Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836003

GI number: 15836003

Start: 544897

End: 547224

Strand: Reverse

Name: Not Available

Synonym: CPj0472

Alternate gene names: NA

Gene position: 547224-544897 (Counterclockwise)

Preceding gene: 15836004

Following gene: 15835996

Centisome position: 44.61

GC content: 46.61

Gene sequence:

>2328_bases
ATGGCATCAGGAATCGGAGGATCTAGTGGATTAGGAAAGATTCCACCTAAAGATAATGGGGATAGAAGTCGATCGCCCTC
TCCTAAGGGAGAACTTGGCAGCCACGAGATTTCCCTGCCTCCTCAAGAACATGGAGAGGAAGGAGCTTCAGGATCTTCGC
ATATACATAGCAGTTCCTCTTTTCTACCAGAAGATCAGGAGTCTCAGAGCTCTTCTTCGGCAGCTTCTAGCCCGGGATTT
TTTTCTCGCGTACGTTCTGGGGTAGACAGGGCCTTAAAATCATTTGGCAACTTTTTTTCCGCAGAGTCTACGAGTCAAGC
GCGTGAAACGCGACAAGCTTTTGTTAGATTATCAAAAACCATCACCGCGGATGAGAGACGGGATGTCGATTCATCAAGTG
CTGCTGCTACAGAAGCCCGAGTGGCAGAGGACGCGAGTGTTTCAGGCGAAAATCCTTCTCAGGGGGTTCCAGAAACCTCT
TCTGGACCAGAACCTCAGCGTTTATTTTCTCTTCCTTCAGTAAAAAAACAGAGCGGTTTGGGTCGGTTGGTACAGACAGT
TCGCGATCGCATAGTACTTCCTAGTGGGGCTCCACCTACAGACAGCGAGCCTTTAAGTCTCTACGAGCTAAACCTCCGTT
TGAGTAGTTTACGTCAGGAGCTCTCTGACATACAAAGTAATGATCAGTTGACTCCAGAGGAAAAAGCAGAAGCCACAGTT
ACCATACAACAGCTGATCCAAATTACAGAATTCCAATGCGGCTATATGGAGGCAACACAATCTTCGGTATCTCTAGCAGA
AGCTCGTTTTAAGGGGGTAGAAACTAGTGATGAGATCAATTCCCTCTGTTCAGAACTGACAGATCCTGAGCTTCAAGAAC
TCATGAGTGATGGAGACTCTCTTCAAAACCTATTAGATGAGACTGCCGACGATTTAGAAGCTGCTTTGTCCCATGCTCGA
TTGAGTTTTTCTTTAGACGATAATCCAACTCCGATAGACAATAATCCAACTCTGATTTCTCAAGAAGAGCCTATTTATGA
GGAAATCGGAGGAGCTGCAGATCCTCAAAGAACTCGGGAAAACTGGTCTACAAGATTATGGAATCAGATTCGCGAGGCTC
TGGTTTCTCTTTTAGGAATGATTTTAAGCATTCTAGGGTCCATCTTGCACAGGTTGCGTATTGCTCGTCATGCAGCTGCT
GAAGCAGTGGGTCGTTGTTGCACGTGCCGAGGAGAAGAGTGTACTTCTTCTGAAGAGGACTCGATGTCGGTGGGGTCTCC
TTCAGAAATTGATGAAACTGAAAGAACGGGCTCTCCGCATGACGTTCCACGCAGAAATGGAAGTCCACGTGAAGATTCTC
CATTGATGAATGCCTTAGTAGGATGGGCACATAAGCACGGTGCTAAAACCAAGGAGAGTTCAGAATCAAGTACCCCGGAA
ATTTCGATTTCTGCTCCCATAGTGAGAGGTTGGAGTCAAGACAGTTCCGTCAGTTTTATTGTTATGGAAGATGATCATAT
TTTCTATGATGTTCCTCGTAGAAAAGATGGAATCTATGACGTTCCTAGTTCCCCTAGATGGAGTCCTGCGCGAGAGTTGG
AAGAGGATGTTTTTGGAGATTATGAAGTTCCTATAACCTCTGCTGAACCATCTAAAGACAAGAACATCTACATGACACCT
AGATTAGCAACTCCTGCTATCTATGATCTTCCTTCACGTCCAGGATCGTCTGGAAGCTCACGTTCTCCGTCTTCAGATCG
CGTACGAAGCAGCTCACCAAATAGACGGGGTGTGCCTCTTCCTCCAGTTCCTTCACCTGCTATGAGTGAGGAGGGGAGCA
TTTATGAGGATATGAGCGGTGCTTCAGGTGCAGGTGAAAGTGATTATGAAGATATGAGCCGTTCCCCCTCTCCTAGAGGC
GACTTGGATGAACCCATATATGCTAATACTCCTGAAGATAATCCATTTACTCAGAGAAATATAGATAGAATTTTACAGGA
GAGGTCAGGCGGTGCTTCCGCTTCTCCTGTAGAGCCTATTTATGATGAGATCCCATGGATTCATGGCAGGCCCCCTGCTA
CACTTCCAAGACCCGAGAATACATTGACTAATGTTTCGCTTAGAGTGAGCCCAGGGTTTGGACCAGAAGTAAGAGCCGCT
TTGCTTAGCGAGAGCGTGAGTGCTGTTATGGTCGAAGCAGAGAGTATTGTTCCTCCAACAGAGCCGGGGGACGGAGAATC
AGAATATCTAGAGCCCTTAGGGGGACTTGTAGCTACAACGAAAATCTTACTACAAAAAGGATGGCCTCGTGGAGAGTCGA
ATGCTTAG

Upstream 100 bases:

>100_bases
CAATATGTTGATTATTTTAATATATTTAAAAGCATTTTTGTTGTTTTTTAATAAAATTAAATTGTTTCAGAAAAAAGATT
ATTCTTTTTAGGAAGTGTTT

Downstream 100 bases:

>100_bases
GATTTAAGTAGTTCTTTCGAATCTCTAGTGAGGATGTATCGGGTTCTTAATTTTTATGGGGGAAACGTATCTGTGGATTT
CCCTTAGCTTCTCCCATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 775; Mature: 774

Protein sequence:

>775_residues
MASGIGGSSGLGKIPPKDNGDRSRSPSPKGELGSHEISLPPQEHGEEGASGSSHIHSSSSFLPEDQESQSSSSAASSPGF
FSRVRSGVDRALKSFGNFFSAESTSQARETRQAFVRLSKTITADERRDVDSSSAAATEARVAEDASVSGENPSQGVPETS
SGPEPQRLFSLPSVKKQSGLGRLVQTVRDRIVLPSGAPPTDSEPLSLYELNLRLSSLRQELSDIQSNDQLTPEEKAEATV
TIQQLIQITEFQCGYMEATQSSVSLAEARFKGVETSDEINSLCSELTDPELQELMSDGDSLQNLLDETADDLEAALSHAR
LSFSLDDNPTPIDNNPTLISQEEPIYEEIGGAADPQRTRENWSTRLWNQIREALVSLLGMILSILGSILHRLRIARHAAA
EAVGRCCTCRGEECTSSEEDSMSVGSPSEIDETERTGSPHDVPRRNGSPREDSPLMNALVGWAHKHGAKTKESSESSTPE
ISISAPIVRGWSQDSSVSFIVMEDDHIFYDVPRRKDGIYDVPSSPRWSPARELEEDVFGDYEVPITSAEPSKDKNIYMTP
RLATPAIYDLPSRPGSSGSSRSPSSDRVRSSSPNRRGVPLPPVPSPAMSEEGSIYEDMSGASGAGESDYEDMSRSPSPRG
DLDEPIYANTPEDNPFTQRNIDRILQERSGGASASPVEPIYDEIPWIHGRPPATLPRPENTLTNVSLRVSPGFGPEVRAA
LLSESVSAVMVEAESIVPPTEPGDGESEYLEPLGGLVATTKILLQKGWPRGESNA

Sequences:

>Translated_775_residues
MASGIGGSSGLGKIPPKDNGDRSRSPSPKGELGSHEISLPPQEHGEEGASGSSHIHSSSSFLPEDQESQSSSSAASSPGF
FSRVRSGVDRALKSFGNFFSAESTSQARETRQAFVRLSKTITADERRDVDSSSAAATEARVAEDASVSGENPSQGVPETS
SGPEPQRLFSLPSVKKQSGLGRLVQTVRDRIVLPSGAPPTDSEPLSLYELNLRLSSLRQELSDIQSNDQLTPEEKAEATV
TIQQLIQITEFQCGYMEATQSSVSLAEARFKGVETSDEINSLCSELTDPELQELMSDGDSLQNLLDETADDLEAALSHAR
LSFSLDDNPTPIDNNPTLISQEEPIYEEIGGAADPQRTRENWSTRLWNQIREALVSLLGMILSILGSILHRLRIARHAAA
EAVGRCCTCRGEECTSSEEDSMSVGSPSEIDETERTGSPHDVPRRNGSPREDSPLMNALVGWAHKHGAKTKESSESSTPE
ISISAPIVRGWSQDSSVSFIVMEDDHIFYDVPRRKDGIYDVPSSPRWSPARELEEDVFGDYEVPITSAEPSKDKNIYMTP
RLATPAIYDLPSRPGSSGSSRSPSSDRVRSSSPNRRGVPLPPVPSPAMSEEGSIYEDMSGASGAGESDYEDMSRSPSPRG
DLDEPIYANTPEDNPFTQRNIDRILQERSGGASASPVEPIYDEIPWIHGRPPATLPRPENTLTNVSLRVSPGFGPEVRAA
LLSESVSAVMVEAESIVPPTEPGDGESEYLEPLGGLVATTKILLQKGWPRGESNA
>Mature_774_residues
ASGIGGSSGLGKIPPKDNGDRSRSPSPKGELGSHEISLPPQEHGEEGASGSSHIHSSSSFLPEDQESQSSSSAASSPGFF
SRVRSGVDRALKSFGNFFSAESTSQARETRQAFVRLSKTITADERRDVDSSSAAATEARVAEDASVSGENPSQGVPETSS
GPEPQRLFSLPSVKKQSGLGRLVQTVRDRIVLPSGAPPTDSEPLSLYELNLRLSSLRQELSDIQSNDQLTPEEKAEATVT
IQQLIQITEFQCGYMEATQSSVSLAEARFKGVETSDEINSLCSELTDPELQELMSDGDSLQNLLDETADDLEAALSHARL
SFSLDDNPTPIDNNPTLISQEEPIYEEIGGAADPQRTRENWSTRLWNQIREALVSLLGMILSILGSILHRLRIARHAAAE
AVGRCCTCRGEECTSSEEDSMSVGSPSEIDETERTGSPHDVPRRNGSPREDSPLMNALVGWAHKHGAKTKESSESSTPEI
SISAPIVRGWSQDSSVSFIVMEDDHIFYDVPRRKDGIYDVPSSPRWSPARELEEDVFGDYEVPITSAEPSKDKNIYMTPR
LATPAIYDLPSRPGSSGSSRSPSSDRVRSSSPNRRGVPLPPVPSPAMSEEGSIYEDMSGASGAGESDYEDMSRSPSPRGD
LDEPIYANTPEDNPFTQRNIDRILQERSGGASASPVEPIYDEIPWIHGRPPATLPRPENTLTNVSLRVSPGFGPEVRAAL
LSESVSAVMVEAESIVPPTEPGDGESEYLEPLGGLVATTKILLQKGWPRGESNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83597; Mature: 83466

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGIGGSSGLGKIPPKDNGDRSRSPSPKGELGSHEISLPPQEHGEEGASGSSHIHSSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
FLPEDQESQSSSSAASSPGFFSRVRSGVDRALKSFGNFFSAESTSQARETRQAFVRLSKT
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITADERRDVDSSSAAATEARVAEDASVSGENPSQGVPETSSGPEPQRLFSLPSVKKQSGL
HCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
GRLVQTVRDRIVLPSGAPPTDSEPLSLYELNLRLSSLRQELSDIQSNDQLTPEEKAEATV
HHHHHHHHHCEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TIQQLIQITEFQCGYMEATQSSVSLAEARFKGVETSDEINSLCSELTDPELQELMSDGDS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCHH
LQNLLDETADDLEAALSHARLSFSLDDNPTPIDNNPTLISQEEPIYEEIGGAADPQRTRE
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEECCCCCHHHHHCCCCCHHHHHH
NWSTRLWNQIREALVSLLGMILSILGSILHRLRIARHAAAEAVGRCCTCRGEECTSSEED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SMSVGSPSEIDETERTGSPHDVPRRNGSPREDSPLMNALVGWAHKHGAKTKESSESSTPE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
ISISAPIVRGWSQDSSVSFIVMEDDHIFYDVPRRKDGIYDVPSSPRWSPARELEEDVFGD
EEECCCHHCCCCCCCCEEEEEEECCEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHCCC
YEVPITSAEPSKDKNIYMTPRLATPAIYDLPSRPGSSGSSRSPSSDRVRSSSPNRRGVPL
CCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PPVPSPAMSEEGSIYEDMSGASGAGESDYEDMSRSPSPRGDLDEPIYANTPEDNPFTQRN
CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
IDRILQERSGGASASPVEPIYDEIPWIHGRPPATLPRPENTLTNVSLRVSPGFGPEVRAA
HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
LLSESVSAVMVEAESIVPPTEPGDGESEYLEPLGGLVATTKILLQKGWPRGESNA
HHHHHHHHHEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASGIGGSSGLGKIPPKDNGDRSRSPSPKGELGSHEISLPPQEHGEEGASGSSHIHSSSS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
FLPEDQESQSSSSAASSPGFFSRVRSGVDRALKSFGNFFSAESTSQARETRQAFVRLSKT
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ITADERRDVDSSSAAATEARVAEDASVSGENPSQGVPETSSGPEPQRLFSLPSVKKQSGL
HCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHH
GRLVQTVRDRIVLPSGAPPTDSEPLSLYELNLRLSSLRQELSDIQSNDQLTPEEKAEATV
HHHHHHHHHCEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TIQQLIQITEFQCGYMEATQSSVSLAEARFKGVETSDEINSLCSELTDPELQELMSDGDS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCHH
LQNLLDETADDLEAALSHARLSFSLDDNPTPIDNNPTLISQEEPIYEEIGGAADPQRTRE
HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEECCCCCHHHHHCCCCCHHHHHH
NWSTRLWNQIREALVSLLGMILSILGSILHRLRIARHAAAEAVGRCCTCRGEECTSSEED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SMSVGSPSEIDETERTGSPHDVPRRNGSPREDSPLMNALVGWAHKHGAKTKESSESSTPE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
ISISAPIVRGWSQDSSVSFIVMEDDHIFYDVPRRKDGIYDVPSSPRWSPARELEEDVFGD
EEECCCHHCCCCCCCCEEEEEEECCEEEEECCCCCCCCEECCCCCCCCHHHHHHHHHCCC
YEVPITSAEPSKDKNIYMTPRLATPAIYDLPSRPGSSGSSRSPSSDRVRSSSPNRRGVPL
CCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PPVPSPAMSEEGSIYEDMSGASGAGESDYEDMSRSPSPRGDLDEPIYANTPEDNPFTQRN
CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
IDRILQERSGGASASPVEPIYDEIPWIHGRPPATLPRPENTLTNVSLRVSPGFGPEVRAA
HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
LLSESVSAVMVEAESIVPPTEPGDGESEYLEPLGGLVATTKILLQKGWPRGESNA
HHHHHHHHHEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA