Click here to switch to the map view.

The map label for this gene is hsp5

Identifier: 16120142

GI number: 16120142

Start: 166469

End: 166840

Strand: Reverse

Name: hsp5

Synonym: VNG6201G

Alternate gene names: NA

Gene position: 166840-166469 (Counterclockwise)

Preceding gene: 16120143

Following gene: 16120141

Centisome position: 45.66

GC content: 61.02

Gene sequence:

>372_bases
ATGCCCCTTCCGACAGGTTCAACCAGTTCGTGGCTACAGAACTCCGGATTCCCGAGCCGACTGTTCGAAACCGGTCGCAA
CGACTACGAACTGTACGAGGAGGACGACGAGTTCGTCCTGAGCGTCGAGATGCCGGGCTTCGATCCCGAGGAGATCACCG
TTTCCTGGGACGAGGGTGTCCTCAACATCGCCGCCGAACACGAGGATGAGACGCGGAGCCAGCGCAAGACCTACCACCGT
CGCTTCCGCTTCCCAAAGAACGTCGAGGACGACGATATCGAGGCCCAGTACAATAACGGGATCCTCGAAGTCCGGCTGCC
GGTACTGACGGGTGCCACCACCCGCGGCAAGCAGATCGAGGTCCAGGCCTGA

Upstream 100 bases:

>100_bases
CACGCCACACCAATGTAATAATACATACATATTTGTGTTTTGATAGAAAATTTTTTACGAAATGCGGACATAGTTTTGGC
TGGAGTCAAGGTGATTAGCC

Downstream 100 bases:

>100_bases
CATCGCCTCGGACAGGAGTACTGACCGACAGCCGCTTTCTTCCGTGAGTAATCGAGGTGAGAGCCATGCGACTTACGGTC
AAACAACTCAAGAACCGCGA

Product: heat shock protease protein

Products: NA

Alternate protein names: Heat Shock Protein Hsp; Hsp20-Type Chaperone; Heat Shock Protease Protein; Hsp20-Type Molecular Chaperone; Molecular Chaperone

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPLPTGSTSSWLQNSGFPSRLFETGRNDYELYEEDDEFVLSVEMPGFDPEEITVSWDEGVLNIAAEHEDETRSQRKTYHR
RFRFPKNVEDDDIEAQYNNGILEVRLPVLTGATTRGKQIEVQA

Sequences:

>Translated_123_residues
MPLPTGSTSSWLQNSGFPSRLFETGRNDYELYEEDDEFVLSVEMPGFDPEEITVSWDEGVLNIAAEHEDETRSQRKTYHR
RFRFPKNVEDDDIEAQYNNGILEVRLPVLTGATTRGKQIEVQA
>Mature_122_residues
PLPTGSTSSWLQNSGFPSRLFETGRNDYELYEEDDEFVLSVEMPGFDPEEITVSWDEGVLNIAAEHEDETRSQRKTYHRR
FRFPKNVEDDDIEAQYNNGILEVRLPVLTGATTRGKQIEVQA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14156; Mature: 14024

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPTGSTSSWLQNSGFPSRLFETGRNDYELYEEDDEFVLSVEMPGFDPEEITVSWDEGV
CCCCCCCCCHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCE
LNIAAEHEDETRSQRKTYHRRFRFPKNVEDDDIEAQYNNGILEVRLPVLTGATTRGKQIE
EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCEEE
VQA
EEC
>Mature Secondary Structure 
PLPTGSTSSWLQNSGFPSRLFETGRNDYELYEEDDEFVLSVEMPGFDPEEITVSWDEGV
CCCCCCCCHHHHCCCCCHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCCE
LNIAAEHEDETRSQRKTYHRRFRFPKNVEDDDIEAQYNNGILEVRLPVLTGATTRGKQIE
EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCEEE
VQA
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA