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The map label for this gene is orc4

Identifier: 16120260

GI number: 16120260

Start: 291390

End: 292622

Strand: Reverse

Name: orc4

Synonym: VNG6363G

Alternate gene names: 16120260

Gene position: 292622-291390 (Counterclockwise)

Preceding gene: 16120261

Following gene: 16120256

Centisome position: 80.08

GC content: 56.77

Gene sequence:

>1233_bases
ATGACGCCCGACTCTTCACCCAGTTCTGTCGACGATCCACTCTTTGAATCCGGGCATCGCATCTTCGCGAACAAGGATCT
CCTGAAAATCGGCCACGTGCCGGAGGCTGACCGGATCGTCGGTCGCGACGAGGAAATCTCGAAGCTCGCGAAACGTCTCA
ACGGTGCTGTCCACGGGTACTCCCCGGAAAACGTGATGATTTACGGGAAAACGGGGACCGGTAAATCCCTCGTTTCAAAA
CACGTCTGCCAGCGAGCTCAAAATGCCGCTCAGGATGGCGTCGAGATTGGAACAGCGTATATCGACTGTGCTGAAGACAA
TACCGAGACCCAAGCAATCTCCTCACTTGCCGCGAAGCTGAACGATGAATCTTCGACTGGAATCTCCGTCCCACACACCG
GCCTCAGTACGTCGAAATACTACAAACTCCTCTGGAAGACGCTCGACGCTCAATTCGATTCTGTGATCATCATCCTCGAC
GAGATCGATCTGATGAACGACGACAGCGTGCTGATGAAGCTCTCGCGCGCTGAGGAGGCGGGAAAAATCGACTGTAGCGT
CGGTGTCATCGCGATCAGCAACAAGATCCAGTACGTCGACAACGTGAACGAGCGCGTGAAAAGCAGCTTCCAGCACAAGG
AGCTGTTCTTCAAGCCATACGACGCCAACCAGCTCCGGGAGATCATGTTCAATCGTGAGGACGCCTTCCAGGACGGCGTC
CTTTCCGAGGACGTGATTCCGCTCTCGGCAGCCTTCGCCGCGCAGGAACACGGCGATGCTCGGAAGGCAATCGACATTCT
TCGCCACGCCGGGGAGGTCGCCTACGAGGCCGGGGCAGAGCTAGTGACGGAGGAACACGTCCGCCAGGCACAGCAACACG
CCGAAAAGGACCGGTTCAGAGAACTCGTGAACGGCGCACCCACGCAGGCGAAGGCGGCGTTGCTGGCGCTCACGGAACTG
AGTGTCAACAGCAACGACGATGCGTTCCTCACGAGCCGGGTGTACGACCAGTACGAACACATCTGTAATCATCTCGATAT
GGATATCCTCTCCGTCCGCCGGTTTCGCGACATCCTGAAAGAGCAAGCCTTCCTCGGGGTTGTCGAAATCGAGAAAATCA
ACAAGGGGAGTGCGGGTGGAATCCACCTCCAGAACCGACTTATCGAAGATTCCCAGGTCGTCCGCGAAACGATCCTTGAG
GACAGCCGGATGCAGGACTGGACTCGCGAGTAA

Upstream 100 bases:

>100_bases
ACGGCATTTTCCGGCTGATATCGGACAAGGAACGTCGGAAACGTGGGGTGGTGTTCTCCACTAGATTTATACTCCCTCCG
CTCACACCGTGTGATATTCA

Downstream 100 bases:

>100_bases
TGACCCCTACTATTGACTGGGTGCGGACGACGGAAATCTGGGGTGGGGCGTGAGGAAACGACGGAAACGAGGGGGTCGAA
AATTACGTCGGAAACGTGGG

Product: orc / cell division control protein 6

Products: NA

Alternate protein names: CDC6 homolog 6

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTPDSSPSSVDDPLFESGHRIFANKDLLKIGHVPEADRIVGRDEEISKLAKRLNGAVHGYSPENVMIYGKTGTGKSLVSK
HVCQRAQNAAQDGVEIGTAYIDCAEDNTETQAISSLAAKLNDESSTGISVPHTGLSTSKYYKLLWKTLDAQFDSVIIILD
EIDLMNDDSVLMKLSRAEEAGKIDCSVGVIAISNKIQYVDNVNERVKSSFQHKELFFKPYDANQLREIMFNREDAFQDGV
LSEDVIPLSAAFAAQEHGDARKAIDILRHAGEVAYEAGAELVTEEHVRQAQQHAEKDRFRELVNGAPTQAKAALLALTEL
SVNSNDDAFLTSRVYDQYEHICNHLDMDILSVRRFRDILKEQAFLGVVEIEKINKGSAGGIHLQNRLIEDSQVVRETILE
DSRMQDWTRE

Sequences:

>Translated_410_residues
MTPDSSPSSVDDPLFESGHRIFANKDLLKIGHVPEADRIVGRDEEISKLAKRLNGAVHGYSPENVMIYGKTGTGKSLVSK
HVCQRAQNAAQDGVEIGTAYIDCAEDNTETQAISSLAAKLNDESSTGISVPHTGLSTSKYYKLLWKTLDAQFDSVIIILD
EIDLMNDDSVLMKLSRAEEAGKIDCSVGVIAISNKIQYVDNVNERVKSSFQHKELFFKPYDANQLREIMFNREDAFQDGV
LSEDVIPLSAAFAAQEHGDARKAIDILRHAGEVAYEAGAELVTEEHVRQAQQHAEKDRFRELVNGAPTQAKAALLALTEL
SVNSNDDAFLTSRVYDQYEHICNHLDMDILSVRRFRDILKEQAFLGVVEIEKINKGSAGGIHLQNRLIEDSQVVRETILE
DSRMQDWTRE
>Mature_409_residues
TPDSSPSSVDDPLFESGHRIFANKDLLKIGHVPEADRIVGRDEEISKLAKRLNGAVHGYSPENVMIYGKTGTGKSLVSKH
VCQRAQNAAQDGVEIGTAYIDCAEDNTETQAISSLAAKLNDESSTGISVPHTGLSTSKYYKLLWKTLDAQFDSVIIILDE
IDLMNDDSVLMKLSRAEEAGKIDCSVGVIAISNKIQYVDNVNERVKSSFQHKELFFKPYDANQLREIMFNREDAFQDGVL
SEDVIPLSAAFAAQEHGDARKAIDILRHAGEVAYEAGAELVTEEHVRQAQQHAEKDRFRELVNGAPTQAKAALLALTELS
VNSNDDAFLTSRVYDQYEHICNHLDMDILSVRRFRDILKEQAFLGVVEIEKINKGSAGGIHLQNRLIEDSQVVRETILED
SRMQDWTRE

Specific function: Might be involved in the initiation of DNA replication

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDC6/cdc18 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CDC66_HALSA (Q9HHJ7)

Other databases:

- EMBL:   AE004438
- RefSeq:   NP_395848.1
- ProteinModelPortal:   Q9HHJ7
- SMR:   Q9HHJ7
- PRIDE:   Q9HHJ7
- GeneID:   1449358
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6363G
- NMPDR:   fig|64091.1.peg.2532
- HOGENOM:   HBG553472
- OMA:   NREDAFQ
- ProtClustDB:   CLSK391422
- BioCyc:   HSP64091:VNG6363G-MONOMER
- HAMAP:   MF_01407
- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR015163
- InterPro:   IPR014277
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PANTHER:   PTHR10763:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR02928

Pfam domain/function: PF00004 AAA; PF09079 Cdc6_C

EC number: NA

Molecular weight: Translated: 45634; Mature: 45502

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDSSPSSVDDPLFESGHRIFANKDLLKIGHVPEADRIVGRDEEISKLAKRLNGAVHGY
CCCCCCCCCCCCHHHHCCCEEEECCCCCEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCC
SPENVMIYGKTGTGKSLVSKHVCQRAQNAAQDGVEIGTAYIDCAEDNTETQAISSLAAKL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHC
NDESSTGISVPHTGLSTSKYYKLLWKTLDAQFDSVIIILDEIDLMNDDSVLMKLSRAEEA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCC
GKIDCSVGVIAISNKIQYVDNVNERVKSSFQHKELFFKPYDANQLREIMFNREDAFQDGV
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHHHHHCCC
LSEDVIPLSAAFAAQEHGDARKAIDILRHAGEVAYEAGAELVTEEHVRQAQQHAEKDRFR
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNGAPTQAKAALLALTELSVNSNDDAFLTSRVYDQYEHICNHLDMDILSVRRFRDILK
HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQAFLGVVEIEKINKGSAGGIHLQNRLIEDSQVVRETILEDSRMQDWTRE
HHHHHCCEEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPDSSPSSVDDPLFESGHRIFANKDLLKIGHVPEADRIVGRDEEISKLAKRLNGAVHGY
CCCCCCCCCCCHHHHCCCEEEECCCCCEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCC
SPENVMIYGKTGTGKSLVSKHVCQRAQNAAQDGVEIGTAYIDCAEDNTETQAISSLAAKL
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHC
NDESSTGISVPHTGLSTSKYYKLLWKTLDAQFDSVIIILDEIDLMNDDSVLMKLSRAEEA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCC
GKIDCSVGVIAISNKIQYVDNVNERVKSSFQHKELFFKPYDANQLREIMFNREDAFQDGV
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHHHHHCCC
LSEDVIPLSAAFAAQEHGDARKAIDILRHAGEVAYEAGAELVTEEHVRQAQQHAEKDRFR
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNGAPTQAKAALLALTELSVNSNDDAFLTSRVYDQYEHICNHLDMDILSVRRFRDILK
HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
EQAFLGVVEIEKINKGSAGGIHLQNRLIEDSQVVRETILEDSRMQDWTRE
HHHHHCCEEHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11016950