| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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The map label for this gene is sojC2
Identifier: 16120102
GI number: 16120102
Start: 130856
End: 131923
Strand: Direct
Name: sojC2
Synonym: VNG6153G
Alternate gene names: 16120102
Gene position: 130856-131923 (Clockwise)
Preceding gene: 16120101
Following gene: 16120103
Centisome position: 35.81
GC content: 59.46
Gene sequence:
>1068_bases ATGGCTACTGTCCTCTATCAGACTCTAAAAAACCAATCTACTACGTCTACTTCGTCTACTGTGTCTACTGTATCTGTTCT GTCTACTGTGGCTTTCCTGTCTGTTGTGTCTACTTTGGAAAAGCTAAAGGAGTTGTCTACTGTCGTCTCGGGTGAGGCAA CCGATATGGCACAAAGCAACACCAGCAAAACCCCGCGTGCGGTCTGTGTGGGCATCCTGAAAGGCGGATTCGGGAAAACG ACCACCGCGCTCAACCTCGCTCGCGAGCTCGCGCACCGCAACGAAAAAGCACTGCTTGTCGACCTCGACGACAACGGCCA CCTCACTCTCAACCTCGGCCATCGCGACGCTTACCAGAACGGCTCCGGGGGCGACAACGAGAACCACGCCGAAGCAGTCC TTGTCAACGAGGCCGACCCACGCGACTACATCGTCAACGTCGCTGGCGGCCTCGACCTGTTCCCGTCCCACGCGGACTTA GAAGGCGTCGAATCCACGCTCAAAGACGCTGTGCAAGGCTCTGCTCGCCTCAAACAGCATCTTGTCGAACCGCTCCTTGG TGAGGACTACGACTACGTCGTTATCGACTGCCCCGCGAACCGCGGGAAGCTCAACGACAACGCGATGTTCGCGACCGGGA ACCTCATCATCCCGCTGCGGCCGGAACTCGGCTACGAAACCGGCCTCGACAACACAGTCAACCGGCTCGTGAAACCCGCA CGCCGGTACTTCGACCTCGACATTCTCGCCGTCGTTCCGTCCGACCTCCAGCGGCGTATCGACCAAGCAACGCTCGACCA AGAACTCCTCAAGGAGATTACCACGCGGGACGGTGTGGCGTCGAAGGTCCCGAACTTCGCGTACATCTCCCCGGAGGACT GGGAAGCCACCGAGGCCGGCGAGTATGACGACGGCCTGCCGGGCATCCGGCACCGGGACGCCATCAACAACTCGCTGCGG GACGCGAACGAGCCGCTGCGGGACTTCGACCGCGAATGCGACCAACTGGCAGCGTATGATGAGCTCGCGCAGATCGTCGA ACAAGGTGAGGTGATTCGTGATGAGTGA
Upstream 100 bases:
>100_bases CCTCTCCCCCTCGCTTCTCCTATATCTTCCGTCTACTGTGCCTCCCCCACCTTTCCTAAAGTAGTTATCTGTTGTATCTA TCTCATCTGCTGTACAGTAG
Downstream 100 bases:
>100_bases TGGCAACCCCTTCGACGACCTCAACGAGTCCATCGAGGACCAGGACTCCGAGGAGACTGAGGATAGTGAGGCGACCACGA CCGCGTCGACGTCGACGGCG
Product: Spo0A activation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MATVLYQTLKNQSTTSTSSTVSTVSVLSTVAFLSVVSTLEKLKELSTVVSGEATDMAQSNTSKTPRAVCVGILKGGFGKT TTALNLARELAHRNEKALLVDLDDNGHLTLNLGHRDAYQNGSGGDNENHAEAVLVNEADPRDYIVNVAGGLDLFPSHADL EGVESTLKDAVQGSARLKQHLVEPLLGEDYDYVVIDCPANRGKLNDNAMFATGNLIIPLRPELGYETGLDNTVNRLVKPA RRYFDLDILAVVPSDLQRRIDQATLDQELLKEITTRDGVASKVPNFAYISPEDWEATEAGEYDDGLPGIRHRDAINNSLR DANEPLRDFDRECDQLAAYDELAQIVEQGEVIRDE
Sequences:
>Translated_355_residues MATVLYQTLKNQSTTSTSSTVSTVSVLSTVAFLSVVSTLEKLKELSTVVSGEATDMAQSNTSKTPRAVCVGILKGGFGKT TTALNLARELAHRNEKALLVDLDDNGHLTLNLGHRDAYQNGSGGDNENHAEAVLVNEADPRDYIVNVAGGLDLFPSHADL EGVESTLKDAVQGSARLKQHLVEPLLGEDYDYVVIDCPANRGKLNDNAMFATGNLIIPLRPELGYETGLDNTVNRLVKPA RRYFDLDILAVVPSDLQRRIDQATLDQELLKEITTRDGVASKVPNFAYISPEDWEATEAGEYDDGLPGIRHRDAINNSLR DANEPLRDFDRECDQLAAYDELAQIVEQGEVIRDE >Mature_354_residues ATVLYQTLKNQSTTSTSSTVSTVSVLSTVAFLSVVSTLEKLKELSTVVSGEATDMAQSNTSKTPRAVCVGILKGGFGKTT TALNLARELAHRNEKALLVDLDDNGHLTLNLGHRDAYQNGSGGDNENHAEAVLVNEADPRDYIVNVAGGLDLFPSHADLE GVESTLKDAVQGSARLKQHLVEPLLGEDYDYVVIDCPANRGKLNDNAMFATGNLIIPLRPELGYETGLDNTVNRLVKPAR RYFDLDILAVVPSDLQRRIDQATLDQELLKEITTRDGVASKVPNFAYISPEDWEATEAGEYDDGLPGIRHRDAINNSLRD ANEPLRDFDRECDQLAAYDELAQIVEQGEVIRDE
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 38768; Mature: 38636
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVLYQTLKNQSTTSTSSTVSTVSVLSTVAFLSVVSTLEKLKELSTVVSGEATDMAQSN CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC TSKTPRAVCVGILKGGFGKTTTALNLARELAHRNEKALLVDLDDNGHLTLNLGHRDAYQN CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCC GSGGDNENHAEAVLVNEADPRDYIVNVAGGLDLFPSHADLEGVESTLKDAVQGSARLKQH CCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH LVEPLLGEDYDYVVIDCPANRGKLNDNAMFATGNLIIPLRPELGYETGLDNTVNRLVKPA HHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH RRYFDLDILAVVPSDLQRRIDQATLDQELLKEITTRDGVASKVPNFAYISPEDWEATEAG HHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCC EYDDGLPGIRHRDAINNSLRDANEPLRDFDRECDQLAAYDELAQIVEQGEVIRDE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ATVLYQTLKNQSTTSTSSTVSTVSVLSTVAFLSVVSTLEKLKELSTVVSGEATDMAQSN HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC TSKTPRAVCVGILKGGFGKTTTALNLARELAHRNEKALLVDLDDNGHLTLNLGHRDAYQN CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCC GSGGDNENHAEAVLVNEADPRDYIVNVAGGLDLFPSHADLEGVESTLKDAVQGSARLKQH CCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH LVEPLLGEDYDYVVIDCPANRGKLNDNAMFATGNLIIPLRPELGYETGLDNTVNRLVKPA HHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHH RRYFDLDILAVVPSDLQRRIDQATLDQELLKEITTRDGVASKVPNFAYISPEDWEATEAG HHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCC EYDDGLPGIRHRDAINNSLRDANEPLRDFDRECDQLAAYDELAQIVEQGEVIRDE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]