| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836324
GI number: 15836324
Start: 889429
End: 892371
Strand: Reverse
Name: Not Available
Synonym: CPj0791
Alternate gene names: NA
Gene position: 892371-889429 (Counterclockwise)
Preceding gene: 15836325
Following gene: 15836318
Centisome position: 72.75
GC content: 42.24
Gene sequence:
>2943_bases ATGTATTCGTGTTACAGCAAAGGAATATCCCATAACTATCTTCTACATCCTATGTCACGTTTGGATATTTTTGTTTTCGA TTCTCTGATCGCAAACCAGGATCAAAATCTTCTTGAGGAAATTTTCTGTTCTGAAGACACAGTTTTATTTAAAGCCTACC GTACTACGGCTCTACAATCCCCTCTAGCTGCTAAGAACCTAAATATCGCCCGTAAAGTCGCAAATTATATCTTAGCTGAC AATGGGGAAATCGATACAGTAAAGCTTGTCGAAGCCATTCACCATCTCTCACAATGTACCTATCCTTTAGGGCCTCATCG CCATAATGAAGCTCAAGATCGTGAACACCTCCTTAAAATGCTAAAAGCTCTAAAGGAAAATCCTAAATTAAAAGAAAGCA TCAAAACTCTCTTTGTCCCTTCATACTCTACAATCCAAAACCTAATTCGCCATACACTAGCATTGAATCCACAGACAATT CTCTCTACGATTCATGTGCGTCAAGCAGCACTCACAGCGCTCTTCACCTACCTTCGGCAAGATGTAGGTTCCTGTTTTGC TACGGCTCCTGCCATTCTCATTCACCAAGAATATCCAGAACGATTCCTTAAAGATCTCAATGATCTCATTAGCAGTGGCA AACTCTCTAGAATCGTAAACCAAAGGGAAATTGCGGTTCCTATAAACCTTTCGGGATGCATTGGAGAGCTATTCAAGCCT TTAAGGATTCTAGATCTTTATCCTGATCCTCTGGTTAAGCTCTCCTCATCTCCAGGACTCAAAAAAGCCTTTTCTGCTGC CAATCTTATTGAAACTCTTGGGGATTCTGAAGCACAAATCCAACAGTTGCTCTCGCATCAATATTTGATGCAAAAACTAC AAAATGTCCATGAGACCTTAACTGCTAACGACATTATCAAATCGACACTTCTGCACTACTATCAGCTCCAAGAAAGTACT GTACGAGCTATTTTCTTCAAAGAAGGGTTGTTCAGCAAAGAACAAGTGGCATTCTCGACGCAACACCCCAGAGAGCTCTC AGAAATACAACGGGTATACCACTACTTACATGCCTATGAAGAAGCAAAATCTGCTTTTATCCATGACACTCAAAATCCCT TACTGAAAGCCTGGGAGTATACTTTAGCGACTCTTGCGGATGCTAGCCAACCTACCATCTCAAACCATATCCGCCTTGCC TTAGGATGGAAAAGTGAAGACCCTCACAGTCTTGTATCTCTAGTTACACACTTTGTTGAAGAGGAAGTAGAAAACATCCG AATTTTAGTCCAACAATGTGAACAGACCTATCACGAAGCACGCTCCCAACTAGAATATATTGAAGGGCGGATGCGCAACC CACTAAATAATCAAGACAGTCAGATTTTGACGATGGATCACATGCGCTTCCGTCAAGAACTCAATAAAGCTCTTTATGAG TGGGATAGTGCTCAAGAAAAGGCAAAGAAATTTCTACATCTTCCTGAATTCTTACTTTCTTTCTATACAAAGCAAATTCC CTTATACTTTCGTAGTTCTTACGATGCCTTCATTCAAGAATTTGCTCATCTCTATGCTAATGCTCCCGCTGGCTTCCGTA TTCTTTTCACGCATGGACGCACCCATCCGAACACATGGTCCCCCATCTATTCGATTAATGAATTTATACGTTTTCTTTCT GAATTCTTCACCTCCACAGAGTCAGAACTTCTGGGGAAACATGCCGTGATCAATTTAGAGAAAGAAACATCTCGGCTCGT CCACAACATCACTGCCATGCTACACACGGATGTTTTCCAAGAAGCTCTCCTTACAAGAATTTTAGAAGCCTATCAGCTTC CTGTGCCTCCCTCCATCTTAAACCACTTAGATCAGCTGTCACAAACTCCCTGGGTTTATGTTTCTGGAGGAACAGTGGAC ACTCTTCTTTTGGATTATTTTGAAAGCTCAGAACCTCTGACACTTACAGAAAAGCATCCTGAAAATCCTCATGAGCTTGC AGCTTTCTACGCAGACGCCCTTAAAGATCTCCCTACAGGAATTAAAAGTTATCTAGAAGAAGGATCCCACTCTCTACTTA GCTCATCACCCACCCACGTTTTCTCTATAATCGCAGGATCTCCTTTATTTCGGGAAGCTTGGGATAATGATTGGTACAGC TATACCTGGCTTCGTGATGTCTGGGTGAAACAACACCAAGATTTCCTTCAAGATACTATATTACCTCAGCTAAGTATCTA TGCTTTCATAGAGAATTTTTGTAACAAATATGCTTTGCAACATGTAGTTCATGACTTTCATGATTTCTGCTCCGACCACT CCTTGACTCTTCCGGAGCTCTATGACAAAGGATCGCGTTTTCTAAGCTCCTTATTCACCAAAGATAAGACCGTAGCTCTT ATCTATATACGCCGTCTTCTCTACCTTATGGTCCGTGAAGTCCCTTATGTTTCAGAACAACAGCTTCCAGAAGTCTTAGA TAACGTCTCTTCATATCTCGGGATTTCCTCTCGTATTACCTATGAGAAATTCCGCTCCCTGATAGAGGAAACCATCCCTA AAATGACCTTACTCTCCTCAGCAGACCTGAGGCATATCTATAAAGGTCTCCTCATGCAAAGTTATCAAAAGATCTACACC GAAGAAGATACGTACCTCCGCCTCACCACGGCAATGAGGCATCATAATCTTGCCTATCCCGCTCCTTTGCTCTTTGCAGA CAGTAACTGGCCTTCTATTTATTTTGGATTCATCCTAAATCCAGGAACCACAGAGATCGATCTTTGGAAATTTAACTATG CAGGGCTGCAAGGACAGCCTCTTGACAATATCCAGGAGCTGTTCGCAACGTCAAGACCCTGGACCCTCTATGCAAATCCT ATAGATTATGGCATGCCACCGCCTCCAGGCTACCGCAGCCGCCTCCCTAAAGAATTTTTCTAG
Upstream 100 bases:
>100_bases CGAACATTCTGCAGATGGAACTCTGACCATCCTTTCATTTTCATAAACTTGCCTTCGGAGCTCTAGAAAAATAGTAGTGG AGGATATCAGTGACAGAAAC
Downstream 100 bases:
>100_bases ATTATTTTTTCTTTTTAAAAAGAGCTGAAAATAAACTTCTTAAAGAGAACTTTGAAATTTCACGTCCCACGGCCGAGATG CTCTCCGTAAGGGGAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 980; Mature: 980
Protein sequence:
>980_residues MYSCYSKGISHNYLLHPMSRLDIFVFDSLIANQDQNLLEEIFCSEDTVLFKAYRTTALQSPLAAKNLNIARKVANYILAD NGEIDTVKLVEAIHHLSQCTYPLGPHRHNEAQDREHLLKMLKALKENPKLKESIKTLFVPSYSTIQNLIRHTLALNPQTI LSTIHVRQAALTALFTYLRQDVGSCFATAPAILIHQEYPERFLKDLNDLISSGKLSRIVNQREIAVPINLSGCIGELFKP LRILDLYPDPLVKLSSSPGLKKAFSAANLIETLGDSEAQIQQLLSHQYLMQKLQNVHETLTANDIIKSTLLHYYQLQEST VRAIFFKEGLFSKEQVAFSTQHPRELSEIQRVYHYLHAYEEAKSAFIHDTQNPLLKAWEYTLATLADASQPTISNHIRLA LGWKSEDPHSLVSLVTHFVEEEVENIRILVQQCEQTYHEARSQLEYIEGRMRNPLNNQDSQILTMDHMRFRQELNKALYE WDSAQEKAKKFLHLPEFLLSFYTKQIPLYFRSSYDAFIQEFAHLYANAPAGFRILFTHGRTHPNTWSPIYSINEFIRFLS EFFTSTESELLGKHAVINLEKETSRLVHNITAMLHTDVFQEALLTRILEAYQLPVPPSILNHLDQLSQTPWVYVSGGTVD TLLLDYFESSEPLTLTEKHPENPHELAAFYADALKDLPTGIKSYLEEGSHSLLSSSPTHVFSIIAGSPLFREAWDNDWYS YTWLRDVWVKQHQDFLQDTILPQLSIYAFIENFCNKYALQHVVHDFHDFCSDHSLTLPELYDKGSRFLSSLFTKDKTVAL IYIRRLLYLMVREVPYVSEQQLPEVLDNVSSYLGISSRITYEKFRSLIEETIPKMTLLSSADLRHIYKGLLMQSYQKIYT EEDTYLRLTTAMRHHNLAYPAPLLFADSNWPSIYFGFILNPGTTEIDLWKFNYAGLQGQPLDNIQELFATSRPWTLYANP IDYGMPPPPGYRSRLPKEFF
Sequences:
>Translated_980_residues MYSCYSKGISHNYLLHPMSRLDIFVFDSLIANQDQNLLEEIFCSEDTVLFKAYRTTALQSPLAAKNLNIARKVANYILAD NGEIDTVKLVEAIHHLSQCTYPLGPHRHNEAQDREHLLKMLKALKENPKLKESIKTLFVPSYSTIQNLIRHTLALNPQTI LSTIHVRQAALTALFTYLRQDVGSCFATAPAILIHQEYPERFLKDLNDLISSGKLSRIVNQREIAVPINLSGCIGELFKP LRILDLYPDPLVKLSSSPGLKKAFSAANLIETLGDSEAQIQQLLSHQYLMQKLQNVHETLTANDIIKSTLLHYYQLQEST VRAIFFKEGLFSKEQVAFSTQHPRELSEIQRVYHYLHAYEEAKSAFIHDTQNPLLKAWEYTLATLADASQPTISNHIRLA LGWKSEDPHSLVSLVTHFVEEEVENIRILVQQCEQTYHEARSQLEYIEGRMRNPLNNQDSQILTMDHMRFRQELNKALYE WDSAQEKAKKFLHLPEFLLSFYTKQIPLYFRSSYDAFIQEFAHLYANAPAGFRILFTHGRTHPNTWSPIYSINEFIRFLS EFFTSTESELLGKHAVINLEKETSRLVHNITAMLHTDVFQEALLTRILEAYQLPVPPSILNHLDQLSQTPWVYVSGGTVD TLLLDYFESSEPLTLTEKHPENPHELAAFYADALKDLPTGIKSYLEEGSHSLLSSSPTHVFSIIAGSPLFREAWDNDWYS YTWLRDVWVKQHQDFLQDTILPQLSIYAFIENFCNKYALQHVVHDFHDFCSDHSLTLPELYDKGSRFLSSLFTKDKTVAL IYIRRLLYLMVREVPYVSEQQLPEVLDNVSSYLGISSRITYEKFRSLIEETIPKMTLLSSADLRHIYKGLLMQSYQKIYT EEDTYLRLTTAMRHHNLAYPAPLLFADSNWPSIYFGFILNPGTTEIDLWKFNYAGLQGQPLDNIQELFATSRPWTLYANP IDYGMPPPPGYRSRLPKEFF >Mature_980_residues MYSCYSKGISHNYLLHPMSRLDIFVFDSLIANQDQNLLEEIFCSEDTVLFKAYRTTALQSPLAAKNLNIARKVANYILAD NGEIDTVKLVEAIHHLSQCTYPLGPHRHNEAQDREHLLKMLKALKENPKLKESIKTLFVPSYSTIQNLIRHTLALNPQTI LSTIHVRQAALTALFTYLRQDVGSCFATAPAILIHQEYPERFLKDLNDLISSGKLSRIVNQREIAVPINLSGCIGELFKP LRILDLYPDPLVKLSSSPGLKKAFSAANLIETLGDSEAQIQQLLSHQYLMQKLQNVHETLTANDIIKSTLLHYYQLQEST VRAIFFKEGLFSKEQVAFSTQHPRELSEIQRVYHYLHAYEEAKSAFIHDTQNPLLKAWEYTLATLADASQPTISNHIRLA LGWKSEDPHSLVSLVTHFVEEEVENIRILVQQCEQTYHEARSQLEYIEGRMRNPLNNQDSQILTMDHMRFRQELNKALYE WDSAQEKAKKFLHLPEFLLSFYTKQIPLYFRSSYDAFIQEFAHLYANAPAGFRILFTHGRTHPNTWSPIYSINEFIRFLS EFFTSTESELLGKHAVINLEKETSRLVHNITAMLHTDVFQEALLTRILEAYQLPVPPSILNHLDQLSQTPWVYVSGGTVD TLLLDYFESSEPLTLTEKHPENPHELAAFYADALKDLPTGIKSYLEEGSHSLLSSSPTHVFSIIAGSPLFREAWDNDWYS YTWLRDVWVKQHQDFLQDTILPQLSIYAFIENFCNKYALQHVVHDFHDFCSDHSLTLPELYDKGSRFLSSLFTKDKTVAL IYIRRLLYLMVREVPYVSEQQLPEVLDNVSSYLGISSRITYEKFRSLIEETIPKMTLLSSADLRHIYKGLLMQSYQKIYT EEDTYLRLTTAMRHHNLAYPAPLLFADSNWPSIYFGFILNPGTTEIDLWKFNYAGLQGQPLDNIQELFATSRPWTLYANP IDYGMPPPPGYRSRLPKEFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 113102; Mature: 113102
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSCYSKGISHNYLLHPMSRLDIFVFDSLIANQDQNLLEEIFCSEDTVLFKAYRTTALQS CCCCHHCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC PLAAKNLNIARKVANYILADNGEIDTVKLVEAIHHLSQCTYPLGPHRHNEAQDREHLLKM CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LKALKENPKLKESIKTLFVPSYSTIQNLIRHTLALNPQTILSTIHVRQAALTALFTYLRQ HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DVGSCFATAPAILIHQEYPERFLKDLNDLISSGKLSRIVNQREIAVPINLSGCIGELFKP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHH LRILDLYPDPLVKLSSSPGLKKAFSAANLIETLGDSEAQIQQLLSHQYLMQKLQNVHETL HHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TANDIIKSTLLHYYQLQESTVRAIFFKEGLFSKEQVAFSTQHPRELSEIQRVYHYLHAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH EAKSAFIHDTQNPLLKAWEYTLATLADASQPTISNHIRLALGWKSEDPHSLVSLVTHFVE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH EEVENIRILVQQCEQTYHEARSQLEYIEGRMRNPLNNQDSQILTMDHMRFRQELNKALYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHH WDSAQEKAKKFLHLPEFLLSFYTKQIPLYFRSSYDAFIQEFAHLYANAPAGFRILFTHGR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCC THPNTWSPIYSINEFIRFLSEFFTSTESELLGKHAVINLEKETSRLVHNITAMLHTDVFQ CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHH EALLTRILEAYQLPVPPSILNHLDQLSQTPWVYVSGGTVDTLLLDYFESSEPLTLTEKHP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCC ENPHELAAFYADALKDLPTGIKSYLEEGSHSLLSSSPTHVFSIIAGSPLFREAWDNDWYS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHCCCCCEE YTWLRDVWVKQHQDFLQDTILPQLSIYAFIENFCNKYALQHVVHDFHDFCSDHSLTLPEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YDKGSRFLSSLFTKDKTVALIYIRRLLYLMVREVPYVSEQQLPEVLDNVSSYLGISSRIT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHCCC YEKFRSLIEETIPKMTLLSSADLRHIYKGLLMQSYQKIYTEEDTYLRLTTAMRHHNLAYP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCC APLLFADSNWPSIYFGFILNPGTTEIDLWKFNYAGLQGQPLDNIQELFATSRPWTLYANP CCEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECC IDYGMPPPPGYRSRLPKEFF CCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MYSCYSKGISHNYLLHPMSRLDIFVFDSLIANQDQNLLEEIFCSEDTVLFKAYRTTALQS CCCCHHCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCC PLAAKNLNIARKVANYILADNGEIDTVKLVEAIHHLSQCTYPLGPHRHNEAQDREHLLKM CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LKALKENPKLKESIKTLFVPSYSTIQNLIRHTLALNPQTILSTIHVRQAALTALFTYLRQ HHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH DVGSCFATAPAILIHQEYPERFLKDLNDLISSGKLSRIVNQREIAVPINLSGCIGELFKP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHH LRILDLYPDPLVKLSSSPGLKKAFSAANLIETLGDSEAQIQQLLSHQYLMQKLQNVHETL HHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TANDIIKSTLLHYYQLQESTVRAIFFKEGLFSKEQVAFSTQHPRELSEIQRVYHYLHAYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH EAKSAFIHDTQNPLLKAWEYTLATLADASQPTISNHIRLALGWKSEDPHSLVSLVTHFVE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH EEVENIRILVQQCEQTYHEARSQLEYIEGRMRNPLNNQDSQILTMDHMRFRQELNKALYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHH WDSAQEKAKKFLHLPEFLLSFYTKQIPLYFRSSYDAFIQEFAHLYANAPAGFRILFTHGR CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCC THPNTWSPIYSINEFIRFLSEFFTSTESELLGKHAVINLEKETSRLVHNITAMLHTDVFQ CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHH EALLTRILEAYQLPVPPSILNHLDQLSQTPWVYVSGGTVDTLLLDYFESSEPLTLTEKHP HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEECCCCC ENPHELAAFYADALKDLPTGIKSYLEEGSHSLLSSSPTHVFSIIAGSPLFREAWDNDWYS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCHHHHHCCCCCEE YTWLRDVWVKQHQDFLQDTILPQLSIYAFIENFCNKYALQHVVHDFHDFCSDHSLTLPEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH YDKGSRFLSSLFTKDKTVALIYIRRLLYLMVREVPYVSEQQLPEVLDNVSSYLGISSRIT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHCCC YEKFRSLIEETIPKMTLLSSADLRHIYKGLLMQSYQKIYTEEDTYLRLTTAMRHHNLAYP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCC APLLFADSNWPSIYFGFILNPGTTEIDLWKFNYAGLQGQPLDNIQELFATSRPWTLYANP CCEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECC IDYGMPPPPGYRSRLPKEFF CCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA