| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836288
GI number: 15836288
Start: 850918
End: 852123
Strand: Direct
Name: Not Available
Synonym: CPj0755
Alternate gene names: NA
Gene position: 850918-852123 (Clockwise)
Preceding gene: 15836285
Following gene: 15836289
Centisome position: 69.37
GC content: 37.23
Gene sequence:
>1206_bases ATGTTATTGGTAAGGAAATGGTTGCATACTTGTTTCAAATATTGGATTTACTTTCTTCCGGTGGTAACGCTACTTCTTCC CCTAGTGTGTTACCCTTTTCTGTCGATTAGTCAAAAAATTTATGGATACTTTGTTTTTACTACAATTTCTTCTTTAGGCT GGTTTTTTGCATTGAGACGTAGGGAAAATCAATTAAAAACAGCAGCTGTTCAGCTTCTTCAAACAAAAATTAGAAAATTA ACAGAAAATAATGAAGGGTTAAGACAAATTCGAGAATCTCTTAAAGAACATCAGCAAGAGAGTGCTCAACTGCAAATTCA AAGTCAGAAGCTTAAAAATAGCCTATTTCATCTTCAGGGTTTACTTGTGAAAACTAAGGGAGAGGGGCAAAAATTAGAAA CTTTGTTACTTCATAGAACAGAAGAGAATCGATGTTTGAAAATGCAAGTAGATTCTTTAATTCAGGAATGCGGAGAAAAA ACAGAGGAAGTACAAACTTTAAATCGAGAGTTGGCTGAGACTTTAGCCTACCAGCAAGCTTTAAATGACGAGTATCAAGC GACCTTCTCTGAGCAACGCAATATGCTGGATAAGCGGCAGATCTACATTGGAAAGCTGGAAAACAAGGTTCAGGATTTAA TGTATGAGATCCGTAACTTGCTTCAGTTAGAGTCAGACATAGCAGAGAATATTCCTTCTCAAGAATCGAATGCTGTTACG GGAAATATTTCTTTACAATTGTCTAGTGAGTTAAAAAAAATTGCTTTTAAGGCTGAAAACATAGAGGCAGCCTCTTCTTT AACAGCATCACGTTACCTTCATACAGATACGAGTGTGCATAACTACTCTTTAGAGTGTCGCCAGTTATTTGATAGCTTAA GAGAAGAAAATCTCGGGATGCTTTTTGTCTACGCTCGTCAATCCCAACGTGCGGTTTTTGCTAATGCGTTATTTAAAACG TGGACGGGGTATTGTGCAGAAGATTTTTTAAAATTTGGTAGTGACATAGTGATTTCTGGGGGCAAACAGTGGATGGAGGA TCTTCATTCCTCTAGAGAAGAATGCTCTGGTAGATTAGTGATTAAAACGAAATCACGAGGTCATCTTCCTTTCCGTTATT GTTTAATGGCTTTGAATAAAGGCCCTCTTTGCTATCATGTTTTGGGGGTTCTTTATCCTCTCCATAAAGAAGTGCTTCAG AGTTGA
Upstream 100 bases:
>100_bases ATAAGAATGGTCTTAAAAAAATACTTTTCTAATCAAATAGAACTTATGGCTATGAAGAGCAATTTATTCTTATTTTTGTT GATATAAGGATTTATTTTTT
Downstream 100 bases:
>100_bases TACTATTTCTTCTTCTATGAGGAAAGTTGTATCAAATTGTTGGTAAGATATTGATTTTCGTCAGCGTATAAGATAAAAAT CCCTAGATTTCCTATCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MLLVRKWLHTCFKYWIYFLPVVTLLLPLVCYPFLSISQKIYGYFVFTTISSLGWFFALRRRENQLKTAAVQLLQTKIRKL TENNEGLRQIRESLKEHQQESAQLQIQSQKLKNSLFHLQGLLVKTKGEGQKLETLLLHRTEENRCLKMQVDSLIQECGEK TEEVQTLNRELAETLAYQQALNDEYQATFSEQRNMLDKRQIYIGKLENKVQDLMYEIRNLLQLESDIAENIPSQESNAVT GNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNYSLECRQLFDSLREENLGMLFVYARQSQRAVFANALFKT WTGYCAEDFLKFGSDIVISGGKQWMEDLHSSREECSGRLVIKTKSRGHLPFRYCLMALNKGPLCYHVLGVLYPLHKEVLQ S
Sequences:
>Translated_401_residues MLLVRKWLHTCFKYWIYFLPVVTLLLPLVCYPFLSISQKIYGYFVFTTISSLGWFFALRRRENQLKTAAVQLLQTKIRKL TENNEGLRQIRESLKEHQQESAQLQIQSQKLKNSLFHLQGLLVKTKGEGQKLETLLLHRTEENRCLKMQVDSLIQECGEK TEEVQTLNRELAETLAYQQALNDEYQATFSEQRNMLDKRQIYIGKLENKVQDLMYEIRNLLQLESDIAENIPSQESNAVT GNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNYSLECRQLFDSLREENLGMLFVYARQSQRAVFANALFKT WTGYCAEDFLKFGSDIVISGGKQWMEDLHSSREECSGRLVIKTKSRGHLPFRYCLMALNKGPLCYHVLGVLYPLHKEVLQ S >Mature_401_residues MLLVRKWLHTCFKYWIYFLPVVTLLLPLVCYPFLSISQKIYGYFVFTTISSLGWFFALRRRENQLKTAAVQLLQTKIRKL TENNEGLRQIRESLKEHQQESAQLQIQSQKLKNSLFHLQGLLVKTKGEGQKLETLLLHRTEENRCLKMQVDSLIQECGEK TEEVQTLNRELAETLAYQQALNDEYQATFSEQRNMLDKRQIYIGKLENKVQDLMYEIRNLLQLESDIAENIPSQESNAVT GNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNYSLECRQLFDSLREENLGMLFVYARQSQRAVFANALFKT WTGYCAEDFLKFGSDIVISGGKQWMEDLHSSREECSGRLVIKTKSRGHLPFRYCLMALNKGPLCYHVLGVLYPLHKEVLQ S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0242 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y755_CHLPN (Q9Z7F1)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: A86585 - PIR: D72039 - RefSeq: NP_224950.1 - RefSeq: NP_300812.1 - RefSeq: NP_445654.1 - RefSeq: NP_877055.1 - ProteinModelPortal: Q9Z7F1 - GeneID: 1467462 - GeneID: 894906 - GeneID: 919526 - GeneID: 963606 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP1117 - KEGG: cpj:CPj0755 - KEGG: cpn:CPn0755 - KEGG: cpt:CpB0783 - TIGR: CP_1117 - HOGENOM: HBG414143 - OMA: EQHNMLD - ProtClustDB: CLSK871489 - BioCyc: CPNE115711:CP_1117-MONOMER - BioCyc: CPNE115713:CPN0755-MONOMER - BioCyc: CPNE138677:CPJ0755-MONOMER - BioCyc: CPNE182082:CPB0783-MONOMER - InterPro: IPR009623
Pfam domain/function: PF06785 UPF0242
EC number: NA
Molecular weight: Translated: 46487; Mature: 46487
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVRKWLHTCFKYWIYFLPVVTLLLPLVCYPFLSISQKIYGYFVFTTISSLGWFFALRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RENQLKTAAVQLLQTKIRKLTENNEGLRQIRESLKEHQQESAQLQIQSQKLKNSLFHLQG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVKTKGEGQKLETLLLHRTEENRCLKMQVDSLIQECGEKTEEVQTLNRELAETLAYQQA HEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDEYQATFSEQRNMLDKRQIYIGKLENKVQDLMYEIRNLLQLESDIAENIPSQESNAVT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE GNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNYSLECRQLFDSLREENLGM EEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCE LFVYARQSQRAVFANALFKTWTGYCAEDFLKFGSDIVISGGKQWMEDLHSSREECSGRLV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHCCCEEE IKTKSRGHLPFRYCLMALNKGPLCYHVLGVLYPLHKEVLQS EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLVRKWLHTCFKYWIYFLPVVTLLLPLVCYPFLSISQKIYGYFVFTTISSLGWFFALRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RENQLKTAAVQLLQTKIRKLTENNEGLRQIRESLKEHQQESAQLQIQSQKLKNSLFHLQG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVKTKGEGQKLETLLLHRTEENRCLKMQVDSLIQECGEKTEEVQTLNRELAETLAYQQA HEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNDEYQATFSEQRNMLDKRQIYIGKLENKVQDLMYEIRNLLQLESDIAENIPSQESNAVT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE GNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNYSLECRQLFDSLREENLGM EEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCE LFVYARQSQRAVFANALFKTWTGYCAEDFLKFGSDIVISGGKQWMEDLHSSREECSGRLV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHCCCEEE IKTKSRGHLPFRYCLMALNKGPLCYHVLGVLYPLHKEVLQS EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362