| Definition | Halobacterium sp. NRC-1 plasmid pNRC200, complete sequence. |
|---|---|
| Accession | NC_002608 |
| Length | 365,425 |
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Identifier: 16120103
GI number: 16120103
Start: 132066
End: 132377
Strand: Direct
Name: Not Available
Synonym: VNG6155H
Alternate gene names: NA
Gene position: 132066-132377 (Clockwise)
Preceding gene: 16120102
Following gene: 16120104
Centisome position: 36.14
GC content: 58.97
Gene sequence:
>312_bases ATGACGACTGGCGAACAGACTGTGACTGAGGAAACGGCGGACCCATTCAAGACGCGAGCGTTCGAGTACGGGGAGGAAGC GACACAGTTCCCGTTCTACGTCCGAGAGGCAACTCTGGAAGCGTGGCAGGATGCTGACGACGTGGAGATCACACCGGCGC TCGTGCAAGACGGCGTGAAAGACGTCTCAACGTCGGAGAAACACGACGCAATGGTCCAGATGGCGCTAGATCATCCCGAC CTGCTCGTGGAGTACATCAAGGAGGCACGCGGCATCCCTGACGCGGATACGGACACATTCAGCGACGAGTAG
Upstream 100 bases:
>100_bases GGACTCCGAGGAGACTGAGGATAGTGAGGCGACCACGACCGCGTCGACGTCGACGGCGACGAGTGAGGAAACGACGAGTG ATGATGATACGGATGAATCG
Downstream 100 bases:
>100_bases CGGCGACCTGGTGTTTTTCGACTCTCGACACCCCGACGAATAGCTTTTAACGCACGGGCAGTAAGTGGGGACTGCGAGGG TGCGTGCGGGTGTCGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTTGEQTVTEETADPFKTRAFEYGEEATQFPFYVREATLEAWQDADDVEITPALVQDGVKDVSTSEKHDAMVQMALDHPD LLVEYIKEARGIPDADTDTFSDE
Sequences:
>Translated_103_residues MTTGEQTVTEETADPFKTRAFEYGEEATQFPFYVREATLEAWQDADDVEITPALVQDGVKDVSTSEKHDAMVQMALDHPD LLVEYIKEARGIPDADTDTFSDE >Mature_102_residues TTGEQTVTEETADPFKTRAFEYGEEATQFPFYVREATLEAWQDADDVEITPALVQDGVKDVSTSEKHDAMVQMALDHPDL LVEYIKEARGIPDADTDTFSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11563; Mature: 11431
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGEQTVTEETADPFKTRAFEYGEEATQFPFYVREATLEAWQDADDVEITPALVQDGVK CCCCCCHHHHHHCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCCCCEECHHHHHCCHH DVSTSEKHDAMVQMALDHPDLLVEYIKEARGIPDADTDTFSDE HCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TTGEQTVTEETADPFKTRAFEYGEEATQFPFYVREATLEAWQDADDVEITPALVQDGVK CCCCCHHHHHHCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCCCCEECHHHHHCCHH DVSTSEKHDAMVQMALDHPDLLVEYIKEARGIPDADTDTFSDE HCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA