Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836325

GI number: 15836325

Start: 892426

End: 894240

Strand: Reverse

Name: Not Available

Synonym: CPj0792

Alternate gene names: NA

Gene position: 894240-892426 (Counterclockwise)

Preceding gene: 15836326

Following gene: 15836324

Centisome position: 72.91

GC content: 40.72

Gene sequence:

>1815_bases
ATGAAACATACCTTTACCAAGCGTGTTCTATTTTTTTTCTTTTTAGTGATTCCCATTCCCCTACTCCTCAATCTTATGGT
CGTAGGTTTTTTCTCATTTTCTGCCGCTAAAGCAAATTTAGTACAGGTCCTCCATACCCGTGCTACGAACTTAAGTATAG
AATTCGAAAAAAAACTGACGATACACAAGCTTTTCCTCGATAGACTTGCCAACACATTAGCCTTAAAATCCTATGCATCT
CCTTCTGCAGAGCCCTATGCACAGGCATACAATGAGATGATGGCACTCTCCAATACAGACTTTTCCTTATGCCTTATAGA
TCCCTTTGATGGATCTGTAAGGACGAAAAATCCTGGAGACCCTTTCATTCGCTATCTAAAACAGCATCCTGAAATGAAGA
AAAAGCTATCCGCAGCTGTAGGGAAAGCCTTTTTATTGACCATTCCAGGTAAACCACTTTTACATTATCTTATTCTAGTT
GAAGATGTCGCATCTTGGGATTCTACAACGACTTCAGGACTGCTTGTAAGTTTCTATCCCATGTCTTTTTTACAGAAAGA
TTTATTCCAATCCTTACACATCACCAAAGGAAATATCTGCCTTGTAAATAAGTATGGCGAGGTCCTCTTCTGTGCTCAGG
ACAGTGAATCTTCTTTTGTATTTTCTCTAGATCTCCCTAATTTACCGCAATTCCAAGCAAGAAGCCCCTCTGCCATAGAA
ATTGAGAAAGCTTCTGGAATTCTTGGTGGGGAGAACCTAATCACAGTGAGTATCAACAAGAAACGCTACCTAGGATTGGT
ACTGAATAAAATTCCTATCCAAGGGACCTACACTCTATCTTTAGTTCCAGTTTCTGATCTCATCCAATCCGCCTTGAAAG
TTCCTCTCAATATTTGTTTTTTCTATGTACTTGCTTTCCTCCTCATGTGGTGGATTTTCTCTAAGATCAACACCAAACTT
AACAAGCCTCTTCAAGAACTGACCTTCTGTATGGAAGCTGCCTGGCGAGGAAACCATAACGTGAGGTTTGAACCCCAGCC
TTACGGTTATGAATTCAATGAACTAGGAAATATTTTCAATTGCACTCTCCTACTCTTATTGAATTCCATTGAGAAAGCAG
ATATCGATTACCATTCAGGCGAAAAATTACAAAAAGAATTAGGGATTTTATCTTCACTACAAAGTGCGTTACTAAGTCCG
GATTTCCCTACGTTCCCTAAAGTTACCTTTAGTTCCCAACATCTCCGGAGAAGGCAACTTTCCGGTCATTTTAATGGTTG
GACAGTTCAAGATGGTGGCGATACCCTTTTAGGGATCATAGGGCTCGCTGGCGATATTGGTCTTCCTTCCTATCTCTATG
CTTTATCCGCACGGAGTCTTTTTCTTGCCTATGCTTCCTCGGACGTTTCGTTACAAAAAATCAGCAAGGATACTGCCGAC
AGCTTCTCAAAAACAACAGAAGGCAATGAGGCTGTAGTTGCTATGACTTTCATTAAATATGTAGAAAAAGATCGATCTCT
AGAGCTCCTCTCGTTAAGCGAGGGAGCTCCTACCATGTTTCTACAACGAGGAGAATCTTTCGTACGTCTCCCCTTAGAGA
CTCACCAAGCTCTACAGCCTGGAGATCGGTTGATCTGCCTCACTGGAGGAGAAGACATCCTCAAGTACTTTTCTCAGCTT
CCTATTGAAGAGCTCTTAAAAGATCCTTTAAACCCTCTAAATACAGAGAATCTTATTGATTCTCTAACCATGATGTTAAA
CAACGAAACCGAACATTCTGCAGATGGAACTCTGACCATCCTTTCATTTTCATAA

Upstream 100 bases:

>100_bases
CTGATGCCGTCCACAGGTTGATGTTAAGTGTAAAACCCTTTGTCGGGAACTCCCATCAACATGACGACATCACCTTATTA
ATATTAAAGGTATTAGAATC

Downstream 100 bases:

>100_bases
ACTTGCCTTCGGAGCTCTAGAAAAATAGTAGTGGAGGATATCAGTGACAGAAACATGTATTCGTGTTACAGCAAAGGAAT
ATCCCATAACTATCTTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MKHTFTKRVLFFFFLVIPIPLLLNLMVVGFFSFSAAKANLVQVLHTRATNLSIEFEKKLTIHKLFLDRLANTLALKSYAS
PSAEPYAQAYNEMMALSNTDFSLCLIDPFDGSVRTKNPGDPFIRYLKQHPEMKKKLSAAVGKAFLLTIPGKPLLHYLILV
EDVASWDSTTTSGLLVSFYPMSFLQKDLFQSLHITKGNICLVNKYGEVLFCAQDSESSFVFSLDLPNLPQFQARSPSAIE
IEKASGILGGENLITVSINKKRYLGLVLNKIPIQGTYTLSLVPVSDLIQSALKVPLNICFFYVLAFLLMWWIFSKINTKL
NKPLQELTFCMEAAWRGNHNVRFEPQPYGYEFNELGNIFNCTLLLLLNSIEKADIDYHSGEKLQKELGILSSLQSALLSP
DFPTFPKVTFSSQHLRRRQLSGHFNGWTVQDGGDTLLGIIGLAGDIGLPSYLYALSARSLFLAYASSDVSLQKISKDTAD
SFSKTTEGNEAVVAMTFIKYVEKDRSLELLSLSEGAPTMFLQRGESFVRLPLETHQALQPGDRLICLTGGEDILKYFSQL
PIEELLKDPLNPLNTENLIDSLTMMLNNETEHSADGTLTILSFS

Sequences:

>Translated_604_residues
MKHTFTKRVLFFFFLVIPIPLLLNLMVVGFFSFSAAKANLVQVLHTRATNLSIEFEKKLTIHKLFLDRLANTLALKSYAS
PSAEPYAQAYNEMMALSNTDFSLCLIDPFDGSVRTKNPGDPFIRYLKQHPEMKKKLSAAVGKAFLLTIPGKPLLHYLILV
EDVASWDSTTTSGLLVSFYPMSFLQKDLFQSLHITKGNICLVNKYGEVLFCAQDSESSFVFSLDLPNLPQFQARSPSAIE
IEKASGILGGENLITVSINKKRYLGLVLNKIPIQGTYTLSLVPVSDLIQSALKVPLNICFFYVLAFLLMWWIFSKINTKL
NKPLQELTFCMEAAWRGNHNVRFEPQPYGYEFNELGNIFNCTLLLLLNSIEKADIDYHSGEKLQKELGILSSLQSALLSP
DFPTFPKVTFSSQHLRRRQLSGHFNGWTVQDGGDTLLGIIGLAGDIGLPSYLYALSARSLFLAYASSDVSLQKISKDTAD
SFSKTTEGNEAVVAMTFIKYVEKDRSLELLSLSEGAPTMFLQRGESFVRLPLETHQALQPGDRLICLTGGEDILKYFSQL
PIEELLKDPLNPLNTENLIDSLTMMLNNETEHSADGTLTILSFS
>Mature_604_residues
MKHTFTKRVLFFFFLVIPIPLLLNLMVVGFFSFSAAKANLVQVLHTRATNLSIEFEKKLTIHKLFLDRLANTLALKSYAS
PSAEPYAQAYNEMMALSNTDFSLCLIDPFDGSVRTKNPGDPFIRYLKQHPEMKKKLSAAVGKAFLLTIPGKPLLHYLILV
EDVASWDSTTTSGLLVSFYPMSFLQKDLFQSLHITKGNICLVNKYGEVLFCAQDSESSFVFSLDLPNLPQFQARSPSAIE
IEKASGILGGENLITVSINKKRYLGLVLNKIPIQGTYTLSLVPVSDLIQSALKVPLNICFFYVLAFLLMWWIFSKINTKL
NKPLQELTFCMEAAWRGNHNVRFEPQPYGYEFNELGNIFNCTLLLLLNSIEKADIDYHSGEKLQKELGILSSLQSALLSP
DFPTFPKVTFSSQHLRRRQLSGHFNGWTVQDGGDTLLGIIGLAGDIGLPSYLYALSARSLFLAYASSDVSLQKISKDTAD
SFSKTTEGNEAVVAMTFIKYVEKDRSLELLSLSEGAPTMFLQRGESFVRLPLETHQALQPGDRLICLTGGEDILKYFSQL
PIEELLKDPLNPLNTENLIDSLTMMLNNETEHSADGTLTILSFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67520; Mature: 67520

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTFTKRVLFFFFLVIPIPLLLNLMVVGFFSFSAAKANLVQVLHTRATNLSIEFEKKLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
IHKLFLDRLANTLALKSYASPSAEPYAQAYNEMMALSNTDFSLCLIDPFDGSVRTKNPGD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
PFIRYLKQHPEMKKKLSAAVGKAFLLTIPGKPLLHYLILVEDVASWDSTTTSGLLVSFYP
HHHHHHHHCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
MSFLQKDLFQSLHITKGNICLVNKYGEVLFCAQDSESSFVFSLDLPNLPQFQARSPSAIE
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE
IEKASGILGGENLITVSINKKRYLGLVLNKIPIQGTYTLSLVPVSDLIQSALKVPLNICF
EECCCCCCCCCCEEEEEECCCCEEHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
FYVLAFLLMWWIFSKINTKLNKPLQELTFCMEAAWRGNHNVRFEPQPYGYEFNELGNIFN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCHHH
CTLLLLLNSIEKADIDYHSGEKLQKELGILSSLQSALLSPDFPTFPKVTFSSQHLRRRQL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
SGHFNGWTVQDGGDTLLGIIGLAGDIGLPSYLYALSARSLFLAYASSDVSLQKISKDTAD
CCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHH
SFSKTTEGNEAVVAMTFIKYVEKDRSLELLSLSEGAPTMFLQRGESFVRLPLETHQALQP
HHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEECCHHHHHHCCC
GDRLICLTGGEDILKYFSQLPIEELLKDPLNPLNTENLIDSLTMMLNNETEHSADGTLTI
CCEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
LSFS
EEEC
>Mature Secondary Structure
MKHTFTKRVLFFFFLVIPIPLLLNLMVVGFFSFSAAKANLVQVLHTRATNLSIEFEKKLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHH
IHKLFLDRLANTLALKSYASPSAEPYAQAYNEMMALSNTDFSLCLIDPFDGSVRTKNPGD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
PFIRYLKQHPEMKKKLSAAVGKAFLLTIPGKPLLHYLILVEDVASWDSTTTSGLLVSFYP
HHHHHHHHCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHH
MSFLQKDLFQSLHITKGNICLVNKYGEVLFCAQDSESSFVFSLDLPNLPQFQARSPSAIE
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE
IEKASGILGGENLITVSINKKRYLGLVLNKIPIQGTYTLSLVPVSDLIQSALKVPLNICF
EECCCCCCCCCCEEEEEECCCCEEHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHH
FYVLAFLLMWWIFSKINTKLNKPLQELTFCMEAAWRGNHNVRFEPQPYGYEFNELGNIFN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCHHH
CTLLLLLNSIEKADIDYHSGEKLQKELGILSSLQSALLSPDFPTFPKVTFSSQHLRRRQL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
SGHFNGWTVQDGGDTLLGIIGLAGDIGLPSYLYALSARSLFLAYASSDVSLQKISKDTAD
CCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHH
SFSKTTEGNEAVVAMTFIKYVEKDRSLELLSLSEGAPTMFLQRGESFVRLPLETHQALQP
HHHCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEECCHHHHHHCCC
GDRLICLTGGEDILKYFSQLPIEELLKDPLNPLNTENLIDSLTMMLNNETEHSADGTLTI
CCEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
LSFS
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA