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The map label for this gene is boa3_2

Identifier: 16120331

GI number: 16120331

Start: 347456

End: 348232

Strand: Direct

Name: boa3_2

Synonym: VNG6461G

Alternate gene names: NA

Gene position: 347456-348232 (Clockwise)

Preceding gene: 16120322

Following gene: 16120336

Centisome position: 95.08

GC content: 59.07

Gene sequence:

>777_bases
ATGACCGGCACCGCTAATTACGTCGAGTTCGAACCTACGCGTATGGGACTGTACGAGGCCTCCATTCGAGTGAAACACGA
ATGCCCGTACCGACGGATCTCGGAGCGATACCCGGATCTGACAATACGTGAGTGGCCGTTGAGCGACTGCCAAGTGCTCG
AAATCACGACGGAGACGACGCCAACCGACGAACTACTCGACGAAATCAACGAGATCGGCACCGTACTGTACGAATCGGCG
GACGACAACGGATATCACGTCGTCACCCAGTCCTGTCTTTGCTCGCTCGAAGACTCCGTCATCGACCGCTTCGAGGAGCA
CAACTGCCTGTACCAGTCACCGACGATCTACCGCCAGGGCTGGGAGCACTACACGGTCGTCGCGTTCGACAGCGAGGACG
TGCGCGAACTGCTCGACTCGCTTCGATCCGACAGAGAGATCGAACTCCTCTCGAAGACGTCAATCTCGGAGACACAGATT
CCGCATAGTATGCTGGCGCCGGCGAATCAGTTGTTCGAAGACATCACTGACCGGCAGCTAGCCGCACTCCAGCTTGCCCT
CGAAAGCGGGTACTACGAACAGCCACGGAAGACGTCGCTCCGCGACCTCGCCGAACGGACGGCCGTCGCTCGCTCGACGT
ACGAAGAACACCTCCGGAAGGCAGAGAATAAACTGCTCACGAACGCGGGCCAATTCCTCCGGCTGGTCACCGCGACCTCG
ACGACCAACCCTCTGGGTGTCGAGAGCGGTCGACGAACCGAACAGACCGCTGACTAA

Upstream 100 bases:

>100_bases
CCATCATCATCCTGTACCTGTTCGCCGAGTTCCGCTGGCGAGAGTTCCTGCATCGGTAGTCCGGATTAGCAGAGATATTA
GCATATGGGTACTGCCGGCC

Downstream 100 bases:

>100_bases
CGACGGTCGGCAAAGACTACAGCAGCAACGCACCAGCGGCATACGCGAGGGCGAACGAGAGGGCGAACGAGCCGATCCAC
GCACCAATCGTCACACCGAT

Product: bacterio-opsin activator-like protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator-Like Protein; Transcription Regulator-Like Protein

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTGTANYVEFEPTRMGLYEASIRVKHECPYRRISERYPDLTIREWPLSDCQVLEITTETTPTDELLDEINEIGTVLYESA
DDNGYHVVTQSCLCSLEDSVIDRFEEHNCLYQSPTIYRQGWEHYTVVAFDSEDVRELLDSLRSDREIELLSKTSISETQI
PHSMLAPANQLFEDITDRQLAALQLALESGYYEQPRKTSLRDLAERTAVARSTYEEHLRKAENKLLTNAGQFLRLVTATS
TTNPLGVESGRRTEQTAD

Sequences:

>Translated_258_residues
MTGTANYVEFEPTRMGLYEASIRVKHECPYRRISERYPDLTIREWPLSDCQVLEITTETTPTDELLDEINEIGTVLYESA
DDNGYHVVTQSCLCSLEDSVIDRFEEHNCLYQSPTIYRQGWEHYTVVAFDSEDVRELLDSLRSDREIELLSKTSISETQI
PHSMLAPANQLFEDITDRQLAALQLALESGYYEQPRKTSLRDLAERTAVARSTYEEHLRKAENKLLTNAGQFLRLVTATS
TTNPLGVESGRRTEQTAD
>Mature_257_residues
TGTANYVEFEPTRMGLYEASIRVKHECPYRRISERYPDLTIREWPLSDCQVLEITTETTPTDELLDEINEIGTVLYESAD
DNGYHVVTQSCLCSLEDSVIDRFEEHNCLYQSPTIYRQGWEHYTVVAFDSEDVRELLDSLRSDREIELLSKTSISETQIP
HSMLAPANQLFEDITDRQLAALQLALESGYYEQPRKTSLRDLAERTAVARSTYEEHLRKAENKLLTNAGQFLRLVTATST
TNPLGVESGRRTEQTAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29539; Mature: 29408

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTANYVEFEPTRMGLYEASIRVKHECPYRRISERYPDLTIREWPLSDCQVLEITTETT
CCCCCCEEEECCHHHCCEECCEEEECCCCHHHHHHHCCCCEEEECCCCCCEEEEEECCCC
PTDELLDEINEIGTVLYESADDNGYHVVTQSCLCSLEDSVIDRFEEHNCLYQSPTIYRQG
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCC
WEHYTVVAFDSEDVRELLDSLRSDREIELLSKTSISETQIPHSMLAPANQLFEDITDRQL
CCEEEEEEECCHHHHHHHHHHHCCCEEEHHHHCCCCHHHCCHHHHCCHHHHHHHHHHHHH
AALQLALESGYYEQPRKTSLRDLAERTAVARSTYEEHLRKAENKLLTNAGQFLRLVTATS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
TTNPLGVESGRRTEQTAD
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGTANYVEFEPTRMGLYEASIRVKHECPYRRISERYPDLTIREWPLSDCQVLEITTETT
CCCCCEEEECCHHHCCEECCEEEECCCCHHHHHHHCCCCEEEECCCCCCEEEEEECCCC
PTDELLDEINEIGTVLYESADDNGYHVVTQSCLCSLEDSVIDRFEEHNCLYQSPTIYRQG
CHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCC
WEHYTVVAFDSEDVRELLDSLRSDREIELLSKTSISETQIPHSMLAPANQLFEDITDRQL
CCEEEEEEECCHHHHHHHHHHHCCCEEEHHHHCCCCHHHCCHHHHCCHHHHHHHHHHHHH
AALQLALESGYYEQPRKTSLRDLAERTAVARSTYEEHLRKAENKLLTNAGQFLRLVTATS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
TTNPLGVESGRRTEQTAD
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA