| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120344
GI number: 16120344
Start: 358031
End: 358264
Strand: Direct
Name: Not Available
Synonym: VNG6479H
Alternate gene names: NA
Gene position: 358031-358264 (Clockwise)
Preceding gene: 16120342
Following gene: 16120345
Centisome position: 97.98
GC content: 58.55
Gene sequence:
>234_bases ATGGCCGAAAGCCGCAGTGAGAACCTTCGAACCTTTATGTGGTGGGCAGGCGAAACCTGCGATGGAATGTCTGACCTGAT CGTCAAAGCAGCCGTAAAGGACGAACTTTCGGAGCACAACGTCTCGGCCGATTTCTACGCCGCCCTCAACGAGGAAGTCG CTGAACTGCTCGATGACGCCGCCGACCGTGCCGAAGCGAACGAGCGGAAGACGGTCCAGCCTCGCGACCTGTAA
Upstream 100 bases:
>100_bases AGATGTCCCGCTGGAATCCAGTTAAATCGTGCATCCGTCTCTTTGCCTTCTACTGGGTTGAATAAGTCCCCTCTGATATC CTAGTGGGTCTTGCAGTCCT
Downstream 100 bases:
>100_bases CTCCGGATTTCGCGAGTTCACTCGTCACTCGAAGATTTCCTTTTGAAGGTTCTGTGTCGAATTAAGCAGACGTCCATGGC AGACATGCGTTTCAAACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAESRSENLRTFMWWAGETCDGMSDLIVKAAVKDELSEHNVSADFYAALNEEVAELLDDAADRAEANERKTVQPRDL
Sequences:
>Translated_77_residues MAESRSENLRTFMWWAGETCDGMSDLIVKAAVKDELSEHNVSADFYAALNEEVAELLDDAADRAEANERKTVQPRDL >Mature_76_residues AESRSENLRTFMWWAGETCDGMSDLIVKAAVKDELSEHNVSADFYAALNEEVAELLDDAADRAEANERKTVQPRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8648; Mature: 8516
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESRSENLRTFMWWAGETCDGMSDLIVKAAVKDELSEHNVSADFYAALNEEVAELLDDA CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ADRAEANERKTVQPRDL HHHHCCCCCCCCCCCCC >Mature Secondary Structure AESRSENLRTFMWWAGETCDGMSDLIVKAAVKDELSEHNVSADFYAALNEEVAELLDDA CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ADRAEANERKTVQPRDL HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA