Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15835038

GI number: 15835038

Start: 480465

End: 481304

Strand: Direct

Name: Not Available

Synonym: TC0420

Alternate gene names: NA

Gene position: 480465-481304 (Clockwise)

Preceding gene: 15835037

Following gene: 15835039

Centisome position: 44.78

GC content: 40.48

Gene sequence:

>840_bases
ATGAAGAAAAATTTTTTAAAAGGAGTTGTTCCTATTCCCGGTTTGAGCACAGATGAGGGAACGGGGGTTAAAGATCAAAA
CTTATGGCTAAACAATGCAACTCTCAATGTAAGGGGTGATGCTACCGTTGAAGACAAGGTAACTGGACGAGATTTGAATG
TGACAGGTCCTAAAATACAAACAGATGTTGATCTATCGGTAGGAAGAGATGTTAAAGGAGGGCGAACTGAACTTGGAGAA
ACGGTTCTGAAAGGAGATTTTAGCATCAAGTGTGATATGGGACAAGCCCCTCAGTTTACAAACTTGAGTGATCCTCTTTC
AGCAAGAGATGCGATTACGTTTGACTATTATCGAGATAGGTCTACGCAAGCCTATAATTGCGTAACTGGATATAGGGTGT
CCGTTGCAGGAGAGAGTTTTCTTGATCTGCATGCGAACAATAGCAGAGACGTAGAGTCGTTTACTCCTATGTATCGAAAC
AGATTCTATTGGAACGGCAATGATAAACAAAGGCTATACTTAAAAAGTCCTGGAATTTACCAGGTAGCTTTTCAGATATT
GCGCAATTCGGGATATCACGCAGGGAATGACGACCCAACTGTCTTCTTAAGGTTATATACTTCCGAATATGAATACACAA
ATCTCTGTACAGGAGACACAAGAGGATTCTCTCAGGGTAATACGACCAACACTTCTTTGTATTCCATATTTTCTATCCCG
TCCATAGGAGACGAGATGCCATTTGTACGTGTCTTTACTAAAATTTATATTGATATAGCTCGTACAATGATTAACGTGAT
CTGGTTCCCATTCGGGTCTTCTTATACGGAGGAGGATTAA

Upstream 100 bases:

>100_bases
AGACACTTTTGGAAATACGTTACACGAGTAAAGACGATTATTCCATCTTGTCTACTTTTTATCTTGGAGTGCTCGTATAC
CCAGAAGTAGGAGAATAGTT

Downstream 100 bases:

>100_bases
ATGACGACTCCTACAAATAATAACACCGATGTTTCTTTCCCAACATTTGTGCGTTTGAATATAGAGACGTTAGGGCTAAA
CGAAGAAAAAAAGAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKKNFLKGVVPIPGLSTDEGTGVKDQNLWLNNATLNVRGDATVEDKVTGRDLNVTGPKIQTDVDLSVGRDVKGGRTELGE
TVLKGDFSIKCDMGQAPQFTNLSDPLSARDAITFDYYRDRSTQAYNCVTGYRVSVAGESFLDLHANNSRDVESFTPMYRN
RFYWNGNDKQRLYLKSPGIYQVAFQILRNSGYHAGNDDPTVFLRLYTSEYEYTNLCTGDTRGFSQGNTTNTSLYSIFSIP
SIGDEMPFVRVFTKIYIDIARTMINVIWFPFGSSYTEED

Sequences:

>Translated_279_residues
MKKNFLKGVVPIPGLSTDEGTGVKDQNLWLNNATLNVRGDATVEDKVTGRDLNVTGPKIQTDVDLSVGRDVKGGRTELGE
TVLKGDFSIKCDMGQAPQFTNLSDPLSARDAITFDYYRDRSTQAYNCVTGYRVSVAGESFLDLHANNSRDVESFTPMYRN
RFYWNGNDKQRLYLKSPGIYQVAFQILRNSGYHAGNDDPTVFLRLYTSEYEYTNLCTGDTRGFSQGNTTNTSLYSIFSIP
SIGDEMPFVRVFTKIYIDIARTMINVIWFPFGSSYTEED
>Mature_279_residues
MKKNFLKGVVPIPGLSTDEGTGVKDQNLWLNNATLNVRGDATVEDKVTGRDLNVTGPKIQTDVDLSVGRDVKGGRTELGE
TVLKGDFSIKCDMGQAPQFTNLSDPLSARDAITFDYYRDRSTQAYNCVTGYRVSVAGESFLDLHANNSRDVESFTPMYRN
RFYWNGNDKQRLYLKSPGIYQVAFQILRNSGYHAGNDDPTVFLRLYTSEYEYTNLCTGDTRGFSQGNTTNTSLYSIFSIP
SIGDEMPFVRVFTKIYIDIARTMINVIWFPFGSSYTEED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31372; Mature: 31372

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNFLKGVVPIPGLSTDEGTGVKDQNLWLNNATLNVRGDATVEDKVTGRDLNVTGPKIQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEECCCCCCCEEECCCCCEE
TDVDLSVGRDVKGGRTELGETVLKGDFSIKCDMGQAPQFTNLSDPLSARDAITFDYYRDR
EEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCC
STQAYNCVTGYRVSVAGESFLDLHANNSRDVESFTPMYRNRFYWNGNDKQRLYLKSPGIY
CCCEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCEEEECCCCCEEEEEECCCHH
QVAFQILRNSGYHAGNDDPTVFLRLYTSEYEYTNLCTGDTRGFSQGNTTNTSLYSIFSIP
HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC
SIGDEMPFVRVFTKIYIDIARTMINVIWFPFGSSYTEED
CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
>Mature Secondary Structure
MKKNFLKGVVPIPGLSTDEGTGVKDQNLWLNNATLNVRGDATVEDKVTGRDLNVTGPKIQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCEECCCCCCCEEECCCCCEE
TDVDLSVGRDVKGGRTELGETVLKGDFSIKCDMGQAPQFTNLSDPLSARDAITFDYYRDR
EEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCC
STQAYNCVTGYRVSVAGESFLDLHANNSRDVESFTPMYRNRFYWNGNDKQRLYLKSPGIY
CCCEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCEEEECCCCCEEEEEECCCHH
QVAFQILRNSGYHAGNDDPTVFLRLYTSEYEYTNLCTGDTRGFSQGNTTNTSLYSIFSIP
HHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEECC
SIGDEMPFVRVFTKIYIDIARTMINVIWFPFGSSYTEED
CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA