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The map label for this gene is rsbV_2

Identifier: 15836442

GI number: 15836442

Start: 1040958

End: 1041290

Strand: Direct

Name: rsbV_2

Synonym: CPj0909

Alternate gene names: NA

Gene position: 1040958-1041290 (Clockwise)

Preceding gene: 15836438

Following gene: 15836443

Centisome position: 84.87

GC content: 37.84

Gene sequence:

>333_bases
ATGAATTTATCAGCTAAAGAATACGGAGATATCATTGTTATTTATTTACAAGGATCTTTAGATGCCGTCTCAGTGCCTAG
TGTTCAAGAGTATTTAGAGCAGTTTATACAGAAGAAACATCTTAAAATTGCTCTGAATGTTACAGATGTCTCGTATATCA
GTAGCGCAGGGATTCGTCTACTGCTGTCTAATTTTAAATTGGTTCAGAGCTTGGGAGGAAAAATGTGCCTATGCTGTGTC
AAAGAGAGTGTAACCGAAGTCATGCGGATTGCAGGTTTAGACCAATTGATCTTGCTCTGCCAGTCTGAACAGGAATGTTT
AAGTAAGTTATAG

Upstream 100 bases:

>100_bases
AGCGTTTTGAAAAAACGTCTTATCATGAGCTCATTGTTTTTTATTATGATCATAAATAATATCGCTAATATTTACGAGAT
TCCTCTTGGAGAGATTACTG

Downstream 100 bases:

>100_bases
TTTCTCTATATGCTTCCTTTTGAATTCGAGTTTAATACAACTTCTTCTCCTGAATGCGACGTATGCCTTGATCCTCAGAA
GTTATTTGTAAAGCTATTTA

Product: sigma regulatory factor

Products: NA

Alternate protein names: Sigma Regulatory Factor; Anti-Anti-Sigma Factor; Regulatory Protein; Sigma-F 5-Region Regulatory Protein SpoIIAA; Anti-Sigma-Factor Antagonist

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIALNVTDVSYISSAGIRLLLSNFKLVQSLGGKMCLCCV
KESVTEVMRIAGLDQLILLCQSEQECLSKL

Sequences:

>Translated_110_residues
MNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIALNVTDVSYISSAGIRLLLSNFKLVQSLGGKMCLCCV
KESVTEVMRIAGLDQLILLCQSEQECLSKL
>Mature_110_residues
MNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIALNVTDVSYISSAGIRLLLSNFKLVQSLGGKMCLCCV
KESVTEVMRIAGLDQLILLCQSEQECLSKL

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12170; Mature: 12170

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIALNVTDVSYISSAGIRL
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH
LLSNFKLVQSLGGKMCLCCVKESVTEVMRIAGLDQLILLCQSEQECLSKL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MNLSAKEYGDIIVIYLQGSLDAVSVPSVQEYLEQFIQKKHLKIALNVTDVSYISSAGIRL
CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH
LLSNFKLVQSLGGKMCLCCVKESVTEVMRIAGLDQLILLCQSEQECLSKL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA