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The map label for this gene is gvpF2

Identifier: 16120169

GI number: 16120169

Start: 188883

End: 189536

Strand: Reverse

Name: gvpF2

Synonym: VNG6237G

Alternate gene names: 16120169

Gene position: 189536-188883 (Counterclockwise)

Preceding gene: 16120170

Following gene: 16120168

Centisome position: 51.87

GC content: 65.44

Gene sequence:

>654_bases
ATGAGTGAGTCACACCTCTACACGTACGGCATCATCGACGACAACGAATCGCTCGCCCTGAACGTCGACGGCGTCGCCGG
CGCGACCCGCGCGTACACCGTCTCGTACAGATCGCTGTCGGCGGTCGTCTCCGACATCGAGACGACCGACCCCGAGCGAA
CCGACGCGGCCGTTGAAGCGCACAACACCGTCCTGCAGGCGGTGCTCGAACACGACGCCACGCGCGCTGTCGTCCCAATG
AGCTTCGGAATGGCGTTCAAGAACGCGCGCACACTGAAAGGCGTGCTCCGGGGGGCACGCCGGGCACTCCGGAGCACGCT
CACCGAGATCGCCGGCACAGTCGAGCTCGGCGTGAAGGTGCTTGCGCCCGGTGACGACACCGCCGTCGACACGGCCGCGG
TTCGGTCAGACGTCACCGCCCGGCTGAGTGCGTTGAGCGTCGGGGAAACGGAAAACGACTGCTTCACGGACCGACTGATC
ATCAACAAGTCGTATCTGGTCGAGCACGACACCAGGGACGCCTTCGACGCCGCCATCGACGAGATCGACGCCGCCCACGA
CGACCTCACGGTTCGGTACACGGGCCCGTGGCCCCCGTACAACTTCGTGGACATCCATATCGGCGCTGAGCAGGCCCAAC
AGGGGGGTAGATAG

Upstream 100 bases:

>100_bases
GTCGACAGCGTCGTCCTGCAGTTGCTCACGTTCGCTGTCGGATTACAGACCATCATGGCAGACTGCATCGTGAACCAATC
AGCGGACCCACAGCCCCAGG

Downstream 100 bases:

>100_bases
CCGTGTTCGTCCTCGATGACCTGTTCGTGAACCCGTTCCTCTCGCTGGTGGATATCCTCCAGACGATGGCCCTCGACGAA
CTGTACGACACCAGCGAGAT

Product: GvpF protein, cluster B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSESHLYTYGIIDDNESLALNVDGVAGATRAYTVSYRSLSAVVSDIETTDPERTDAAVEAHNTVLQAVLEHDATRAVVPM
SFGMAFKNARTLKGVLRGARRALRSTLTEIAGTVELGVKVLAPGDDTAVDTAAVRSDVTARLSALSVGETENDCFTDRLI
INKSYLVEHDTRDAFDAAIDEIDAAHDDLTVRYTGPWPPYNFVDIHIGAEQAQQGGR

Sequences:

>Translated_217_residues
MSESHLYTYGIIDDNESLALNVDGVAGATRAYTVSYRSLSAVVSDIETTDPERTDAAVEAHNTVLQAVLEHDATRAVVPM
SFGMAFKNARTLKGVLRGARRALRSTLTEIAGTVELGVKVLAPGDDTAVDTAAVRSDVTARLSALSVGETENDCFTDRLI
INKSYLVEHDTRDAFDAAIDEIDAAHDDLTVRYTGPWPPYNFVDIHIGAEQAQQGGR
>Mature_216_residues
SESHLYTYGIIDDNESLALNVDGVAGATRAYTVSYRSLSAVVSDIETTDPERTDAAVEAHNTVLQAVLEHDATRAVVPMS
FGMAFKNARTLKGVLRGARRALRSTLTEIAGTVELGVKVLAPGDDTAVDTAAVRSDVTARLSALSVGETENDCFTDRLII
NKSYLVEHDTRDAFDAAIDEIDAAHDDLTVRYTGPWPPYNFVDIHIGAEQAQQGGR

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPF2_HALSA (P33959)

Other databases:

- EMBL:   X64730
- EMBL:   X94688
- EMBL:   AE004438
- RefSeq:   NP_395757.1
- GeneID:   1449140
- GenomeReviews:   AE004438_GR
- KEGG:   hal:VNG6237G
- NMPDR:   fig|64091.1.peg.2441
- HOGENOM:   HBG098546
- OMA:   RRANMIA
- ProtClustDB:   CLSK539583
- BioCyc:   HSP64091:VNG6237G-MONOMER
- GO:   GO:0005773
- InterPro:   IPR009430

Pfam domain/function: PF06386 GvpL_GvpF

EC number: NA

Molecular weight: Translated: 23398; Mature: 23267

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESHLYTYGIIDDNESLALNVDGVAGATRAYTVSYRSLSAVVSDIETTDPERTDAAVEA
CCCCEEEEEEEEECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHH
HNTVLQAVLEHDATRAVVPMSFGMAFKNARTLKGVLRGARRALRSTLTEIAGTVELGVKV
HHHHHHHHHHCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LAPGDDTAVDTAAVRSDVTARLSALSVGETENDCFTDRLIINKSYLVEHDTRDAFDAAID
ECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHEEEECCCCEEECCCHHHHHHHHH
EIDAAHDDLTVRYTGPWPPYNFVDIHIGAEQAQQGGR
HHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHCCCC
>Mature Secondary Structure 
SESHLYTYGIIDDNESLALNVDGVAGATRAYTVSYRSLSAVVSDIETTDPERTDAAVEA
CCCEEEEEEEEECCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHH
HNTVLQAVLEHDATRAVVPMSFGMAFKNARTLKGVLRGARRALRSTLTEIAGTVELGVKV
HHHHHHHHHHCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LAPGDDTAVDTAAVRSDVTARLSALSVGETENDCFTDRLIINKSYLVEHDTRDAFDAAID
ECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHEEEECCCCEEECCCHHHHHHHHH
EIDAAHDDLTVRYTGPWPPYNFVDIHIGAEQAQQGGR
HHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1404376; 8763925; 11016950