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The map label for this gene is yccA_2

Identifier: 15836503

GI number: 15836503

Start: 1112402

End: 1113118

Strand: Direct

Name: yccA_2

Synonym: CPj0970

Alternate gene names: 15836503

Gene position: 1112402-1113118 (Clockwise)

Preceding gene: 15836502

Following gene: 15836505

Centisome position: 90.69

GC content: 41.14

Gene sequence:

>717_bases
ATGGGACTATATGATCGTGACTATATACAAGATTCTCGAGTGCAGGGAACTTTTGCTTCAAGAGTCTATGGGTGGATGAC
AGCAGGGCTAATCGTAACTTCATGTGTTGCCCTGGGTCTTTATTTTTCTGGATTATACAGAAGTTTATTTTCTTTTTGGT
GGGTGTGGTGTTTCGCTACGCTAGGCGTGTCTTTCTTTATCAACTCTAAAATCCAGACACTATCGGTTTCTGCTGTAGGG
GGCCTTTTCCTTCTCTACTCAACATTAGAAGGAATGTTTTTTGGAACCTTACTTCCTGTCTACGCTGCTCAATATGGCGG
AGGGGTGATCTGGGCCGCTTTTGGATCAGCAGCCTTGGTATTTGGCTTAGCAGCAGTATACGGAGCGTTTACAAAAAGCG
ATCTTACTAAAATTAGTAAGATTATGACTTTTGCTTTGATAGGACTTCTGCTAGTGACTCTAGTCTTTGCTGTGGTTTCG
ATGTTTGTATCTATGCCTTTAATCTACTTATTGATTTGCTATCTAGGGCTCGTCATCTTTGTTGGATTGACAGCTGCTGA
TGCGCAAGCAATTCGTCGGATTTCTTCTACTATAGGGGATAACAATACCTTGAGTTACAAACTCTCTTTGATGTTTGCTC
TTAAGATGTATTGCAATGTCATCATGGTATTTTGGTATCTGCTGCAGATTTTCTCATCTTCAGGAAACCGAGACTAA

Upstream 100 bases:

>100_bases
TGTTCTTGTTGATAGTAATAAATGTAGTTAGCATTTATCATGAGCTTTAAATTTGTTTTGCTCTATTTTTCAATTTCAAG
TGAGCAAATAGGAGGGTTCT

Downstream 100 bases:

>100_bases
ACAACGACTTAGATCTTTTCTACTTCAGGAAATAATTTGTTTAGAAAAAGATCTAAGTCGAATTCATTAAGATCCTTTAA
AGATTCCCCATAACCAATAA

Product: transport permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGLYDRDYIQDSRVQGTFASRVYGWMTAGLIVTSCVALGLYFSGLYRSLFSFWWVWCFATLGVSFFINSKIQTLSVSAVG
GLFLLYSTLEGMFFGTLLPVYAAQYGGGVIWAAFGSAALVFGLAAVYGAFTKSDLTKISKIMTFALIGLLLVTLVFAVVS
MFVSMPLIYLLICYLGLVIFVGLTAADAQAIRRISSTIGDNNTLSYKLSLMFALKMYCNVIMVFWYLLQIFSSSGNRD

Sequences:

>Translated_238_residues
MGLYDRDYIQDSRVQGTFASRVYGWMTAGLIVTSCVALGLYFSGLYRSLFSFWWVWCFATLGVSFFINSKIQTLSVSAVG
GLFLLYSTLEGMFFGTLLPVYAAQYGGGVIWAAFGSAALVFGLAAVYGAFTKSDLTKISKIMTFALIGLLLVTLVFAVVS
MFVSMPLIYLLICYLGLVIFVGLTAADAQAIRRISSTIGDNNTLSYKLSLMFALKMYCNVIMVFWYLLQIFSSSGNRD
>Mature_237_residues
GLYDRDYIQDSRVQGTFASRVYGWMTAGLIVTSCVALGLYFSGLYRSLFSFWWVWCFATLGVSFFINSKIQTLSVSAVGG
LFLLYSTLEGMFFGTLLPVYAAQYGGGVIWAAFGSAALVFGLAAVYGAFTKSDLTKISKIMTFALIGLLLVTLVFAVVSM
FVSMPLIYLLICYLGLVIFVGLTAADAQAIRRISSTIGDNNTLSYKLSLMFALKMYCNVIMVFWYLLQIFSSSGNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=243, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26193; Mature: 26062

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYDRDYIQDSRVQGTFASRVYGWMTAGLIVTSCVALGLYFSGLYRSLFSFWWVWCFAT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVSFFINSKIQTLSVSAVGGLFLLYSTLEGMFFGTLLPVYAAQYGGGVIWAAFGSAALV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGLAAVYGAFTKSDLTKISKIMTFALIGLLLVTLVFAVVSMFVSMPLIYLLICYLGLVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAADAQAIRRISSTIGDNNTLSYKLSLMFALKMYCNVIMVFWYLLQIFSSSGNRD
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GLYDRDYIQDSRVQGTFASRVYGWMTAGLIVTSCVALGLYFSGLYRSLFSFWWVWCFAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVSFFINSKIQTLSVSAVGGLFLLYSTLEGMFFGTLLPVYAAQYGGGVIWAAFGSAALV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGLAAVYGAFTKSDLTKISKIMTFALIGLLLVTLVFAVVSMFVSMPLIYLLICYLGLVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLTAADAQAIRRISSTIGDNNTLSYKLSLMFALKMYCNVIMVFWYLLQIFSSSGNRD
HHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]