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The map label for this gene is rodA

Identifier: 15836400

GI number: 15836400

Start: 982744

End: 983991

Strand: Direct

Name: rodA

Synonym: CPj0867

Alternate gene names: 15836400

Gene position: 982744-983991 (Clockwise)

Preceding gene: 15836398

Following gene: 15836404

Centisome position: 80.12

GC content: 41.35

Gene sequence:

>1248_bases
ATGCATATAGGATTTTGCCATTGTGTTCGTGGAGGGAATTTCTTCTATTTCGTAATAAATAACTTTCATATTCTAGAAAT
TTACAGTCTGCTCAATAGTAATACGATTATGAGATATCATAAATATTTTCGGTATGTGAATTCTTGGGTTTTTCTTGTCG
TACTTACCTTAATGCTATTAAGTGTTGTGGTCATTTCTTCAATGGATCCTACAGCGATGCTGGTGACCTCCTCCAAAGGC
CTCTTGACCAATAAAAGTATCATGCAGCTCAGGCATTTCGCTCTAGGATGGGTCGTTTTTTTTATCTGTGCCTACTTCGA
TTATCACTTATTTAAACGATGGGCATGGGTACTCTACTTTTTCATGATTTGTGCTCTCGTGGGCCTTTTTTTTGTTCCGT
CAGTCCAAAATGTCCATAGATGGTACCGTATTCCTTTCATCCATATGAGCGTACAGCCCTCAGAATATGGAAAGCTTGTG
ATCGTGATAATGCTCAGTTATATCTTGGAATCCCGAAAAGCAGATATTACATCGAAAACAACAGCATTCCTTGCTTGCTT
AGTTGTCGCACTTCCGTTCTTTCTAATTTTAAAAGAGCCTGATTTAGGAACCGCATTAGTCTTATGTCCTGTGACATTGA
CGATTTTCTATTTAAGTAATGTCCATTCTTTACTAGTAAAATTTTGTACAGTGGTCGCTACCATCGGAATTATAGGCTCG
TTATTGATTTTTTCAGGAATCGTCTCACATCAGAAAGTGAAACCCTATGCTCTGAAAGTCATCAAGGAATATCAATACGA
GCGACTCAGCCCGTCAAATCATCACCAACGCGCGTCTCTCATTTCTATAGGGCTGGGAGGAATTCGAGGTCGTGGATGGA
AAACTGGGGAGTTTGCAGGTCGTGGATGGCTACCCTACGGCTACACAGACTCTGTATTCTCGGCATTAGGAGAGGAATTC
GGGTTGCTGGGGCTACTCTTTACTCTAGGGCTATTTTATTGTCTTATCTGTTTTGGTTGTCGAACTGTTGCAGTCGCCAC
TGATGACTTTGGAAAACTCCTCGCTGCTGGCATTACCGTATACCTAGCGATGCACGTCTTAATCAATATTAGCATGATGT
GCGGGCTGCTACCTATCACAGGAGTCCCTCTGATTCTAATTTCCTATGGGGGCTCTTCGGTAATCTCTACAATGGCATCC
CTTGGTGTATTGCAAAGTATCTATAGCCATCGCTTTGCTAAGTACTAA

Upstream 100 bases:

>100_bases
GAAGATCCCCCTTTGAAGATTTCCAGCTTTTACCAAATTTTCCTGTGCCCGCAGTTTGACATTTTGTGGAGATTACAGTT
AATGCATAAGGATCCCACAA

Downstream 100 bases:

>100_bases
CTTTTCAGCAAACGGAGAGCATTTAACCCCACAATCACCGTACTTCCCTCATGAAGAATTACCGCGAGCCATAGAGGAAT
GATCCCTAACGATGCAGGCC

Product: rod shape protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MHIGFCHCVRGGNFFYFVINNFHILEIYSLLNSNTIMRYHKYFRYVNSWVFLVVLTLMLLSVVVISSMDPTAMLVTSSKG
LLTNKSIMQLRHFALGWVVFFICAYFDYHLFKRWAWVLYFFMICALVGLFFVPSVQNVHRWYRIPFIHMSVQPSEYGKLV
IVIMLSYILESRKADITSKTTAFLACLVVALPFFLILKEPDLGTALVLCPVTLTIFYLSNVHSLLVKFCTVVATIGIIGS
LLIFSGIVSHQKVKPYALKVIKEYQYERLSPSNHHQRASLISIGLGGIRGRGWKTGEFAGRGWLPYGYTDSVFSALGEEF
GLLGLLFTLGLFYCLICFGCRTVAVATDDFGKLLAAGITVYLAMHVLINISMMCGLLPITGVPLILISYGGSSVISTMAS
LGVLQSIYSHRFAKY

Sequences:

>Translated_415_residues
MHIGFCHCVRGGNFFYFVINNFHILEIYSLLNSNTIMRYHKYFRYVNSWVFLVVLTLMLLSVVVISSMDPTAMLVTSSKG
LLTNKSIMQLRHFALGWVVFFICAYFDYHLFKRWAWVLYFFMICALVGLFFVPSVQNVHRWYRIPFIHMSVQPSEYGKLV
IVIMLSYILESRKADITSKTTAFLACLVVALPFFLILKEPDLGTALVLCPVTLTIFYLSNVHSLLVKFCTVVATIGIIGS
LLIFSGIVSHQKVKPYALKVIKEYQYERLSPSNHHQRASLISIGLGGIRGRGWKTGEFAGRGWLPYGYTDSVFSALGEEF
GLLGLLFTLGLFYCLICFGCRTVAVATDDFGKLLAAGITVYLAMHVLINISMMCGLLPITGVPLILISYGGSSVISTMAS
LGVLQSIYSHRFAKY
>Mature_415_residues
MHIGFCHCVRGGNFFYFVINNFHILEIYSLLNSNTIMRYHKYFRYVNSWVFLVVLTLMLLSVVVISSMDPTAMLVTSSKG
LLTNKSIMQLRHFALGWVVFFICAYFDYHLFKRWAWVLYFFMICALVGLFFVPSVQNVHRWYRIPFIHMSVQPSEYGKLV
IVIMLSYILESRKADITSKTTAFLACLVVALPFFLILKEPDLGTALVLCPVTLTIFYLSNVHSLLVKFCTVVATIGIIGS
LLIFSGIVSHQKVKPYALKVIKEYQYERLSPSNHHQRASLISIGLGGIRGRGWKTGEFAGRGWLPYGYTDSVFSALGEEF
GLLGLLFTLGLFYCLICFGCRTVAVATDDFGKLLAAGITVYLAMHVLINISMMCGLLPITGVPLILISYGGSSVISTMAS
LGVLQSIYSHRFAKY

Specific function: This is one of the proteins responsible for the rod shape of the cell. It is required for the expression of the enzymatic activity of PBP2, which is thought to synthesize peptidoglycan in the step of initiation of cell elongation [H]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family [H]

Homologues:

Organism=Escherichia coli, GI1786853, Length=342, Percent_Identity=30.1169590643275, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1786277, Length=301, Percent_Identity=28.2392026578073, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001182
- InterPro:   IPR018365
- InterPro:   IPR011923 [H]

Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]

EC number: NA

Molecular weight: Translated: 46663; Mature: 46663

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00428 FTSW_RODA_SPOVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIGFCHCVRGGNFFYFVINNFHILEIYSLLNSNTIMRYHKYFRYVNSWVFLVVLTLMLL
CCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVVISSMDPTAMLVTSSKGLLTNKSIMQLRHFALGWVVFFICAYFDYHLFKRWAWVLYF
HHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMICALVGLFFVPSVQNVHRWYRIPFIHMSVQPSEYGKLVIVIMLSYILESRKADITSKT
HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCHHHH
TAFLACLVVALPFFLILKEPDLGTALVLCPVTLTIFYLSNVHSLLVKFCTVVATIGIIGS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFSGIVSHQKVKPYALKVIKEYQYERLSPSNHHQRASLISIGLGGIRGRGWKTGEFAG
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
RGWLPYGYTDSVFSALGEEFGLLGLLFTLGLFYCLICFGCRTVAVATDDFGKLLAAGITV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHH
YLAMHVLINISMMCGLLPITGVPLILISYGGSSVISTMASLGVLQSIYSHRFAKY
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHIGFCHCVRGGNFFYFVINNFHILEIYSLLNSNTIMRYHKYFRYVNSWVFLVVLTLMLL
CCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVVISSMDPTAMLVTSSKGLLTNKSIMQLRHFALGWVVFFICAYFDYHLFKRWAWVLYF
HHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMICALVGLFFVPSVQNVHRWYRIPFIHMSVQPSEYGKLVIVIMLSYILESRKADITSKT
HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCHHCHHHHHHHHHHHHHHHHCCCHHHH
TAFLACLVVALPFFLILKEPDLGTALVLCPVTLTIFYLSNVHSLLVKFCTVVATIGIIGS
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFSGIVSHQKVKPYALKVIKEYQYERLSPSNHHQRASLISIGLGGIRGRGWKTGEFAG
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
RGWLPYGYTDSVFSALGEEFGLLGLLFTLGLFYCLICFGCRTVAVATDDFGKLLAAGITV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHH
YLAMHVLINISMMCGLLPITGVPLILISYGGSSVISTMASLGVLQSIYSHRFAKY
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]