Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835987

GI number: 15835987

Start: 518773

End: 520851

Strand: Reverse

Name: Not Available

Synonym: CPj0456

Alternate gene names: NA

Gene position: 520851-518773 (Counterclockwise)

Preceding gene: 15835988

Following gene: 15835982

Centisome position: 42.46

GC content: 43.72

Gene sequence:

>2079_bases
ATGACTCATTGCTTACATGGTTGGTTTTCTGTAGTTCGTCATCACTTTGTGCAGGCGTTTAATTTCTCACGTCCTTTATA
TTCTCGAATTACCCACTTCGCTTTAGGGGTGATTAAGGCCATCCCCATTGTAGGGCATCTTGTTATGGGAGTCGATTGGT
TGATCTCTCATTGCTTCGAGAGGGGAGTCTCACACCCTGGGCTCCCTTCAGATATTGCTCCTATACTGAAAGTAGAAAAG
ATCGCGGGCCGAGATCATATTTCTAGAATCGAAAATCAGCTAAAGAGCCTTAGGAAAACTATCGAGGTTGAAGATCTAGA
TAAAGTCCACGGGCAATATCAAGAGAATCCTTATGCAGATATGGCCTCTAGTGAGGTTCTTAAACTCGATAAGGGAGTTC
ATGTTAGCGAGCTTGGCAAAGCCTTTTCTAGAGTTCGCAATCGCATCACCAGATCCTATAGTTATGCCCCTACTCCTCAG
TTGGACTCTATAGCTATTGTTGGTATAGATCTCGTCAGTCCTGAAGAACAAGAGAATTTAGTACGCTTGGCGAATGAGGT
CATTCAACTCTATCCCAAATCAAAGACAACTCTATATCTTCTTATCGATTTTAATAAGGAGTGGGTAGGGGATATCTCCT
CTGATAAGGAAAAACAGCTCCGTTCTCTAGGTCTACATTCTGAAGTTCAGTGTCTTTCCGTCTTGGAACCTCAGGGTGCC
GAGGGCGAAGATACGAAACACTTTGACCTTATGGTCGGCTGTTATGGGAAGGATTCTTACTTAAGGGAGGGTAAAATTTT
ACAGCAGGCCCTAGGGACTTCGTTAGGTACTGTTCCCTGGGTGAATGTTATGCACACATTGCCATCTAGGTATAGATCTC
GGCTTTCCTTACCTATAAATACCGAAAAGGATAAGACAGAGCTTTATAAAGAGATTTCTCGTACACACCATCAGTTGCAT
ACTTTGGGAATGGGACTTGGAGCCCAGGATTCAGGATTGCTCTTAGACCGGCAACGACTCCATGCTCCTTTATCTCAAGG
GTCTCACTGCCATTCCTATCTTGCAGATCTCACCCATGAAGAGCTGAAAATTTTGTTATTTTCAGCATTTGTGGATGCTA
AGAACATAAGTAAGAAAGAGCTTCGTGAGGTATCTCTAAATTTTGCTAACGATACTTCCGTAGAGTCGTGGCTGCGCTTT
TTACTTTTAGTGTCCTATGATGAGAAGGAGAAAGACGTAGTTGTCGTTTGTAATCATTCTGAACCTAATATCCTCGGCCT
GCCTCCTGAAGCAGTCTCTCAGCTTATTGAAGAGCTTAGCGATGAAGGCTATAGCTATCTGAATGTAGTGCGTTGTGATC
TCTCCGGGGAGACTACAGTTCAACAACGTCTGCTATTGAATGCCGATGAAGGGAGATCTATGACGGTGGTGATCTCAGAG
CTTCCTGAAGGGCACCCCGATATTCGGAATTTGCAGTTGGCATCCGAAAGAATTTTTGTTTCTCGTGAAAAAGAAGCTGC
TGATGCCTATGCTTCAGGATGTAAAGTGGTCGCTTTCGATGATGAGCATCTCCCTTGGGTCTCCAGTCATATTGCCTACG
CGGAGGAGATCAGAGAGAAACAAGAACAAACAATGCAAGGGTCTTTAACTGAAGAGCAGTTAGGAGCACTCCTCTGCAAC
ACAGTCTCCACAGAGAAAAATCTAGCCTTTGCTCTAGACGCCGTGATAAAACAGTCTGTGTGGAGATTCCGCAATCCGGA
TCTTTTTGCTTATGAGAGAGAAGCTCTAGAGGCTTCAGTAACAGATGCTTTAGTATCTTACGTTTCAAATTTAGACATGA
TACCGTACACAAGTTCTCAGGGCATAGTCATAGAAGATAGTAGTATCGTCCGTACCTCTCAAGAGCATACACTCATTGTG
AACTGTGCAGCATTCGATAAGTTAGCGAGCCAAATAGAGTTCTTATGCCCCAGTGACGTGTTGCCCATTTCTGGTAAAGA
CCCTTTGATTTCTGATGATGAGGATGAGGAACTGAATCCTAAAGTTTCATCTGCTGCAGACTCTAAAGATAAAACCTAG

Upstream 100 bases:

>100_bases
TATTTTCAGTGTACTTGATGTCTAATACAAATTGTTTATTTTGTATTTTTGGCACATCATTTAAATTCCTTGTACTTTTG
AATCTAAACGTAAATTTCTT

Downstream 100 bases:

>100_bases
GGAGTGAATTCTACACGAGAATCGAGAGGAGAGCGAGTCTTTCAAGGATTCATAATCCTTGTTAACGTATGCATAAACAA
GTGAAGCCATTGCAACGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 692; Mature: 691

Protein sequence:

>692_residues
MTHCLHGWFSVVRHHFVQAFNFSRPLYSRITHFALGVIKAIPIVGHLVMGVDWLISHCFERGVSHPGLPSDIAPILKVEK
IAGRDHISRIENQLKSLRKTIEVEDLDKVHGQYQENPYADMASSEVLKLDKGVHVSELGKAFSRVRNRITRSYSYAPTPQ
LDSIAIVGIDLVSPEEQENLVRLANEVIQLYPKSKTTLYLLIDFNKEWVGDISSDKEKQLRSLGLHSEVQCLSVLEPQGA
EGEDTKHFDLMVGCYGKDSYLREGKILQQALGTSLGTVPWVNVMHTLPSRYRSRLSLPINTEKDKTELYKEISRTHHQLH
TLGMGLGAQDSGLLLDRQRLHAPLSQGSHCHSYLADLTHEELKILLFSAFVDAKNISKKELREVSLNFANDTSVESWLRF
LLLVSYDEKEKDVVVVCNHSEPNILGLPPEAVSQLIEELSDEGYSYLNVVRCDLSGETTVQQRLLLNADEGRSMTVVISE
LPEGHPDIRNLQLASERIFVSREKEAADAYASGCKVVAFDDEHLPWVSSHIAYAEEIREKQEQTMQGSLTEEQLGALLCN
TVSTEKNLAFALDAVIKQSVWRFRNPDLFAYEREALEASVTDALVSYVSNLDMIPYTSSQGIVIEDSSIVRTSQEHTLIV
NCAAFDKLASQIEFLCPSDVLPISGKDPLISDDEDEELNPKVSSAADSKDKT

Sequences:

>Translated_692_residues
MTHCLHGWFSVVRHHFVQAFNFSRPLYSRITHFALGVIKAIPIVGHLVMGVDWLISHCFERGVSHPGLPSDIAPILKVEK
IAGRDHISRIENQLKSLRKTIEVEDLDKVHGQYQENPYADMASSEVLKLDKGVHVSELGKAFSRVRNRITRSYSYAPTPQ
LDSIAIVGIDLVSPEEQENLVRLANEVIQLYPKSKTTLYLLIDFNKEWVGDISSDKEKQLRSLGLHSEVQCLSVLEPQGA
EGEDTKHFDLMVGCYGKDSYLREGKILQQALGTSLGTVPWVNVMHTLPSRYRSRLSLPINTEKDKTELYKEISRTHHQLH
TLGMGLGAQDSGLLLDRQRLHAPLSQGSHCHSYLADLTHEELKILLFSAFVDAKNISKKELREVSLNFANDTSVESWLRF
LLLVSYDEKEKDVVVVCNHSEPNILGLPPEAVSQLIEELSDEGYSYLNVVRCDLSGETTVQQRLLLNADEGRSMTVVISE
LPEGHPDIRNLQLASERIFVSREKEAADAYASGCKVVAFDDEHLPWVSSHIAYAEEIREKQEQTMQGSLTEEQLGALLCN
TVSTEKNLAFALDAVIKQSVWRFRNPDLFAYEREALEASVTDALVSYVSNLDMIPYTSSQGIVIEDSSIVRTSQEHTLIV
NCAAFDKLASQIEFLCPSDVLPISGKDPLISDDEDEELNPKVSSAADSKDKT
>Mature_691_residues
THCLHGWFSVVRHHFVQAFNFSRPLYSRITHFALGVIKAIPIVGHLVMGVDWLISHCFERGVSHPGLPSDIAPILKVEKI
AGRDHISRIENQLKSLRKTIEVEDLDKVHGQYQENPYADMASSEVLKLDKGVHVSELGKAFSRVRNRITRSYSYAPTPQL
DSIAIVGIDLVSPEEQENLVRLANEVIQLYPKSKTTLYLLIDFNKEWVGDISSDKEKQLRSLGLHSEVQCLSVLEPQGAE
GEDTKHFDLMVGCYGKDSYLREGKILQQALGTSLGTVPWVNVMHTLPSRYRSRLSLPINTEKDKTELYKEISRTHHQLHT
LGMGLGAQDSGLLLDRQRLHAPLSQGSHCHSYLADLTHEELKILLFSAFVDAKNISKKELREVSLNFANDTSVESWLRFL
LLVSYDEKEKDVVVVCNHSEPNILGLPPEAVSQLIEELSDEGYSYLNVVRCDLSGETTVQQRLLLNADEGRSMTVVISEL
PEGHPDIRNLQLASERIFVSREKEAADAYASGCKVVAFDDEHLPWVSSHIAYAEEIREKQEQTMQGSLTEEQLGALLCNT
VSTEKNLAFALDAVIKQSVWRFRNPDLFAYEREALEASVTDALVSYVSNLDMIPYTSSQGIVIEDSSIVRTSQEHTLIVN
CAAFDKLASQIEFLCPSDVLPISGKDPLISDDEDEELNPKVSSAADSKDKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77544; Mature: 77412

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHCLHGWFSVVRHHFVQAFNFSRPLYSRITHFALGVIKAIPIVGHLVMGVDWLISHCFE
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGVSHPGLPSDIAPILKVEKIAGRDHISRIENQLKSLRKTIEVEDLDKVHGQYQENPYAD
HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH
MASSEVLKLDKGVHVSELGKAFSRVRNRITRSYSYAPTPQLDSIAIVGIDLVSPEEQENL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHH
VRLANEVIQLYPKSKTTLYLLIDFNKEWVGDISSDKEKQLRSLGLHSEVQCLSVLEPQGA
HHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCC
EGEDTKHFDLMVGCYGKDSYLREGKILQQALGTSLGTVPWVNVMHTLPSRYRSRLSLPIN
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TEKDKTELYKEISRTHHQLHTLGMGLGAQDSGLLLDRQRLHAPLSQGSHCHSYLADLTHE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHH
ELKILLFSAFVDAKNISKKELREVSLNFANDTSVESWLRFLLLVSYDEKEKDVVVVCNHS
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECC
EPNILGLPPEAVSQLIEELSDEGYSYLNVVRCDLSGETTVQQRLLLNADEGRSMTVVISE
CCCEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEEEC
LPEGHPDIRNLQLASERIFVSREKEAADAYASGCKVVAFDDEHLPWVSSHIAYAEEIREK
CCCCCCCHHHHHHHHHHHEEECCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH
QEQTMQGSLTEEQLGALLCNTVSTEKNLAFALDAVIKQSVWRFRNPDLFAYEREALEASV
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TDALVSYVSNLDMIPYTSSQGIVIEDSSIVRTSQEHTLIVNCAAFDKLASQIEFLCPSDV
HHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEEEHHHHHHHHHHHHHCCCCCC
LPISGKDPLISDDEDEELNPKVSSAADSKDKT
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
THCLHGWFSVVRHHFVQAFNFSRPLYSRITHFALGVIKAIPIVGHLVMGVDWLISHCFE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGVSHPGLPSDIAPILKVEKIAGRDHISRIENQLKSLRKTIEVEDLDKVHGQYQENPYAD
HCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH
MASSEVLKLDKGVHVSELGKAFSRVRNRITRSYSYAPTPQLDSIAIVGIDLVSPEEQENL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHH
VRLANEVIQLYPKSKTTLYLLIDFNKEWVGDISSDKEKQLRSLGLHSEVQCLSVLEPQGA
HHHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCC
EGEDTKHFDLMVGCYGKDSYLREGKILQQALGTSLGTVPWVNVMHTLPSRYRSRLSLPIN
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TEKDKTELYKEISRTHHQLHTLGMGLGAQDSGLLLDRQRLHAPLSQGSHCHSYLADLTHE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHH
ELKILLFSAFVDAKNISKKELREVSLNFANDTSVESWLRFLLLVSYDEKEKDVVVVCNHS
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECC
EPNILGLPPEAVSQLIEELSDEGYSYLNVVRCDLSGETTVQQRLLLNADEGRSMTVVISE
CCCEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHEECCCCCEEEEEEEC
LPEGHPDIRNLQLASERIFVSREKEAADAYASGCKVVAFDDEHLPWVSSHIAYAEEIREK
CCCCCCCHHHHHHHHHHHEEECCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH
QEQTMQGSLTEEQLGALLCNTVSTEKNLAFALDAVIKQSVWRFRNPDLFAYEREALEASV
HHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TDALVSYVSNLDMIPYTSSQGIVIEDSSIVRTSQEHTLIVNCAAFDKLASQIEFLCPSDV
HHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCCCCEEEEEHHHHHHHHHHHHHCCCCCC
LPISGKDPLISDDEDEELNPKVSSAADSKDKT
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA