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Identifier: 16120322

GI number: 16120322

Start: 340219

End: 341337

Strand: Direct

Name: Not Available

Synonym: VNG6450H

Alternate gene names: NA

Gene position: 340219-341337 (Clockwise)

Preceding gene: 16120321

Following gene: 16120331

Centisome position: 93.1

GC content: 63.09

Gene sequence:

>1119_bases
ATGTCTAATAACGACGCTACCCCTGGGGTTCGCGGCCTCGAAACCCTCCTCGACGACCGCATGGTCTCCCTCGAAAGCCC
ACAGACCCAGCAAATCACGAGGGTCGCCGTCAACAATCTGTTCCAGTTCCTCACCGAGAACAACGATGTCGACTCCGTCG
CGGACGTCGACGAACAGGACGCTCGAGATTGGGTTATCCACCTCGTGAAAGAAGACGATCTCGCCGCGAACTCCATCCGG
ACGTATTTCGCGCTCGCGCGCGCCACGTTTGGCTGGTGGCAACGCAGCGGTGAGATCGGCCAGAACCCGCTCGCGACGAC
CACCGCCGAAGAAGTACTCCCGTCGAAGAGCAACGACGTCGAGCAACAGTTCTGGACTGCCGATGCTCGCGAACGATTGC
TCAACTACGTCGACGAGCGCGCCCATGCTGCACTCGAGAACGACAGCAGCGACGCCGCACGCGCGTTCCGGGACCGCTCC
CTTGTCTACATCCTTGCGGATACCGGCGTCCGTGGCGCGGAGATCTGCAGCGTCAGCCGCGACAACCGCCGCAACGGCCT
CCGATGGACGGACGTTGACCTCGAGGCGGGCGTGATGACTGTCCTCGGGAAGTCCGGCGACCAGGAATCGGTATCGCTCC
CGGGGGTGACTTCCGAGAAGCTGGCGCGCTACCGGCGACTCGTCGACGCCCCCGCCGAATGGCCGGTTATCCCGACCGGA
GACGCAACCTCGAAATACCGGGCCGTTCGCAAGCAGCTACGCGAACGCGAGTACGGGGACGAGGCAATCGAGGGAGTCCT
GGAAGACTGCGAAATCGACGAGGTGCTGCGCGAGTATGAGGTTGCGCCGCCTGCGTTGACGACAGAGGGCGCGAGAACGC
TCTTGAAGCGGCTTTGCGGGGAGGCGGACGTCGATATCGACGGCGATTATTTGAAGCCCCACGGCGGCCGGCGTGGGCTC
GGAGACGAACTCTACGGCGAGGTCGCCGCCGAAAGCGCACAGGAGGTCCTTCGACACAAGTCCATCGAGACAACGCATGC
CTCCTATCGGGAGCGACGGGCTGAGGACCTGAGCGCGGATATCGAGAAGGTCCGGTATAGCAACACTGACGAAGAGTGA

Upstream 100 bases:

>100_bases
ACCACCCTCAGATTCGGCGCTGGCGGTGGCCGAGGCGTCCGCTACAAATCCTTCGTACTCCACGATGCGGAGTGTTTCAA
CGCGTGGAAGCGTGATTTAG

Downstream 100 bases:

>100_bases
GGCGCGAAACGCCGGCAGTGAGGAACTTTAGAGGCTAAAACAGACGTATGGGATCCTCGCTGACCGAGGCTCGAAAAGCC
TGAAACCTCGGACAGTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Site-Specific Recombinase; Site-Specific Recombinase XerD-Like Protein; Phage Integrase; Site-Specific Recombinase XerD

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSNNDATPGVRGLETLLDDRMVSLESPQTQQITRVAVNNLFQFLTENNDVDSVADVDEQDARDWVIHLVKEDDLAANSIR
TYFALARATFGWWQRSGEIGQNPLATTTAEEVLPSKSNDVEQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRS
LVYILADTGVRGAEICSVSRDNRRNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTSEKLARYRRLVDAPAEWPVIPTG
DATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLREYEVAPPALTTEGARTLLKRLCGEADVDIDGDYLKPHGGRRGL
GDELYGEVAAESAQEVLRHKSIETTHASYRERRAEDLSADIEKVRYSNTDEE

Sequences:

>Translated_372_residues
MSNNDATPGVRGLETLLDDRMVSLESPQTQQITRVAVNNLFQFLTENNDVDSVADVDEQDARDWVIHLVKEDDLAANSIR
TYFALARATFGWWQRSGEIGQNPLATTTAEEVLPSKSNDVEQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRS
LVYILADTGVRGAEICSVSRDNRRNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTSEKLARYRRLVDAPAEWPVIPTG
DATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLREYEVAPPALTTEGARTLLKRLCGEADVDIDGDYLKPHGGRRGL
GDELYGEVAAESAQEVLRHKSIETTHASYRERRAEDLSADIEKVRYSNTDEE
>Mature_371_residues
SNNDATPGVRGLETLLDDRMVSLESPQTQQITRVAVNNLFQFLTENNDVDSVADVDEQDARDWVIHLVKEDDLAANSIRT
YFALARATFGWWQRSGEIGQNPLATTTAEEVLPSKSNDVEQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRSL
VYILADTGVRGAEICSVSRDNRRNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTSEKLARYRRLVDAPAEWPVIPTGD
ATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLREYEVAPPALTTEGARTLLKRLCGEADVDIDGDYLKPHGGRRGLG
DELYGEVAAESAQEVLRHKSIETTHASYRERRAEDLSADIEKVRYSNTDEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41609; Mature: 41478

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNDATPGVRGLETLLDDRMVSLESPQTQQITRVAVNNLFQFLTENNDVDSVADVDEQD
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH
ARDWVIHLVKEDDLAANSIRTYFALARATFGWWQRSGEIGQNPLATTTAEEVLPSKSNDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCH
EQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRSLVYILADTGVRGAEICSVSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHCCCC
DNRRNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTSEKLARYRRLVDAPAEWPVIPTG
CCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCC
DATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLREYEVAPPALTTEGARTLLKRLCG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
EADVDIDGDYLKPHGGRRGLGDELYGEVAAESAQEVLRHKSIETTHASYRERRAEDLSAD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IEKVRYSNTDEE
HHHHHCCCCCCC
>Mature Secondary Structure 
SNNDATPGVRGLETLLDDRMVSLESPQTQQITRVAVNNLFQFLTENNDVDSVADVDEQD
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHH
ARDWVIHLVKEDDLAANSIRTYFALARATFGWWQRSGEIGQNPLATTTAEEVLPSKSNDV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCH
EQQFWTADARERLLNYVDERAHAALENDSSDAARAFRDRSLVYILADTGVRGAEICSVSR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHCCCC
DNRRNGLRWTDVDLEAGVMTVLGKSGDQESVSLPGVTSEKLARYRRLVDAPAEWPVIPTG
CCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCC
DATSKYRAVRKQLREREYGDEAIEGVLEDCEIDEVLREYEVAPPALTTEGARTLLKRLCG
CCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
EADVDIDGDYLKPHGGRRGLGDELYGEVAAESAQEVLRHKSIETTHASYRERRAEDLSAD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IEKVRYSNTDEE
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA