Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835988

GI number: 15835988

Start: 521295

End: 523184

Strand: Reverse

Name: Not Available

Synonym: CPj0457

Alternate gene names: NA

Gene position: 523184-521295 (Counterclockwise)

Preceding gene: 15835989

Following gene: 15835987

Centisome position: 42.65

GC content: 42.96

Gene sequence:

>1890_bases
ATGGCTTCTTGTTTATCTGCCTGGTTTTCTATAGTTCGTGAGCACTTTTATCGAGCCTTTGATTTTTCTTTGCCGTTTTG
TGCTCGTATTACGGAATTTGTATTAGGGGTCATCAAGGGGATCCCTGTTGTGGGTCACATTATTGTTGGGATAGAGTGGC
TCGTTTCTAGGTATTTAGAGAGTTTCGTGACCAAGCCGACATTTGTCTCTGATGTGGTGAGTCTTCTGAAAACAGAGAAA
GTTGCTGGTCGCGATCACATTGCTCGTGTAGTGGAGACTTTGAAGAGGCAGAGAGTCGCTGTGGCTCCTGAAGATGAGGA
TAAGGTCCATGGGAAGATTCCTGTGCATCCTTTCGGGGGAATCCAACCTGTAGAAGTTCTCACTCTCTATCCCGAAGTTC
AAGATGCAACGTTAGGGCTTGCCTTCTCTAAAATTCGTAATCGTGTAAGACAGGCGTATTTGCAAGCTCCACGGCCAAAA
CTGCAGAAGATTTACATCATAGGAAACGATATGAATCCTTTTGAAGTTGACGACTTCTTGCATCTAGCCCGTCTCTGTAA
TGAAACTCAAAGACTCTATCCTGACGCTACGATTTCTCTATATCTAACAGCTTCTGGTGGTCGCAATGCTATGGACAAAA
AGAATCGGAAGTTACTTAGTGATTGCGAACTAAACCCCAAGATTGCTTGTTTGGACTTTAATCAGGGTGATGTAGTCAAA
CAAGCAACTTGTGACTGTTGGATGGTGTATCATGGGGAGAATGATCAAGGTACGTTGAATCAGATTCAGGAAGAGTTAGA
AAAGTCAGGGGAGGAAACCCCTTGGATTCATGTGGGGCAAAAGCCTCTTTCACAATCCTTGTGGGATTTCTCTCCATTTT
CATCTTTGGAGATGAAGGGAGATAAAGAGAAAGCTCTAGAGTACTCTGAATTAGAAAAAGAACAGCTATATTCTCGATTG
GTATACGTAGGAGAGCGCTCTTCGGTTCTTAGTTTGGGGTTTGGAGATAGTCGGTCAGGGATCTTGATGGACCCAAAACG
GGTGCATGCTCCCTTATCTGAAGGGCATTATTGTCATTCCTACCTTGCAGACTTAGAAAATCCCGGGTTACAAAAAACAA
TTTTAGCGGCATTTCTGAATCCTAAGGAGTTGAGCAGTACCATACTGCAACCTATATCTCTAAATCTTATCTTAAATAGC
AAAACTTACTTAAGGCAGCACTTTGGCTTTTTTGAGAGGATGAGCAGAAGTGATCGCAATGTGGTTGTCGTTGTATGTGA
TTCTTGGTGGGGTACCGACTGGAAGGAGGAGCCAAGCTTCCAACACTTTATTATGGAGCTAGAGTGTCGAGGGTATTCGC
ACTTCAATATTTTTGCCTTTAGATCTAATAGCATGTGTGTAGAAGAACGTAGGATCTTAAATGAAAGTTCTCAAGAGAAA
GCCTTTACCATGATTTTCTGTGAGGATTCAGTATCTCAAGGAGATATCCGCTGTTTGCATTTGGCGTCTGAAGGAATGCT
TTGTGGTAAAGAGTGCTATGCTGTCGATGTCTATACGTCAGGATGCGCGAACTTTATGATGGAAGAAGTCTTAACTTTGG
AGCGAGAATCTAATCTGTGGAATAGAAAGCATGGTCTTTGGAAAAGAGAAGTTAGAAAACAGAAACAAGAAGCTGCTTTG
GATCAAGACGAGAGCGAGATTTACGTTTGTAATCAGCTGACGGCGCAACAGAACTTCGCTTGTTCTTTAGATGCTGCAAT
CCGCCAGTCTATATGGAGATCCCGTATGCCAGAACTTCTCTCTATTGAGAGACGGGCGTTAGGGGAACAACTCTTTACTA
CTGTACATCACTACCTAACAACGCAAAAAAAGATCCTCAGGGGAATCTAG

Upstream 100 bases:

>100_bases
AATTTCTTGTGGCTATAGGAGTCGCTAAGTATCTTAGAGATTGCTTTTTTCAAGTTTTTTTTAAATACTTCTTTCCTAAG
TATTTCTTCCTAGTCGTGTT

Downstream 100 bases:

>100_bases
AAACGCAGCAATCCGCGCAATTGTCTATAGATTTCACAGCATTAGATGAAGCTGTTGAATCTCTAGGATCGACTCTTAGC
AGAGCTCCTTCAGAAATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEK
VAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPK
LQKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK
QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRL
VYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNS
KTYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK
AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAAL
DQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI

Sequences:

>Translated_629_residues
MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEK
VAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPK
LQKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK
QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRL
VYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNS
KTYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK
AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAAL
DQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI
>Mature_628_residues
ASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLESFVTKPTFVSDVVSLLKTEKV
AGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGGIQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKL
QKIYIIGNDMNPFEVDDFLHLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVKQ
ATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKGDKEKALEYSELEKEQLYSRLV
YVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHSYLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSK
TYLRQHFGFFERMSRSDRNVVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEKA
FTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLWNRKHGLWKREVRKQKQEAALD
QDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELLSIERRALGEQLFTTVHHYLTTQKKILRGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72049; Mature: 71918

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLE
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SFVTKPTFVSDVVSLLKTEKVAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGG
HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC
IQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKLQKIYIIGNDMNPFEVDDFL
CCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH
HLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK
HHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKG
HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC
DKEKALEYSELEKEQLYSRLVYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECHHHHCCCCCCCCHHHH
YLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSKTYLRQHFGFFERMSRSDRN
HHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC
VVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK
EEEEEECCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCC
AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLW
EEEEEEEECCCCCCCEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHH
NRKHGLWKREVRKQKQEAALDQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELL
HHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH
SIERRALGEQLFTTVHHYLTTQKKILRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASCLSAWFSIVREHFYRAFDFSLPFCARITEFVLGVIKGIPVVGHIIVGIEWLVSRYLE
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SFVTKPTFVSDVVSLLKTEKVAGRDHIARVVETLKRQRVAVAPEDEDKVHGKIPVHPFGG
HHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCC
IQPVEVLTLYPEVQDATLGLAFSKIRNRVRQAYLQAPRPKLQKIYIIGNDMNPFEVDDFL
CCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHH
HLARLCNETQRLYPDATISLYLTASGGRNAMDKKNRKLLSDCELNPKIACLDFNQGDVVK
HHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
QATCDCWMVYHGENDQGTLNQIQEELEKSGEETPWIHVGQKPLSQSLWDFSPFSSLEMKG
HCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCCCCCC
DKEKALEYSELEKEQLYSRLVYVGERSSVLSLGFGDSRSGILMDPKRVHAPLSEGHYCHS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECHHHHCCCCCCCCHHHH
YLADLENPGLQKTILAAFLNPKELSSTILQPISLNLILNSKTYLRQHFGFFERMSRSDRN
HHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC
VVVVVCDSWWGTDWKEEPSFQHFIMELECRGYSHFNIFAFRSNSMCVEERRILNESSQEK
EEEEEECCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCC
AFTMIFCEDSVSQGDIRCLHLASEGMLCGKECYAVDVYTSGCANFMMEEVLTLERESNLW
EEEEEEEECCCCCCCEEEEEEECCCCEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHH
NRKHGLWKREVRKQKQEAALDQDESEIYVCNQLTAQQNFACSLDAAIRQSIWRSRMPELL
HHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHH
SIERRALGEQLFTTVHHYLTTQKKILRGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA