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The map label for this gene is tig

Identifier: 15834705

GI number: 15834705

Start: 92932

End: 94233

Strand: Reverse

Name: tig

Synonym: TC0080

Alternate gene names: 15834705

Gene position: 94233-92932 (Counterclockwise)

Preceding gene: 15834711

Following gene: 15834704

Centisome position: 8.78

GC content: 39.55

Gene sequence:

>1302_bases
TTGTTTTCTATAAATATCGAAGAAACCGCAGGCTGCGTTGTATCAGCAAAAGTCCAGGCCAATCCCTTGGTCACTCAAAA
ATGTCATAAAGAAGCTCTCAAGACTGTTAAAAAGAATGTAGTATTGCCCGGTTTTCGTAAAGGGAAAGCTCCTGATAATA
TTATTGAAGCTCGCTACGCGACTCAAGTTGAGCAAGAACTTCGACGTTTTTTGCTTCGCGCTTCTTTCGAAGCTCTTTCA
CAAATGTGTGATCGAAAGCCGTTATCTCCAAAAGCAGTTCGTTCTTCTACAGTTGACTCTTGTAATGCTGCGGACGGGGG
CGTTGTTTCTTTCCTATACGAAGCGTTCCCAGTTATTCCATCTCTTCCATGGGAACAATTGAATCTTTCAGACCCAGAGC
CTGTAAAAGAAATCTCCGACGAAGATTTAGAGAATGGCTTAAAAAATGTTGCTTACTTTTTTGCAACAAAAACCCCTGTT
ACAAGACCTTCTCAAGAAGGCGACTTCATCTCCTTATCTCTACATGTGTCTAAAAAGGGAGATCTTAACTCAAATCCAGT
TGCTATTTTTGAAAACAAATATTTCAAAATTAGCGAAGAGGATATGACAGACGCTTTTAAAGCTAGATTTTTAAATGTGT
CCACAGGCCATCGTGTGGAAGAAGAGATTGCTTCTGAGGATATTCAATCCTTTTTAAACGGAGATCTTCTTACTTTCACA
GTCAACGCTGTTATTGAAATTTCGTCCCCAGAAATGGATGATGAAAAAGCTCGGCAGTTGCAAGCAGAATCTCTAGAAGA
TTTGAAGAAAAAACTTCGTATACAGCTAGAAAACCAGGCTAAGGAAGAGCATCATCAAAAACGCTTTTCTGCTGCAGAAG
ATGCTTTAGCTCAGCTCATCGATTTTGACCTGCCGCAAAGTTTGTTACAGGAACGCGAAGAAATTCTCTCTAGAGAAAAA
CTTTTAAATGCCCGGTTGGTTAAGTATTGCTCAGACTCTGAACTAGAAGAACAAAAACAAACCTTACTAGAAGAAGCAAA
AGCAGATGCTAGAAAAGCTGTGAAGCTTTTGTTCTTAACGCAAAAAGTTTTCTCAGAGAAAGAATTATCCATCTCTAGAG
AAGAACTTCAACGTATGATGGACGTTTGTTCGAGAGAACGCTTTGGAGCTCATCCTCCTAAAGATATTTCTAATGAAATG
CTCCAAGAGTTAGTCCTTGCTGCTCGCGATCGATTAACTTATCATAAAGCAATTGAAGCTATTTCAGCTGAGAAAAAAGA
TCTAGAGGTTGTCCCCTCTTAG

Upstream 100 bases:

>100_bases
CAACGTGAAGGTCGTGAGTTCAAGCCTCATCACCCGCTTCTCTTTCCCGGATAACTTACCAAAAGGGTATTCTGTGTCTT
CACGAGATTTTTCTAACGAT

Downstream 100 bases:

>100_bases
TTTTGATCGCAGGAAAACGCTTGACCCAAGAAACACTTAAACATAGAATTCATCATTTTAATGCGTAGGTGTATTTTTAA
TTAGATGGGATCCCTCCCTT

Product: trigger factor

Products: peptidylproline (w =0) [C]

Alternate protein names: TF [H]

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MFSINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYATQVEQELRRFLLRASFEALS
QMCDRKPLSPKAVRSSTVDSCNAADGGVVSFLYEAFPVIPSLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPV
TRPSQEGDFISLSLHVSKKGDLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLNGDLLTFT
VNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAEDALAQLIDFDLPQSLLQEREEILSREK
LLNARLVKYCSDSELEEQKQTLLEEAKADARKAVKLLFLTQKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISNEM
LQELVLAARDRLTYHKAIEAISAEKKDLEVVPS

Sequences:

>Translated_433_residues
MFSINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYATQVEQELRRFLLRASFEALS
QMCDRKPLSPKAVRSSTVDSCNAADGGVVSFLYEAFPVIPSLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPV
TRPSQEGDFISLSLHVSKKGDLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLNGDLLTFT
VNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAEDALAQLIDFDLPQSLLQEREEILSREK
LLNARLVKYCSDSELEEQKQTLLEEAKADARKAVKLLFLTQKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISNEM
LQELVLAARDRLTYHKAIEAISAEKKDLEVVPS
>Mature_433_residues
MFSINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYATQVEQELRRFLLRASFEALS
QMCDRKPLSPKAVRSSTVDSCNAADGGVVSFLYEAFPVIPSLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPV
TRPSQEGDFISLSLHVSKKGDLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLNGDLLTFT
VNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAEDALAQLIDFDLPQSLLQEREEILSREK
LLNARLVKYCSDSELEEQKQTLLEEAKADARKAVKLLFLTQKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISNEM
LQELVLAARDRLTYHKAIEAISAEKKDLEVVPS

Specific function: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation [H]

COG id: COG0544

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1070 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 500 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 340 Molecules/Cell In: Growth-Phase, Mini

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005215
- InterPro:   IPR008880
- InterPro:   IPR008881 [H]

Pfam domain/function: PF05698 Trigger_C; PF05697 Trigger_N [H]

EC number: NA

Molecular weight: Translated: 48963; Mature: 48963

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYA
CEEECCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
TQVEQELRRFLLRASFEALSQMCDRKPLSPKAVRSSTVDSCNAADGGVVSFLYEAFPVIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLHVSKKG
CCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCC
DLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLNGDLLTFT
CCCCCCEEEEECCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
VNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAEDALAQLI
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFDLPQSLLQEREEILSREKLLNARLVKYCSDSELEEQKQTLLEEAKADARKAVKLLFLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISNEMLQELVLAARDRLTYHKAIEA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAEKKDLEVVPS
HHCCCCCCCCCCC
>Mature Secondary Structure
MFSINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYA
CEEECCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
TQVEQELRRFLLRASFEALSQMCDRKPLSPKAVRSSTVDSCNAADGGVVSFLYEAFPVIP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLHVSKKG
CCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCC
DLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLNGDLLTFT
CCCCCCEEEEECCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
VNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAEDALAQLI
EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFDLPQSLLQEREEILSREKLLNARLVKYCSDSELEEQKQTLLEEAKADARKAVKLLFLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISNEMLQELVLAARDRLTYHKAIEA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAEKKDLEVVPS
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: peptidylproline (w =180) [C]

Specific reaction: peptidylproline (w =180) = peptidylproline (w =0) [C]

General reaction: Isomerases; cis-trans-Isomerases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA