| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835037
GI number: 15835037
Start: 479620
End: 480462
Strand: Direct
Name: Not Available
Synonym: TC0419
Alternate gene names: NA
Gene position: 479620-480462 (Clockwise)
Preceding gene: 15835036
Following gene: 15835038
Centisome position: 44.7
GC content: 40.45
Gene sequence:
>843_bases ATGAGTGCTTCTGACAAAATTATTAATGATTGTCGGTTTGACTTTGATACAACTGTTCATGGAGATCTGTTAGCTTCAAA TTTAACTACTGAAGGTGACATTACAGCAAAAACGGTTTCTGCAACCGAGACCTTTTCTGTAGGAAGAGATGTTGACGTGA AAACAAAGGACATCGTTGTTGACGGTCTTACTGGAGCCGGGGGGTATGATCTAACAACTCAAGGCAAAATTTCAATCAAT CTTAAAGGGAATCGACTTAGCAATGTCAAACGCCCTGTAAATGATACAGAACCTGTCCCTGCGAATTACATCCGAACTCC AGAATATTTTTTCTGTTCACTGAAATATGGAGCAAGAATCGAATGGAGCCAAGGATCAATTCTTCCTCTAGTAGGGCCTT CACGGCTGGTTTACCAATCGTCTCGCATTGGTAAATTTATCCGTTTTGCAGATTTCAGCGTCAATAATAATAGCATAAAA GTAGATCCGACAGGAACCAAAGGGCTACAACTACTATCTAGAGGGTTGTATATAATCAATGTAGGTATAGGAAAACGCTG GGGATGGAACAATGGATATGGGGGAGATTACTGCTTAGGAATACCTGGAGGAGTGGGATATAGTGAGAGTTCTACGTTCA GTAGAGGAGGGTACTATGCATCTACTGCTGTAGGAACAGCTATTCATATAAGAAATAAGCTGGCTAATCCAGATGAGATT CCTATAGCTGATCAAGAGGCAATGAAGACACTTTTGGAAATACGTTACACGAGTAAAGACGATTATTCCATCTTGTCTAC TTTTTATCTTGGAGTGCTCGTATACCCAGAAGTAGGAGAATAG
Upstream 100 bases:
>100_bases TTTTTTGTTTCAACTTTCTTTTAAAAATAAAAACTAAATTATTTTTTGACTTCTATTTATTAGTTTGTTTTTTATTCAAA ATAAAAACTTGGAACAATAA
Downstream 100 bases:
>100_bases TTATGAAGAAAAATTTTTTAAAAGGAGTTGTTCCTATTCCCGGTTTGAGCACAGATGAGGGAACGGGGGTTAAAGATCAA AACTTATGGCTAAACAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSASDKIINDCRFDFDTTVHGDLLASNLTTEGDITAKTVSATETFSVGRDVDVKTKDIVVDGLTGAGGYDLTTQGKISIN LKGNRLSNVKRPVNDTEPVPANYIRTPEYFFCSLKYGARIEWSQGSILPLVGPSRLVYQSSRIGKFIRFADFSVNNNSIK VDPTGTKGLQLLSRGLYIINVGIGKRWGWNNGYGGDYCLGIPGGVGYSESSTFSRGGYYASTAVGTAIHIRNKLANPDEI PIADQEAMKTLLEIRYTSKDDYSILSTFYLGVLVYPEVGE
Sequences:
>Translated_280_residues MSASDKIINDCRFDFDTTVHGDLLASNLTTEGDITAKTVSATETFSVGRDVDVKTKDIVVDGLTGAGGYDLTTQGKISIN LKGNRLSNVKRPVNDTEPVPANYIRTPEYFFCSLKYGARIEWSQGSILPLVGPSRLVYQSSRIGKFIRFADFSVNNNSIK VDPTGTKGLQLLSRGLYIINVGIGKRWGWNNGYGGDYCLGIPGGVGYSESSTFSRGGYYASTAVGTAIHIRNKLANPDEI PIADQEAMKTLLEIRYTSKDDYSILSTFYLGVLVYPEVGE >Mature_279_residues SASDKIINDCRFDFDTTVHGDLLASNLTTEGDITAKTVSATETFSVGRDVDVKTKDIVVDGLTGAGGYDLTTQGKISINL KGNRLSNVKRPVNDTEPVPANYIRTPEYFFCSLKYGARIEWSQGSILPLVGPSRLVYQSSRIGKFIRFADFSVNNNSIKV DPTGTKGLQLLSRGLYIINVGIGKRWGWNNGYGGDYCLGIPGGVGYSESSTFSRGGYYASTAVGTAIHIRNKLANPDEIP IADQEAMKTLLEIRYTSKDDYSILSTFYLGVLVYPEVGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30519; Mature: 30387
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASDKIINDCRFDFDTTVHGDLLASNLTTEGDITAKTVSATETFSVGRDVDVKTKDIVV CCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCEEECCCCCCCCCEEEEEE DGLTGAGGYDLTTQGKISINLKGNRLSNVKRPVNDTEPVPANYIRTPEYFFCSLKYGARI ECCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEE EWSQGSILPLVGPSRLVYQSSRIGKFIRFADFSVNNNSIKVDPTGTKGLQLLSRGLYIIN EECCCCEEEEECCCCEEEECHHHCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCEEEEE VGIGKRWGWNNGYGGDYCLGIPGGVGYSESSTFSRGGYYASTAVGTAIHIRNKLANPDEI ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEHHHHCEEEEEHHHCCCCCCC PIADQEAMKTLLEIRYTSKDDYSILSTFYLGVLVYPEVGE CCCCHHHHHHHHHEECCCCCCHHHHHHHHHHEEEECCCCC >Mature Secondary Structure SASDKIINDCRFDFDTTVHGDLLASNLTTEGDITAKTVSATETFSVGRDVDVKTKDIVV CCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCEEECCCCCCCCCEEEEEE DGLTGAGGYDLTTQGKISINLKGNRLSNVKRPVNDTEPVPANYIRTPEYFFCSLKYGARI ECCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEE EWSQGSILPLVGPSRLVYQSSRIGKFIRFADFSVNNNSIKVDPTGTKGLQLLSRGLYIIN EECCCCEEEEECCCCEEEECHHHCCEEEEEEEEECCCEEEECCCCCHHHHHHHCCEEEEE VGIGKRWGWNNGYGGDYCLGIPGGVGYSESSTFSRGGYYASTAVGTAIHIRNKLANPDEI ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEHHHHCEEEEEHHHCCCCCCC PIADQEAMKTLLEIRYTSKDDYSILSTFYLGVLVYPEVGE CCCCHHHHHHHHHEECCCCCCHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA