNQACSSLFIQVYRFTHPTIIQHALNVAAKDVRTTVLFRDGDELISAAQNSSIILQQQPGRSLFHRKSLVVDN KKLFISTGNFTINSTEQDINLSAIFKDAMLATRVACSQSFTGIIGSQLVSYLPIYRRSQKSSQIGIHLVQDLIQNAKSNI LIAMYILSHPGILQALQAAAERGVKVEVAVDTRESKQTQRTLERLQLSLPLRVRKPGSPPLHVKMCCIDNKILIIGSSNW SFVGLARNTEDLFVIRGLTETQCQSLSEIWQSVQENTQPVKRSREEEEDPLEGTSTSQEDLSPPTKKRRIQ >Mature_310_residues SVICKLMNQACSSLFIQVYRFTHPTIIQHALNVAAKDVRTTVLFRDGDELISAAQNSSIILQQQPGRSLFHRKSLVVDNK KLFISTGNFTINSTEQDINLSAIFKDAMLATRVACSQSFTGIIGSQLVSYLPIYRRSQKSSQIGIHLVQDLIQNAKSNIL IAMYILSHPGILQALQAAAERGVKVEVAVDTRESKQTQRTLERLQLSLPLRVRKPGSPPLHVKMCCIDNKILIIGSSNWS FVGLARNTEDLFVIRGLTETQCQSLSEIWQSVQENTQPVKRSREEEEDPLEGTSTSQEDLSPPTKKRRIQ
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34803; Mature: 34671
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVICKLMNQACSSLFIQVYRFTHPTIIQHALNVAAKDVRTTVLFRDGDELISAAQNSSI CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCCEE ILQQQPGRSLFHRKSLVVDNKKLFISTGNFTINSTEQDINLSAIFKDAMLATRVACSQSF EEEECCCHHHHHHHHEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TGIIGSQLVSYLPIYRRSQKSSQIGIHLVQDLIQNAKSNILIAMYILSHPGILQALQAAA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH ERGVKVEVAVDTRESKQTQRTLERLQLSLPLRVRKPGSPPLHVKMCCIDNKILIIGSSNW HCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCEEEEEECCCC SFVGLARNTEDLFVIRGLTETQCQSLSEIWQSVQENTQPVKRSREEEEDPLEGTSTSQED EEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHH LSPPTKKRRIQ CCCCCHHCCCC >Mature Secondary Structure SVICKLMNQACSSLFIQVYRFTHPTIIQHALNVAAKDVRTTVLFRDGDELISAAQNSSI HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCHHHHHHCCCCEE ILQQQPGRSLFHRKSLVVDNKKLFISTGNFTINSTEQDINLSAIFKDAMLATRVACSQSF EEEECCCHHHHHHHHEEEECCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH TGIIGSQLVSYLPIYRRSQKSSQIGIHLVQDLIQNAKSNILIAMYILSHPGILQALQAAA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH ERGVKVEVAVDTRESKQTQRTLERLQLSLPLRVRKPGSPPLHVKMCCIDNKILIIGSSNW HCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCEEEEEECCCC SFVGLARNTEDLFVIRGLTETQCQSLSEIWQSVQENTQPVKRSREEEEDPLEGTSTSQED EEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHH LSPPTKKRRIQ CCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA