| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836445
GI number: 15836445
Start: 1043450
End: 1045111
Strand: Direct
Name: Not Available
Synonym: CPj0912
Alternate gene names: NA
Gene position: 1043450-1045111 (Clockwise)
Preceding gene: 15836443
Following gene: 15836446
Centisome position: 85.07
GC content: 38.15
Gene sequence:
>1662_bases ATGGATAATTCAGACAACAGCTTTCATACTTTGGAAACGGAGCAGGGATCGTTTTTAAACGATGAATTAGCAGTCGAAGA AGTGGCGTATACAGAAAGCACAGAAATTTCTGATGCGACATTATGTTTCGCTGATGAGATTCAAGAGCTCCCCTCCCCAG AAAAGAAAGTTGCTTTTATCTTGAATAAGATGAGGGAAGCCTTAACAGGATCATCTCAAGGCTCAGACTTAAGGTTGTTT TGGGATTTAAGGAAGCAATGCCTCCCCTTATTTAATGAAATCGAAGATACCGCGAAACGGGCAGATCATTGGCGTTGTTA TATCGAGTTGACTAAGGAAGGCCGTCATCTCAAGGGTCTTCAGGATGAAGAAGGGTCTTTTGTCGTTGGTCAGATTGATT TGGCAATCACATGTCTAGAAAAAGATATTCTTAAGTTCCAAGAAGGAACAGAAGATAAAATTTTCAAAGATAGAGAAGAT AATTTCTTAGAAAGCCAAGCTCTAGATAAACATCAGGCTTTTTATAAGCAGCATCATACCTCATTGCTATGGTTAAGTAG TTTTTCTTCAAAAATCATAGATCTCCGCAAGGAACTGATAAATGTTGGGATGCGGATGCGGTTGAAGAGTAAATTTTTTC AACGTCTCTCTAATTTAGGAAATCAGGTGTTTCCTAAACGAAAGGAACTGATCGAAAAAGTAAGTCAAACATTTGCAGAA GATGTTGATGCATTTGTCGCTAAATATTTTATTGGATCCGATAAAGAAACATTGAAAAAAACGGTTTTTTTTTTAAGAAA AGAAATCAAAAACCTTCAACACGCAGCAAAAAGACTTTTTGTCTCATCGCATGTTTTTGCTGAAACACGATTGAAACTCA GTAAGTGCTGGGATCAGCTCAAGGGGATGGAAAAAGAAATTCGCCAAGAGCAAGGCCGCTTACGTGTTGTATCTGCTGAA AATTCAAAAGAAGTTCGCCAGATGTTAGCTGAGGTCTCTTCTCTTCTTATTGAGGGAAATGATCTGAGTAAAGTTCGTAA AGACTTGGAGGGCATTTCTAAGAAAATTCGAGCTCTTGATCTTACGCACGATGATGTCATCTCTTTGAAAAAAGAAATGC AACAATTATTTGATCAATTACGAGAGAAACAAGACGCGGCAGAGCATTCCTATCAAGAGCAATTAGCTAAAGATAAACAA GTCAAGAAAGAAGCGGCTCGCTCTCTTGCTGAGCGCATCACAACATTCTCAAAAACTTGCTCCGAAGGGAACATTACTTC CGAATCTCGAGAAGAATGGCAGACATTGAAAGAGCTCTTAGGTAAAATGTCTTTTTTACCTCCTCCTGAAAAAATTTCTT TAGATAATCAACTCAATCTTGCTCTTCAAACTATTGTTAACTTCTTTGAAGAACAACTTCTCTCTTCTCCAGATTCTCGA GAAAAGCTTGTGAATATGCGCCAAGTATTGAAGCAAAGACGAGAGCGTCGTCAAGAACTTAAAGATAAATTAGAGCAGGA CAAAAAATTATTAGGGTCTTCAGGATTAGATTTTGATCGGGCCATGCAGTATAGTGCTCTAGTTGAAGAAGACAAGCGTG CTCTTGAAGAATTGGATGCAAGTATTTTAGAATTGAAGCAACAGATTCAGCAATTGCTATGA
Upstream 100 bases:
>100_bases TTTACATAAATTCATAAAATAATTGACGTTAAAGATTGCTAGCAGCAGACTTTAAGTTTTAACAATTTTATTTGTCAAGC CCCACACCTAAGTTGTTATT
Downstream 100 bases:
>100_bases GAAGAAACTGTATATATGCTTTTGATTTAGACGGAACCTTATTGAAGGGGAATAGCAGCTGGAGTTTTTATTGCTACGGC TTACTTCAAGGTTTGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MDNSDNSFHTLETEQGSFLNDELAVEEVAYTESTEISDATLCFADEIQELPSPEKKVAFILNKMREALTGSSQGSDLRLF WDLRKQCLPLFNEIEDTAKRADHWRCYIELTKEGRHLKGLQDEEGSFVVGQIDLAITCLEKDILKFQEGTEDKIFKDRED NFLESQALDKHQAFYKQHHTSLLWLSSFSSKIIDLRKELINVGMRMRLKSKFFQRLSNLGNQVFPKRKELIEKVSQTFAE DVDAFVAKYFIGSDKETLKKTVFFLRKEIKNLQHAAKRLFVSSHVFAETRLKLSKCWDQLKGMEKEIRQEQGRLRVVSAE NSKEVRQMLAEVSSLLIEGNDLSKVRKDLEGISKKIRALDLTHDDVISLKKEMQQLFDQLREKQDAAEHSYQEQLAKDKQ VKKEAARSLAERITTFSKTCSEGNITSESREEWQTLKELLGKMSFLPPPEKISLDNQLNLALQTIVNFFEEQLLSSPDSR EKLVNMRQVLKQRRERRQELKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDASILELKQQIQQLL
Sequences:
>Translated_553_residues MDNSDNSFHTLETEQGSFLNDELAVEEVAYTESTEISDATLCFADEIQELPSPEKKVAFILNKMREALTGSSQGSDLRLF WDLRKQCLPLFNEIEDTAKRADHWRCYIELTKEGRHLKGLQDEEGSFVVGQIDLAITCLEKDILKFQEGTEDKIFKDRED NFLESQALDKHQAFYKQHHTSLLWLSSFSSKIIDLRKELINVGMRMRLKSKFFQRLSNLGNQVFPKRKELIEKVSQTFAE DVDAFVAKYFIGSDKETLKKTVFFLRKEIKNLQHAAKRLFVSSHVFAETRLKLSKCWDQLKGMEKEIRQEQGRLRVVSAE NSKEVRQMLAEVSSLLIEGNDLSKVRKDLEGISKKIRALDLTHDDVISLKKEMQQLFDQLREKQDAAEHSYQEQLAKDKQ VKKEAARSLAERITTFSKTCSEGNITSESREEWQTLKELLGKMSFLPPPEKISLDNQLNLALQTIVNFFEEQLLSSPDSR EKLVNMRQVLKQRRERRQELKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDASILELKQQIQQLL >Mature_553_residues MDNSDNSFHTLETEQGSFLNDELAVEEVAYTESTEISDATLCFADEIQELPSPEKKVAFILNKMREALTGSSQGSDLRLF WDLRKQCLPLFNEIEDTAKRADHWRCYIELTKEGRHLKGLQDEEGSFVVGQIDLAITCLEKDILKFQEGTEDKIFKDRED NFLESQALDKHQAFYKQHHTSLLWLSSFSSKIIDLRKELINVGMRMRLKSKFFQRLSNLGNQVFPKRKELIEKVSQTFAE DVDAFVAKYFIGSDKETLKKTVFFLRKEIKNLQHAAKRLFVSSHVFAETRLKLSKCWDQLKGMEKEIRQEQGRLRVVSAE NSKEVRQMLAEVSSLLIEGNDLSKVRKDLEGISKKIRALDLTHDDVISLKKEMQQLFDQLREKQDAAEHSYQEQLAKDKQ VKKEAARSLAERITTFSKTCSEGNITSESREEWQTLKELLGKMSFLPPPEKISLDNQLNLALQTIVNFFEEQLLSSPDSR EKLVNMRQVLKQRRERRQELKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDASILELKQQIQQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64159; Mature: 64159
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNSDNSFHTLETEQGSFLNDELAVEEVAYTESTEISDATLCFADEIQELPSPEKKVAFI CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNKMREALTGSSQGSDLRLFWDLRKQCLPLFNEIEDTAKRADHWRCYIELTKEGRHLKGL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC QDEEGSFVVGQIDLAITCLEKDILKFQEGTEDKIFKDREDNFLESQALDKHQAFYKQHHT CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SLLWLSSFSSKIIDLRKELINVGMRMRLKSKFFQRLSNLGNQVFPKRKELIEKVSQTFAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHH DVDAFVAKYFIGSDKETLKKTVFFLRKEIKNLQHAAKRLFVSSHVFAETRLKLSKCWDQL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGMEKEIRQEQGRLRVVSAENSKEVRQMLAEVSSLLIEGNDLSKVRKDLEGISKKIRALD HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC LTHDDVISLKKEMQQLFDQLREKQDAAEHSYQEQLAKDKQVKKEAARSLAERITTFSKTC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEGNITSESREEWQTLKELLGKMSFLPPPEKISLDNQLNLALQTIVNFFEEQLLSSPDSR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EKLVNMRQVLKQRRERRQELKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SILELKQQIQQLL HHHHHHHHHHHHC >Mature Secondary Structure MDNSDNSFHTLETEQGSFLNDELAVEEVAYTESTEISDATLCFADEIQELPSPEKKVAFI CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LNKMREALTGSSQGSDLRLFWDLRKQCLPLFNEIEDTAKRADHWRCYIELTKEGRHLKGL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCC QDEEGSFVVGQIDLAITCLEKDILKFQEGTEDKIFKDREDNFLESQALDKHQAFYKQHHT CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SLLWLSSFSSKIIDLRKELINVGMRMRLKSKFFQRLSNLGNQVFPKRKELIEKVSQTFAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHH DVDAFVAKYFIGSDKETLKKTVFFLRKEIKNLQHAAKRLFVSSHVFAETRLKLSKCWDQL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGMEKEIRQEQGRLRVVSAENSKEVRQMLAEVSSLLIEGNDLSKVRKDLEGISKKIRALD HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC LTHDDVISLKKEMQQLFDQLREKQDAAEHSYQEQLAKDKQVKKEAARSLAERITTFSKTC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEGNITSESREEWQTLKELLGKMSFLPPPEKISLDNQLNLALQTIVNFFEEQLLSSPDSR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH EKLVNMRQVLKQRRERRQELKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SILELKQQIQQLL HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA