| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836120
GI number: 15836120
Start: 677405
End: 677950
Strand: Direct
Name: Not Available
Synonym: CPj0588
Alternate gene names: NA
Gene position: 677405-677950 (Clockwise)
Preceding gene: 15836119
Following gene: 15836121
Centisome position: 55.23
GC content: 43.59
Gene sequence:
>546_bases ATGTCCTTATTGAACCTTCCCTCAAGCCAGGATTCTGCATCTGAGGACTCCACATCGCAATCTCAAATCTTCGATCCCAT TAGAAATCGGGAGTTAGTTTCTACTCCCGAAGAAAAAGTCCGCCAAAGGTTGCTCTCCTTCCTAATGCATAAGCTGAACT ACCCTAAGAAACTCATCATCATAGAAAAAGAACTCAAAACTCTTTTTCCTCTGCTTATGCGTAAAGGAACCCTAATCCCA AAACGCCGCCCAGATATTCTCATCATCACTCCCCCCACATACACAGACGCACAGGGAAACACTCACAACCTAGGCGACCC AAAACCCCTGCTACTTATCGAATGTAAGGCCTTAGCCGTAAACCAAAATGCACTCAAACAACTCCTTAGCTATAACTACT CTATCGGAGCCACCTGCATTGCTATGGCAGGGAAACACTCTCAAGTGTCAGCTCTCTTCAATCCAAAAACACAAACTCTT GATTTTTATCCTGGCCTCCCAGAGTATTCCCAACTCCTAAACTACTTTATTTCTTTAAACTTATAG
Upstream 100 bases:
>100_bases GCTATCCGCCAGCTAGAGTCTGCCGCAGAAAACTTCCTGATCTTCTTGAACGAGCAAGAGCATAAAATCCAATGCATTTA TAAAAAACATGACGGCAACT
Downstream 100 bases:
>100_bases CTAATCATCCATGCAGATCTGTGTTACCGGCGTTGTACTTCGCAGCCGCCCCTTAGGAAAAAATCATACACTCACCACTT TATTTACCCCTGAAGGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSLLNLPSSQDSASEDSTSQSQIFDPIRNRELVSTPEEKVRQRLLSFLMHKLNYPKKLIIIEKELKTLFPLLMRKGTLIP KRRPDILIITPPTYTDAQGNTHNLGDPKPLLLIECKALAVNQNALKQLLSYNYSIGATCIAMAGKHSQVSALFNPKTQTL DFYPGLPEYSQLLNYFISLNL
Sequences:
>Translated_181_residues MSLLNLPSSQDSASEDSTSQSQIFDPIRNRELVSTPEEKVRQRLLSFLMHKLNYPKKLIIIEKELKTLFPLLMRKGTLIP KRRPDILIITPPTYTDAQGNTHNLGDPKPLLLIECKALAVNQNALKQLLSYNYSIGATCIAMAGKHSQVSALFNPKTQTL DFYPGLPEYSQLLNYFISLNL >Mature_180_residues SLLNLPSSQDSASEDSTSQSQIFDPIRNRELVSTPEEKVRQRLLSFLMHKLNYPKKLIIIEKELKTLFPLLMRKGTLIPK RRPDILIITPPTYTDAQGNTHNLGDPKPLLLIECKALAVNQNALKQLLSYNYSIGATCIAMAGKHSQVSALFNPKTQTLD FYPGLPEYSQLLNYFISLNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20430; Mature: 20299
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLNLPSSQDSASEDSTSQSQIFDPIRNRELVSTPEEKVRQRLLSFLMHKLNYPKKLII CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE IEKELKTLFPLLMRKGTLIPKRRPDILIITPPTYTDAQGNTHNLGDPKPLLLIECKALAV EHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHHEE NQNALKQLLSYNYSIGATCIAMAGKHSQVSALFNPKTQTLDFYPGLPEYSQLLNYFISLN CHHHHHHHHHCCCCCCHHHHHHCCCCCHHHEEECCCCCEEECCCCCHHHHHHHHHHHHCC L C >Mature Secondary Structure SLLNLPSSQDSASEDSTSQSQIFDPIRNRELVSTPEEKVRQRLLSFLMHKLNYPKKLII CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE IEKELKTLFPLLMRKGTLIPKRRPDILIITPPTYTDAQGNTHNLGDPKPLLLIECKALAV EHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEHHEE NQNALKQLLSYNYSIGATCIAMAGKHSQVSALFNPKTQTLDFYPGLPEYSQLLNYFISLN CHHHHHHHHHCCCCCCHHHHHHCCCCCHHHEEECCCCCEEECCCCCHHHHHHHHHHHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA