Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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The map label for this gene is yvyD

Identifier: 15836119

GI number: 15836119

Start: 676762

End: 677448

Strand: Direct

Name: yvyD

Synonym: CPj0587

Alternate gene names: NA

Gene position: 676762-677448 (Clockwise)

Preceding gene: 15836118

Following gene: 15836120

Centisome position: 55.18

GC content: 43.38

Gene sequence:

>687_bases
ATGAGACCTCATCGTAAACACGTATCATCTAAAAGCTTAGCTTTAAAGCAATCTGCATCAACTCATGTAGAGATCACAAC
AAAAGCCTTTCGTCTCTCTATGCCTCTAAAACAGCTGATCCTAGAGAAAAGCGACCACCTCCCCCCTATGGAAACAATCC
GTGTGGTGCTAACCTCTCATAAAGATAAGCTAGGCACCGAGGTGCATGTTGTAGCTTCTCATGGCAAAGAAATCCTTCAA
ACTAAGGTTCATAACGCAAACCCATACACTGCAGTGATCAATGCTTTTAAGAAAATCCGCACCATGGCAAATAAGCACTC
CAATAAACGTAAAGACAGGACAAAACATGATCTAGGTCTTGCAGCAAAAGAAGAACGTATCGCAATACAGGAAGAACAAG
AAGATCGCCTTAGCAACGAGTGGCTTCCTGTCGAAGGCCTCGATGCCTGGGATTCTCTAAAAACTCTTGGGTATGTTCCC
GCATCAGCGAAAAAGAAGATCTCCAAGAAAAAGATGAGCATTCGTATGCTATCTCAAGACGAGGCTATCCGCCAGCTAGA
GTCTGCCGCAGAAAACTTCCTGATCTTCTTGAACGAGCAAGAGCATAAAATCCAATGCATTTATAAAAAACATGACGGCA
ACTATGTCCTTATTGAACCTTCCCTCAAGCCAGGATTCTGCATCTGA

Upstream 100 bases:

>100_bases
AATTCTTTTTTTGAATAGGTATTTCTCCTTATAATAGAGCTATGGAGAACTATTTATTTTATCTACTCTCCTAAAGCATC
ACGTAACCCTAGGAGACAAG

Downstream 100 bases:

>100_bases
GGACTCCACATCGCAATCTCAAATCTTCGATCCCATTAGAAATCGGGAGTTAGTTTCTACTCCCGAAGAAAAAGTCCGCC
AAAGGTTGCTCTCCTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRPHRKHVSSKSLALKQSASTHVEITTKAFRLSMPLKQLILEKSDHLPPMETIRVVLTSHKDKLGTEVHVVASHGKEILQ
TKVHNANPYTAVINAFKKIRTMANKHSNKRKDRTKHDLGLAAKEERIAIQEEQEDRLSNEWLPVEGLDAWDSLKTLGYVP
ASAKKKISKKKMSIRMLSQDEAIRQLESAAENFLIFLNEQEHKIQCIYKKHDGNYVLIEPSLKPGFCI

Sequences:

>Translated_228_residues
MRPHRKHVSSKSLALKQSASTHVEITTKAFRLSMPLKQLILEKSDHLPPMETIRVVLTSHKDKLGTEVHVVASHGKEILQ
TKVHNANPYTAVINAFKKIRTMANKHSNKRKDRTKHDLGLAAKEERIAIQEEQEDRLSNEWLPVEGLDAWDSLKTLGYVP
ASAKKKISKKKMSIRMLSQDEAIRQLESAAENFLIFLNEQEHKIQCIYKKHDGNYVLIEPSLKPGFCI
>Mature_228_residues
MRPHRKHVSSKSLALKQSASTHVEITTKAFRLSMPLKQLILEKSDHLPPMETIRVVLTSHKDKLGTEVHVVASHGKEILQ
TKVHNANPYTAVINAFKKIRTMANKHSNKRKDRTKHDLGLAAKEERIAIQEEQEDRLSNEWLPVEGLDAWDSLKTLGYVP
ASAKKKISKKKMSIRMLSQDEAIRQLESAAENFLIFLNEQEHKIQCIYKKHDGNYVLIEPSLKPGFCI

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26030; Mature: 26030

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPHRKHVSSKSLALKQSASTHVEITTKAFRLSMPLKQLILEKSDHLPPMETIRVVLTSH
CCCCHHHCCCHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHC
KDKLGTEVHVVASHGKEILQTKVHNANPYTAVINAFKKIRTMANKHSNKRKDRTKHDLGL
CHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
AAKEERIAIQEEQEDRLSNEWLPVEGLDAWDSLKTLGYVPASAKKKISKKKMSIRMLSQD
CCCHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EAIRQLESAAENFLIFLNEQEHKIQCIYKKHDGNYVLIEPSLKPGFCI
HHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MRPHRKHVSSKSLALKQSASTHVEITTKAFRLSMPLKQLILEKSDHLPPMETIRVVLTSH
CCCCHHHCCCHHHHHHCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHC
KDKLGTEVHVVASHGKEILQTKVHNANPYTAVINAFKKIRTMANKHSNKRKDRTKHDLGL
CHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
AAKEERIAIQEEQEDRLSNEWLPVEGLDAWDSLKTLGYVPASAKKKISKKKMSIRMLSQD
CCCHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EAIRQLESAAENFLIFLNEQEHKIQCIYKKHDGNYVLIEPSLKPGFCI
HHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA