| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835988
GI number: 15835988
Start: 521295
End: 523184
Strand: Reverse
Name: Not Available
Synonym: CPj0457
Alternate gene names: NA
Gene position: 523184-521295 (Counterclockwise)
Preceding gene: 15835989
Following gene: 15835987
Centisome position: 42.65
GC content: 42.96
Gene sequence:
>1890_bases ATGGCTTCTTGTTTATCTGCCTGGTTTTCTATAGTTCGTGAGCACTTTTATCGAGCCTTTGATTTTTCTTTGCCGTTTTG TGCTCGTATTACGGAATTTGTATTAGGGGTCATCAAGGGGATCCCTGTTGTGGGTCACATTATTGTTGGGATAGAGTGGC TCGTTTCTAGGTATTTAGAGAGTTTCGTGACCAAGCCGACATTTGTCTCTGATGTGGTGAGTCTTCTGAAAACAGAGAAA GTTGCTGGTCGCGATCACATTGCTCGTGTAGTGGAGACTTTGAAGAGGCAGAGAGTCGCTGTGGCTCCTGAAGATGAGGA TAAGGTCCATGGGAAGATTCCTGTGCATCCTTTCGGGGGAATCCAACCTGTAGAAGTTCTCACTCTCTATCCCGAAGTTC AAGATGCAACGTTAGGGCTTGCCTTCTCTAAAATTCGTAATCGTGTAAGACAGGCGTATTTGCAAGCTCCACGGCCAAAA CTGCAGAAGATTTACATCATAGGAAACGATATGAATCCTTTTGAAGTTGACGACTTCTTGCATCTAGCCCGTCTCTGTAA TGAAACTCAAAGACTCTATCCTGACGCTACGATTTCTCTATATCTAACAGCTTCTGGTGGTCGCAATGCTATGGACAAAA AGAATCGGAAGTTACTTAGTGATTGCGAACTAAACCCCAAGATTGCTTGTTTGGACTTTAATCAGGGTGATGTAGTCAAA CAAGCAACTTGTGACTGTTGGATGGTGTATCATGGGGAGAATGATCAAGGTACGTTGAATCAGATTCAGGAAGAGTTAGA AAAGTCAGGGGAGGAAACCCCTTGGATTCATGTGGGGCAAAAGCCTCTTTCACAATCCTTGTGGGATTTCTCTCCATTTT CATCTTTGGAGATGAAGGGAGATAAAGAGAAAGCTCTAGAGTACTCTGAATTAGAAAAAGAACAGCTATATTCTCGATTG GTATACGTAGGAGAGCGCTCTTCGGTTCTTAGTTTGGGGTTTGGAGATAGTCGGTCAGGGATCTTGATGGACCCAAAACG GGTGCATGCTCCCTTATCTGAAGGGCATTATTGTCATTCCTACCTTGCAGACTTAGAAAATCCCGGGTTACAAAAAACAA TTTTAGCGGCATTTCTGAATCCTAAGGAGTTGAGCAGTACCATACTGCAACCTATATCTCTAAATCTTATCTTAAATAGC AAAACTTACTTAAGGCAGCACTTTGGCTTTTTTGAGAGGATGAGCAGAAGTGATCGCAATGTGGTTGTCGTTGTATGTGA TTCTTGGTGGGGTACCGACTGGAAGGAGGAGCCAAGCTTCCAACACTTTATTATGGAGCTAGAGTGTCGAGGGTATTCGC ACTTCAATATTTTTGCCTTTAGATCTAATAGCATGTGTGTAGAAGAACGTAGGATCTTAAATGAAAGTTCTCAAGAGAAA GCCTTTACCATGATTTTCTGTGAGGATTCAGTATCTCAAGGAGATATCCGCTGTTTGCATTTGGCGTCTGAAGGAATGCT TTGTGGTAAAGAGTGCTATGCTGTCGATGTCTATACGTCAGGATGCGCGAACTTTATGATGGAAGAAGTCTTAACTTTGG AGCGAGAATCTAATCTGTGGAATAGAAAGCATGGTCTTTGGAAAAGAGAAGTTAGAAAACAGAAACAAGAAGCTGCTTTG GATCAAGACGAGAGCGAGATTTACGTTTGTAATCAGCTGACGGCGCAACAGAACTTCGCTTGTTCTTTAGATGCTGCAAT CCGCCAGTCTATATGGAGATCCCGTATGCCAGAACTTCTCTCTATTGAGAGACGGGCGTTAGGGGAACAACTCTTTACTA CTGTACATCACTACCTAACAACGCAAAAAAAGATCCTCAGGGGAATCTAG
Upstream 100 bases:
>100_bases AATTTCTTGTGGCTATAGGAGTCGCTAAGTATCTTAGAGATTGCTTTTTTCAAGTTTTTTTTAAATACTTCTTTCCTAAG TATTTCTTCCTAGTCGTGTT
Downstream 100 bases:
>100_bases AAACGCAGCAATCCGCGCAATTGTCTATAGATTTCACAGCATTAGATGAAGCTGTTGAATCTCTAGGATCGACTCTTAGC AGAGCTCCTTCAGAAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEK VAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPK LQKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRL VYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNS KTYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAAL DQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI
Sequences:
>Translated_629_residues MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEK VAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPK LQKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRL VYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNS KTYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAAL DQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI >Mature_628_residues ASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEKV AGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKL QKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVKQ ATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRLV YVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSK TYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEKA FTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAALD QDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72049; Mature: 71918
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLE CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SFVTKPTFVSDVVSLLKTEKVAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGG HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC IQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKLQKIYIIGNDMNPFEVDDFL CCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH HLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK HHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHH QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKG HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC DKEKALEYSELEKEQLYSRLVYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHS CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECHHHHCCCCCCCCHHHH YLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSKTYLRQHFGFFERMSRSDRN HHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC VVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK EEEEEECCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCC AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLW EEEEEEEECCCCCCCEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHH NRKHGLWKREVRKQKQEAALDQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELL HHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH SIERRALGEQLFTTVHHYLTTQKKILRGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLE CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SFVTKPTFVSDVVSLLKTEKVAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGG HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC IQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKLQKIYIIGNDMNPFEVDDFL CCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH HLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK HHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHH QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKG HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC DKEKALEYSELEKEQLYSRLVYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHS CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECHHHHCCCCCCCCHHHH YLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSKTYLRQHFGFFERMSRSDRN HHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC VVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK EEEEEECCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCC AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLW EEEEEEEECCCCCCCEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHH NRKHGLWKREVRKQKQEAALDQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELL HHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH SIERRALGEQLFTTVHHYLTTQKKILRGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA