The gene/protein map for NC_002608 is currently unavailable.
Definition Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence.
Accession NC_002608
Length 365,425

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Identifier: 16120189

GI number: 16120189

Start: 206380

End: 208347

Strand: Direct

Name: Not Available

Synonym: VNG6268C

Alternate gene names: NA

Gene position: 206380-208347 (Clockwise)

Preceding gene: 16120184

Following gene: 16120190

Centisome position: 56.48

GC content: 65.14

Gene sequence:

>1968_bases
ATGCCACAAGACCCATCGGAGTCACCATCCACGGCGGACACGAATCGCACGACAAATGACCACACACGGCCTGGGCCGGC
TCCAACCGTTCCCGCCGGAAAGAACGTCGCCGAGCTCACCGTCAAGGCGGTGTTGATCGGGCTCGCGCTCAACGTGTTGC
TGCTCACTGCGAACATGTACCTCGGGATGCGGTCGGGGCTCACGATCAGCGCCTCGATCCCGGCGGCAGTCATCAGCATG
GGACTGTTCTACGCGCTGCGGTACGCGGGCATCGGCGGCACGATCCTGGAGAACAACATCGTACAGACGATGACTTCGGC
GGGCGAGGCACTGGCCGCCGGTGTGATCTTCACGATCGCGGGCGTCACGTTCCTCGATCAGTCCATCAACATCGTCGAAA
CCGCGGCCGTGGCTGCGTTGGGTGGGCTGCTCGGCGTGCTGTTCATGATCCCGATGCGGCGGTATCTCATCGTCGACAAG
CACGAACAGCTGCCCTACCCCGAGGGCACGGCGTGTGCGGACGTGCTCGAAACCGGCTCGGAAGGCGACGGCGGGGTGAA
ACTCATCTCACTGGGATTCTTCGTGAGCTTCATCTACATGTGGTTGGCCAACGGCATGGCCGTGATGAAGACGACCCTCG
AAACGGCGTTCTCGGCGGGTCAGACCCGCGGGTTCGCGATCGGCGGTGACTTCACGCCCGCCCTGATCGGCGTCGGCTAC
ATCATCGGTCCGCGGATCGCAGCGTACGTGTTCGGTGGCGGGCTGGTGGCGTGGATGATGTTGATCCCGCTGCTCATCAC
GGGCGGGTTTGTGCCCGATCAGGCGGCGAATCTCACCCTGATGGGACAAGCACACGCGGTCTGGGATCAGTACGTGCGAT
ACATCGGTGCGGGCGCGATGATCGTGGGCGGGTTCTACGCGATCATCTCGATGGCTGGAACGATCCGCGACGCGCTTGCG
TCCGCGGCCGCCGAACTCAGCGGCTCCAAATCGGAAACCGCGACACAGATCCCCCGAACCCAGCGCGACCTCTCGATGAA
AGTGGTCGTGCTCGGGGCGCTCGCGATCACGATCGCGCTGGTTGCGATCCCACAGGTCGAACTCGGCGTTCTGGGCGGTG
TCATTGCCGTGGTCGCCGCGTTCCTGTTCGTTGCGGTGTCCGCGTACCTGGTCGGGGTCGTCGGCAGCTCGTCGAACCCA
GTCTCCGGGATGGCGGTCGCGACCGTCCTGATCGCCGCACTCGCGATGAAATCCACCGGCGTCTCGGATCCGGTCGTGGT
GCTCTTGACCGCCTCCGTTGTTGCGATCGCCGCGGCGGTCGCCGGCGACACCTCACAGGACCTGAAAACCGGCTACCTGC
TCGGCGCAACCCCACGCAAACAGCAGATCGCACAGATGGTCGGGATCGCGATCTCGTCGGTGTTCGCGGGCTGGGTGCTG
TCGTTTTTCAACCAAGCGTACGGCATCGGAAGCGAGACGATCCCCGCTCCGCAGGCCGGCATGATGGCGCTGATCTCGGA
GGGAGTGCTCACTGGAAGCGCGCAGTGGGGGATGATCCTCATCGGTGCCGTCTTCGCGATCGTGTTGATCATGATGGACG
TCCCCGTGTTGCCGTTCTCGGTCGGCATCTACCTCCCGATCACGCTCGCCACGCCGATCTTCCTCGGCGGGCTGCTGCGG
GCGGGCGTCGACCGATACGTTGACTGGCGCAGCGACGACGGCGACGGGGCGGCAAAGGAACGTGCGACCTACCGCGGCCG
AATCATTGCCGCCGGGCTGATCACTGGCGAGGCGATCATGGGGATCGTCGTCGGCGGGATCTACGTGCTCGGGATCGGCG
CCGACGAGGGCGCGCCGTACGCGGTGGGACTCGCATCCGGCACACAGACGCTGCTCGGTGGCGTGGCGCTCGTCGCTCTC
GTCGCCGTCTTCGTCGGCGGCGTCATCCGCGACCCACAGGACACATGA

Upstream 100 bases:

>100_bases
CGACGATTTAGCATACATACGAAATCCGGTAGTTCGGTTGGTGTGGTCGGTGGGCTGCGCGACGACGGCGCAGGTGTGGA
GACGACCGCCCGATTCGATT

Downstream 100 bases:

>100_bases
CAACACACGCGCCAACTGCGATTCCGGAGCGCACAACAGAGGAGTGGACGGTCACGCAGACCGACGACGTGGTGCAGGTC
ACGATCACGCGAACGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 654

Protein sequence:

>655_residues
MPQDPSESPSTADTNRTTNDHTRPGPAPTVPAGKNVAELTVKAVLIGLALNVLLLTANMYLGMRSGLTISASIPAAVISM
GLFYALRYAGIGGTILENNIVQTMTSAGEALAAGVIFTIAGVTFLDQSINIVETAAVAALGGLLGVLFMIPMRRYLIVDK
HEQLPYPEGTACADVLETGSEGDGGVKLISLGFFVSFIYMWLANGMAVMKTTLETAFSAGQTRGFAIGGDFTPALIGVGY
IIGPRIAAYVFGGGLVAWMMLIPLLITGGFVPDQAANLTLMGQAHAVWDQYVRYIGAGAMIVGGFYAIISMAGTIRDALA
SAAAELSGSKSETATQIPRTQRDLSMKVVVLGALAITIALVAIPQVELGVLGGVIAVVAAFLFVAVSAYLVGVVGSSSNP
VSGMAVATVLIAALAMKSTGVSDPVVVLLTASVVAIAAAVAGDTSQDLKTGYLLGATPRKQQIAQMVGIAISSVFAGWVL
SFFNQAYGIGSETIPAPQAGMMALISEGVLTGSAQWGMILIGAVFAIVLIMMDVPVLPFSVGIYLPITLATPIFLGGLLR
AGVDRYVDWRSDDGDGAAKERATYRGRIIAAGLITGEAIMGIVVGGIYVLGIGADEGAPYAVGLASGTQTLLGGVALVAL
VAVFVGGVIRDPQDT

Sequences:

>Translated_655_residues
MPQDPSESPSTADTNRTTNDHTRPGPAPTVPAGKNVAELTVKAVLIGLALNVLLLTANMYLGMRSGLTISASIPAAVISM
GLFYALRYAGIGGTILENNIVQTMTSAGEALAAGVIFTIAGVTFLDQSINIVETAAVAALGGLLGVLFMIPMRRYLIVDK
HEQLPYPEGTACADVLETGSEGDGGVKLISLGFFVSFIYMWLANGMAVMKTTLETAFSAGQTRGFAIGGDFTPALIGVGY
IIGPRIAAYVFGGGLVAWMMLIPLLITGGFVPDQAANLTLMGQAHAVWDQYVRYIGAGAMIVGGFYAIISMAGTIRDALA
SAAAELSGSKSETATQIPRTQRDLSMKVVVLGALAITIALVAIPQVELGVLGGVIAVVAAFLFVAVSAYLVGVVGSSSNP
VSGMAVATVLIAALAMKSTGVSDPVVVLLTASVVAIAAAVAGDTSQDLKTGYLLGATPRKQQIAQMVGIAISSVFAGWVL
SFFNQAYGIGSETIPAPQAGMMALISEGVLTGSAQWGMILIGAVFAIVLIMMDVPVLPFSVGIYLPITLATPIFLGGLLR
AGVDRYVDWRSDDGDGAAKERATYRGRIIAAGLITGEAIMGIVVGGIYVLGIGADEGAPYAVGLASGTQTLLGGVALVAL
VAVFVGGVIRDPQDT
>Mature_654_residues
PQDPSESPSTADTNRTTNDHTRPGPAPTVPAGKNVAELTVKAVLIGLALNVLLLTANMYLGMRSGLTISASIPAAVISMG
LFYALRYAGIGGTILENNIVQTMTSAGEALAAGVIFTIAGVTFLDQSINIVETAAVAALGGLLGVLFMIPMRRYLIVDKH
EQLPYPEGTACADVLETGSEGDGGVKLISLGFFVSFIYMWLANGMAVMKTTLETAFSAGQTRGFAIGGDFTPALIGVGYI
IGPRIAAYVFGGGLVAWMMLIPLLITGGFVPDQAANLTLMGQAHAVWDQYVRYIGAGAMIVGGFYAIISMAGTIRDALAS
AAAELSGSKSETATQIPRTQRDLSMKVVVLGALAITIALVAIPQVELGVLGGVIAVVAAFLFVAVSAYLVGVVGSSSNPV
SGMAVATVLIAALAMKSTGVSDPVVVLLTASVVAIAAAVAGDTSQDLKTGYLLGATPRKQQIAQMVGIAISSVFAGWVLS
FFNQAYGIGSETIPAPQAGMMALISEGVLTGSAQWGMILIGAVFAIVLIMMDVPVLPFSVGIYLPITLATPIFLGGLLRA
GVDRYVDWRSDDGDGAAKERATYRGRIIAAGLITGEAIMGIVVGGIYVLGIGADEGAPYAVGLASGTQTLLGGVALVALV
AVFVGGVIRDPQDT

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321324, Length=503, Percent_Identity=23.2604373757455, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 67073; Mature: 66942

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQDPSESPSTADTNRTTNDHTRPGPAPTVPAGKNVAELTVKAVLIGLALNVLLLTANMY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGMRSGLTISASIPAAVISMGLFYALRYAGIGGTILENNIVQTMTSAGEALAAGVIFTIA
HHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTFLDQSINIVETAAVAALGGLLGVLFMIPMRRYLIVDKHEQLPYPEGTACADVLETGS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCC
EGDGGVKLISLGFFVSFIYMWLANGMAVMKTTLETAFSAGQTRGFAIGGDFTPALIGVGY
CCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHH
IIGPRIAAYVFGGGLVAWMMLIPLLITGGFVPDQAANLTLMGQAHAVWDQYVRYIGAGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHH
IVGGFYAIISMAGTIRDALASAAAELSGSKSETATQIPRTQRDLSMKVVVLGALAITIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VAIPQVELGVLGGVIAVVAAFLFVAVSAYLVGVVGSSSNPVSGMAVATVLIAALAMKSTG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
VSDPVVVLLTASVVAIAAAVAGDTSQDLKTGYLLGATPRKQQIAQMVGIAISSVFAGWVL
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SFFNQAYGIGSETIPAPQAGMMALISEGVLTGSAQWGMILIGAVFAIVLIMMDVPVLPFS
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VGIYLPITLATPIFLGGLLRAGVDRYVDWRSDDGDGAAKERATYRGRIIAAGLITGEAIM
CHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHH
GIVVGGIYVLGIGADEGAPYAVGLASGTQTLLGGVALVALVAVFVGGVIRDPQDT
HHHHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PQDPSESPSTADTNRTTNDHTRPGPAPTVPAGKNVAELTVKAVLIGLALNVLLLTANMY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGMRSGLTISASIPAAVISMGLFYALRYAGIGGTILENNIVQTMTSAGEALAAGVIFTIA
HHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVTFLDQSINIVETAAVAALGGLLGVLFMIPMRRYLIVDKHEQLPYPEGTACADVLETGS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCC
EGDGGVKLISLGFFVSFIYMWLANGMAVMKTTLETAFSAGQTRGFAIGGDFTPALIGVGY
CCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHH
IIGPRIAAYVFGGGLVAWMMLIPLLITGGFVPDQAANLTLMGQAHAVWDQYVRYIGAGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHH
IVGGFYAIISMAGTIRDALASAAAELSGSKSETATQIPRTQRDLSMKVVVLGALAITIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VAIPQVELGVLGGVIAVVAAFLFVAVSAYLVGVVGSSSNPVSGMAVATVLIAALAMKSTG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
VSDPVVVLLTASVVAIAAAVAGDTSQDLKTGYLLGATPRKQQIAQMVGIAISSVFAGWVL
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
SFFNQAYGIGSETIPAPQAGMMALISEGVLTGSAQWGMILIGAVFAIVLIMMDVPVLPFS
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VGIYLPITLATPIFLGGLLRAGVDRYVDWRSDDGDGAAKERATYRGRIIAAGLITGEAIM
CHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEEEHHHHHHHH
GIVVGGIYVLGIGADEGAPYAVGLASGTQTLLGGVALVALVAVFVGGVIRDPQDT
HHHHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]