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Identifier: 16120335

GI number: 16120335

Start: 350393

End: 351586

Strand: Reverse

Name: Not Available

Synonym: VNG6466C

Alternate gene names: 16120335

Gene position: 351586-350393 (Counterclockwise)

Preceding gene: 16120338

Following gene: 16120334

Centisome position: 96.21

GC content: 65.83

Gene sequence:

>1194_bases
ATGAACGCCGACGACTTCCCGACTCCAGACGCCGACGTGGAATCCGTCGACCCGGAATCGCTCAAAGATCGCATCGACGC
CGGCGAGGACGTCACGCTCCTCGACGCACGAATGACCAGCGACTACGAAGAGTGGCACATCGACGGTGAAAACGTCACGT
CGATCAACGTCCCGTACTTCGAGTTCCTCGAGGACGACATCGACGAGGACGTCCTTGACCAGATTCCCGACGACCGCGAG
GTGACCGTCCTCTGCGCGAAGGGCGGCGCCAGCGAGTTCGTCGCGGGCACGCTCGCGGAGCGTGACTACGACGTCGACCA
CCTCGAAGACGGAATGAACGGCTGGGCGCGCATCTACGACGCCGTCGAAGTCGAAGGCTACGACGGCGCCGGCACGCTGC
TGCAGTACCAGCGCCCCTCCTCGGGCTGTCTCGGCTACCTCCTCTACGACGATGGCGAAGCCGCAATCATCGATCCGTTG
CGTGCGTTCACCGACCGCTACCTTGACGACGCCGACAATCTCGGCGTCGACCTGCAGTACGCCCTAGATACCCACGTCCA
CGCCGACCACATCTCCGGTGTTCGCAATCTCGCTGAGGAGGACATCGAGGGCGTCATCCCCGAGGCCGCTGTCGACCGTG
GCATCACGTACGCCGACGACATGACGACCGCCGCAGACGGCGACACCTTCGACGTCGGCGACGCCACCATCGAAGCTGTC
TACACCCCCGGACACACGACCGGGATGACCTCCTACCTCGTCGACGACAGCCTGCTCGCGACCGGCGACGGGCTATTCAT
CGAGAGCGTCGCCCGCCCCGACCTCGAGGAGGGCGACGACGGCGCGCCCGACGCAGCGCGCATGCTCTACGAGTCGCTCC
AGGAGCGCGTCCTCACGCTACCCGATGACACGCTCGTCGGTGGCGCGCACTTCAGCGACGCCGCCGACCCCGCCGCCGAC
GGCACGTACACCGCACCCATCGGCGAACTCGTCGACGAGATGGACGCGCTCACGATGGACGAACAGGCGTTCGTCGACCT
GGTCCTCTCGGACATGCCGCCGCGGCCGGCCAACTACGAGGACATCATCGCGACGAACCTCGGCCAGAACGCCGTCGACG
ACGAGGAAGCGTTCACCCTGGAACTCGGCCCGAACAACTGCGCGGCCAGCCAGGACTCTCTCGCAGGTGACTAA

Upstream 100 bases:

>100_bases
GCGTGGTATTCAGAATATCGACATCCCACAGTATTGCTTAGAATGGGAATTACTATGCAAATGCTTTTGTGCGTCCACCC
AGTAGAATCGACTGCACAAT

Downstream 100 bases:

>100_bases
CGACGCCGATGGTAATCGATCCACTTCCACTACAGGTCGCCGCGGAGCTGTTCCCGAACGGCATTAGCCGCTACGCTATC
GGCGGGCTGCTGGTCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNADDFPTPDADVESVDPESLKDRIDAGEDVTLLDARMTSDYEEWHIDGENVTSINVPYFEFLEDDIDEDVLDQIPDDRE
VTVLCAKGGASEFVAGTLAERDYDVDHLEDGMNGWARIYDAVEVEGYDGAGTLLQYQRPSSGCLGYLLYDDGEAAIIDPL
RAFTDRYLDDADNLGVDLQYALDTHVHADHISGVRNLAEEDIEGVIPEAAVDRGITYADDMTTAADGDTFDVGDATIEAV
YTPGHTTGMTSYLVDDSLLATGDGLFIESVARPDLEEGDDGAPDAARMLYESLQERVLTLPDDTLVGGAHFSDAADPAAD
GTYTAPIGELVDEMDALTMDEQAFVDLVLSDMPPRPANYEDIIATNLGQNAVDDEEAFTLELGPNNCAASQDSLAGD

Sequences:

>Translated_397_residues
MNADDFPTPDADVESVDPESLKDRIDAGEDVTLLDARMTSDYEEWHIDGENVTSINVPYFEFLEDDIDEDVLDQIPDDRE
VTVLCAKGGASEFVAGTLAERDYDVDHLEDGMNGWARIYDAVEVEGYDGAGTLLQYQRPSSGCLGYLLYDDGEAAIIDPL
RAFTDRYLDDADNLGVDLQYALDTHVHADHISGVRNLAEEDIEGVIPEAAVDRGITYADDMTTAADGDTFDVGDATIEAV
YTPGHTTGMTSYLVDDSLLATGDGLFIESVARPDLEEGDDGAPDAARMLYESLQERVLTLPDDTLVGGAHFSDAADPAAD
GTYTAPIGELVDEMDALTMDEQAFVDLVLSDMPPRPANYEDIIATNLGQNAVDDEEAFTLELGPNNCAASQDSLAGD
>Mature_397_residues
MNADDFPTPDADVESVDPESLKDRIDAGEDVTLLDARMTSDYEEWHIDGENVTSINVPYFEFLEDDIDEDVLDQIPDDRE
VTVLCAKGGASEFVAGTLAERDYDVDHLEDGMNGWARIYDAVEVEGYDGAGTLLQYQRPSSGCLGYLLYDDGEAAIIDPL
RAFTDRYLDDADNLGVDLQYALDTHVHADHISGVRNLAEEDIEGVIPEAAVDRGITYADDMTTAADGDTFDVGDATIEAV
YTPGHTTGMTSYLVDDSLLATGDGLFIESVARPDLEEGDDGAPDAARMLYESLQERVLTLPDDTLVGGAHFSDAADPAAD
GTYTAPIGELVDEMDALTMDEQAFVDLVLSDMPPRPANYEDIIATNLGQNAVDDEEAFTLELGPNNCAASQDSLAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=190, Percent_Identity=35.2631578947368, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17538952, Length=237, Percent_Identity=29.535864978903, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221330176, Length=234, Percent_Identity=32.0512820512821, Blast_Score=99, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR001763 [H]

Pfam domain/function: PF00753 Lactamase_B; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 42854; Mature: 42854

Theoretical pI: Translated: 3.47; Mature: 3.47

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADDFPTPDADVESVDPESLKDRIDAGEDVTLLDARMTSDYEEWHIDGENVTSINVPYF
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHCCCHHHEECCCCCEEEECCCHH
EFLEDDIDEDVLDQIPDDREVTVLCAKGGASEFVAGTLAERDYDVDHLEDGMNGWARIYD
HHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVEVEGYDGAGTLLQYQRPSSGCLGYLLYDDGEAAIIDPLRAFTDRYLDDADNLGVDLQY
HEEECCCCCCCCEEEECCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCEEEE
ALDTHVHADHISGVRNLAEEDIEGVIPEAAVDRGITYADDMTTAADGDTFDVGDATIEAV
ECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCCCCCCCCCEEECCCCEEEEE
YTPGHTTGMTSYLVDDSLLATGDGLFIESVARPDLEEGDDGAPDAARMLYESLQERVLTL
ECCCCCCCCHHHHHCCCCEECCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECC
PDDTLVGGAHFSDAADPAADGTYTAPIGELVDEMDALTMDEQAFVDLVLSDMPPRPANYE
CCCCEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHH
DIIATNLGQNAVDDEEAFTLELGPNNCAASQDSLAGD
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNADDFPTPDADVESVDPESLKDRIDAGEDVTLLDARMTSDYEEWHIDGENVTSINVPYF
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEHHHCCCHHHEECCCCCEEEECCCHH
EFLEDDIDEDVLDQIPDDREVTVLCAKGGASEFVAGTLAERDYDVDHLEDGMNGWARIYD
HHHHHCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVEVEGYDGAGTLLQYQRPSSGCLGYLLYDDGEAAIIDPLRAFTDRYLDDADNLGVDLQY
HEEECCCCCCCCEEEECCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCEEEE
ALDTHVHADHISGVRNLAEEDIEGVIPEAAVDRGITYADDMTTAADGDTFDVGDATIEAV
ECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCCCCCCCCCEEECCCCEEEEE
YTPGHTTGMTSYLVDDSLLATGDGLFIESVARPDLEEGDDGAPDAARMLYESLQERVLTL
ECCCCCCCCHHHHHCCCCEECCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEECC
PDDTLVGGAHFSDAADPAADGTYTAPIGELVDEMDALTMDEQAFVDLVLSDMPPRPANYE
CCCCEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHH
DIIATNLGQNAVDDEEAFTLELGPNNCAASQDSLAGD
HHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]