Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835973

GI number: 15835973

Start: 485815

End: 486453

Strand: Direct

Name: Not Available

Synonym: CPj0440

Alternate gene names: NA

Gene position: 485815-486453 (Clockwise)

Preceding gene: 15835972

Following gene: 15835974

Centisome position: 39.61

GC content: 42.1

Gene sequence:

>639_bases
ATGGCAACTTCCGTAGCCCCATCACCAGTCCCCGAGAGCAGCCCTCTCTCTCATGCTACAGAAGTTCTCAATCTTCCTAA
TGCTTATATTACGCAGCCTCATCCGATCCCAGCGGCTCCTTGGGAGACCTTTCGCTCCAAACTTTCCACAAAGCATACGC
TCTGTTTTGCCTTAACACTACTGTTAACCTTAGGGGGAACGATCTCAGCAGGTTACGCAGGATATACTGGAAACTGGATC
ATCTGTGGCATCGGCTTGGGAATTATCGTACTCACACTGATTCTTGCTCTTCTTCTAGCAATCCCTCTTAAAAATAAGCA
GACAGGAACAAAACTGATTGATGAGATATCTCAAGACATTTCCTCTATAGGATCAGGATTTGTTCAGAGATACGGGTTGA
TGTTCTCTACAATTAAAAGCGTGCATCTTCCAGAGCTGACAACACAAAATCAAGAAAAAACAAGAATTTTAAATGAAATT
GAAGCGAAAAAGGAATCGATCCAAAATCTTGAGCTTAAAATTACTGAGTGCCAAAACAAGTTAGCACAGAAACAGCCGAA
ACGGAAATCATCTCAGAAATCATTTATGCGTAGTATTAAGCACCTCTCCAAGAACCCTGTAATTTTGTTCGATTGCTGA

Upstream 100 bases:

>100_bases
GTTCAAACTGCAATCAACTCTTTATCAAAAACGTTTTGAGCTTTCTCACAAGAATGAAAAGACAAATCAAAACTAGTTAG
CAACGATTCGAGGAAACAAC

Downstream 100 bases:

>100_bases
TTAGAAAAATTCTAGTCCTTTCATCCCCCTAAATCTAGGGAAATCTTCTTGAAAGTCCCTCCTGAGTAGGAAAATTATTA
GATAGTAATTTAAAAATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MATSVAPSPVPESSPLSHATEVLNLPNAYITQPHPIPAAPWETFRSKLSTKHTLCFALTLLLTLGGTISAGYAGYTGNWI
ICGIGLGIIVLTLILALLLAIPLKNKQTGTKLIDEISQDISSIGSGFVQRYGLMFSTIKSVHLPELTTQNQEKTRILNEI
EAKKESIQNLELKITECQNKLAQKQPKRKSSQKSFMRSIKHLSKNPVILFDC

Sequences:

>Translated_212_residues
MATSVAPSPVPESSPLSHATEVLNLPNAYITQPHPIPAAPWETFRSKLSTKHTLCFALTLLLTLGGTISAGYAGYTGNWI
ICGIGLGIIVLTLILALLLAIPLKNKQTGTKLIDEISQDISSIGSGFVQRYGLMFSTIKSVHLPELTTQNQEKTRILNEI
EAKKESIQNLELKITECQNKLAQKQPKRKSSQKSFMRSIKHLSKNPVILFDC
>Mature_211_residues
ATSVAPSPVPESSPLSHATEVLNLPNAYITQPHPIPAAPWETFRSKLSTKHTLCFALTLLLTLGGTISAGYAGYTGNWII
CGIGLGIIVLTLILALLLAIPLKNKQTGTKLIDEISQDISSIGSGFVQRYGLMFSTIKSVHLPELTTQNQEKTRILNEIE
AKKESIQNLELKITECQNKLAQKQPKRKSSQKSFMRSIKHLSKNPVILFDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y440_CHLPN (Q9Z8A3)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   F72077
- PIR:   F86545
- RefSeq:   NP_224640.1
- RefSeq:   NP_300497.1
- RefSeq:   NP_444862.1
- RefSeq:   NP_876730.1
- GeneID:   1467137
- GeneID:   895551
- GeneID:   919170
- GeneID:   963803
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0313
- KEGG:   cpj:CPj0440
- KEGG:   cpn:CPn0440
- KEGG:   cpt:CpB0456
- TIGR:   CP_0313
- OMA:   QDISSIG
- ProtClustDB:   CLSK263635
- BioCyc:   CPNE115711:CP_0313-MONOMER
- BioCyc:   CPNE115713:CPN0440-MONOMER
- BioCyc:   CPNE138677:CPJ0440-MONOMER
- BioCyc:   CPNE182082:CPB0456-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23252; Mature: 23120

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc206d68)-; HASH(0xce2548c)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSVAPSPVPESSPLSHATEVLNLPNAYITQPHPIPAAPWETFRSKLSTKHTLCFALTL
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLTLGGTISAGYAGYTGNWIICGIGLGIIVLTLILALLLAIPLKNKQTGTKLIDEISQDI
HHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSIGSGFVQRYGLMFSTIKSVHLPELTTQNQEKTRILNEIEAKKESIQNLELKITECQNK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQKQPKRKSSQKSFMRSIKHLSKNPVILFDC
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEH
>Mature Secondary Structure 
ATSVAPSPVPESSPLSHATEVLNLPNAYITQPHPIPAAPWETFRSKLSTKHTLCFALTL
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLTLGGTISAGYAGYTGNWIICGIGLGIIVLTLILALLLAIPLKNKQTGTKLIDEISQDI
HHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SSIGSGFVQRYGLMFSTIKSVHLPELTTQNQEKTRILNEIEAKKESIQNLELKITECQNK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQKQPKRKSSQKSFMRSIKHLSKNPVILFDC
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362