| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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The map label for this gene is gvpG2
Identifier: 16120168
GI number: 16120168
Start: 188629
End: 188817
Strand: Reverse
Name: gvpG2
Synonym: VNG6236G
Alternate gene names: 16120168
Gene position: 188817-188629 (Counterclockwise)
Preceding gene: 16120169
Following gene: 16120167
Centisome position: 51.67
GC content: 61.9
Gene sequence:
>189_bases ATGGCCCTCGACGAACTGTACGACACCAGCGAGATCCGCGACCAGATCAAGGAAAACCAGCTGCTGTACGAGATCGGCGA CCGGCCCGCGGACGAGTACGAGCGCCGCAAACAGGAGCTGGAAGCCCAACTGCGGACGGCCGAACAGATCCGCGACCAGA TGCGCGACCGCATGGAGATCAAGAACTGA
Upstream 100 bases:
>100_bases TCGGCGCTGAGCAGGCCCAACAGGGGGGTAGATAGCCGTGTTCGTCCTCGATGACCTGTTCGTGAACCCGTTCCTCTCGC TGGTGGATATCCTCCAGACG
Downstream 100 bases:
>100_bases TGCCCACCGACGATCCGTCCGACCGGCCGAGCGGGCTCCTCGACCAGCTCAGTCGCCTCATCGAGACGCTCGCAGAACTC GACGACGACAACGGCGAACA
Product: GvpG protein, cluster B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MALDELYDTSEIRDQIKENQLLYEIGDRPADEYERRKQELEAQLRTAEQIRDQMRDRMEIKN
Sequences:
>Translated_62_residues MALDELYDTSEIRDQIKENQLLYEIGDRPADEYERRKQELEAQLRTAEQIRDQMRDRMEIKN >Mature_61_residues ALDELYDTSEIRDQIKENQLLYEIGDRPADEYERRKQELEAQLRTAEQIRDQMRDRMEIKN
Specific function: May play a structural or regulatory role in gas vesicle synthesis
COG id: NA
COG function: NA
Gene ontology:
Cell location: Vacuole, gas vesicle (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GVPG2_HALSA (P33960)
Other databases:
- EMBL: X64730 - EMBL: X94688 - EMBL: AE004438 - RefSeq: NP_395756.1 - GeneID: 1449139 - GenomeReviews: AE004438_GR - KEGG: hal:VNG6236G - HOGENOM: HBG498602 - BioCyc: HSP64091:VNG6236G-MONOMER - GO: GO:0005773
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7602; Mature: 7470
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDELYDTSEIRDQIKENQLLYEIGDRPADEYERRKQELEAQLRTAEQIRDQMRDRMEI CCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KN CC >Mature Secondary Structure ALDELYDTSEIRDQIKENQLLYEIGDRPADEYERRKQELEAQLRTAEQIRDQMRDRMEI CHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1404376; 8763925; 11016950