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Identifier: 16120334

GI number: 16120334

Start: 349893

End: 350384

Strand: Reverse

Name: Not Available

Synonym: VNG6465H

Alternate gene names: NA

Gene position: 350384-349893 (Counterclockwise)

Preceding gene: 16120335

Following gene: 16120333

Centisome position: 95.88

GC content: 67.48

Gene sequence:

>492_bases
ATGGTAATCGATCCACTTCCACTACAGGTCGCCGCGGAGCTGTTCCCGAACGGCATTAGCCGCTACGCTATCGGCGGGCT
GCTGGTCGGCCTCGGTGTCACTGTCATCTACCTAGGCACCGGCATTAGCGCCGGCGCCAGCACGTTCCTGGAGTCGACGC
TGTCGTACGTCTCCGACCAGTCCCGCTTCCAGCAGTACGTCAGCTCCCGGGACTGGCGGCTCGTGTTCACGCTCGGCATC
GTCCTCGGCGCGGCCGTGTACGCCGTCGTCTACCAGGGCGGCGCGTGGACGACCGACGTCCAGCCGTGGCGACTGCTCGT
CGGCGGCGTCTTCGTCGGCATCGGCACGCGCGTCGGCAAGGGGTGTACGTCCGGCCACGGCGTCTGTGGCGTCGGCTCAG
CCTCGAAGACGTCCATCGTGGGCGTCCTCGCGTTCCTCACCGTCGCCATCGTGACCGCGCAAGTGGTCGCTGCACTGGGG
GTGAGCCCGTAA

Upstream 100 bases:

>100_bases
GCCAGAACGCCGTCGACGACGAGGAAGCGTTCACCCTGGAACTCGGCCCGAACAACTGCGCGGCCAGCCAGGACTCTCTC
GCAGGTGACTAACGACGCCG

Downstream 100 bases:

>100_bases
TGAGTGACCGGCATCCAGCGTTCATGCCGTTGATTCTCGTCGGCGGCCTCATCTTCGGGTTCGGGCTCGCGTATAGCCAG
ATGGCTCGGCCTGAGGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGVTVIYLGTGISAGASTFLESTLSYVSDQSRFQQYVSSRDWRLVFTLGI
VLGAAVYAVVYQGGAWTTDVQPWRLLVGGVFVGIGTRVGKGCTSGHGVCGVGSASKTSIVGVLAFLTVAIVTAQVVAALG
VSP

Sequences:

>Translated_163_residues
MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGVTVIYLGTGISAGASTFLESTLSYVSDQSRFQQYVSSRDWRLVFTLGI
VLGAAVYAVVYQGGAWTTDVQPWRLLVGGVFVGIGTRVGKGCTSGHGVCGVGSASKTSIVGVLAFLTVAIVTAQVVAALG
VSP
>Mature_163_residues
MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGVTVIYLGTGISAGASTFLESTLSYVSDQSRFQQYVSSRDWRLVFTLGI
VLGAAVYAVVYQGGAWTTDVQPWRLLVGGVFVGIGTRVGKGCTSGHGVCGVGSASKTSIVGVLAFLTVAIVTAQVVAALG
VSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16710; Mature: 16710

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00502 POLYGALACTURONASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGVTVIYLGTGISAGASTFLESTLSYVSDQ
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCH
SRFQQYVSSRDWRLVFTLGIVLGAAVYAVVYQGGAWTTDVQPWRLLVGGVFVGIGTRVGK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GCTSGHGVCGVGSASKTSIVGVLAFLTVAIVTAQVVAALGVSP
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGVTVIYLGTGISAGASTFLESTLSYVSDQ
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCH
SRFQQYVSSRDWRLVFTLGIVLGAAVYAVVYQGGAWTTDVQPWRLLVGGVFVGIGTRVGK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GCTSGHGVCGVGSASKTSIVGVLAFLTVAIVTAQVVAALGVSP
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA