| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835972
GI number: 15835972
Start: 485263
End: 485790
Strand: Direct
Name: Not Available
Synonym: CPj0439
Alternate gene names: NA
Gene position: 485263-485790 (Clockwise)
Preceding gene: 15835970
Following gene: 15835973
Centisome position: 39.56
GC content: 41.29
Gene sequence:
>528_bases GTGTCTAGTACTTTAAACGGGGTATTTCCCTCATCCCTTCCGGAAGAGTCTGCTGATTTATTCATTACGAATAAGGAGAT CGTAGCTTTGGGGGAGAAGGGCAATGTTTTTCTCACCCACTCCATTCCTATGCATATTGCTGCGATTACGATCTTAGTGA TTGTAGCTCTTGCTGGAATCGCTATTATCTGTTTGGGTTGCTATAGCCAAAGCATTCTGTTGATTGCCGTTGGCATTGTT CTTACTATTTTGACTCTTCTCTGCCTACAAGCCTTGGTAGGATTTATTAAATTCATCCGGCAGCTCCCTCAGCAGCTCCA TACGACAGTACAATTTATCAGGGAGAAGATTCGACCTGAATCCTCTCTACAGCTTGTAACCAATGCACAGAGAAAAACCA CTCAAGATACGCTAAAGTTATACGAAGAACTCTGCGACCTCTCACAAAAAGAGTTCAAACTGCAATCAACTCTTTATCAA AAACGTTTTGAGCTTTCTCACAAGAATGAAAAGACAAATCAAAACTAG
Upstream 100 bases:
>100_bases GTTTTAAAAATTTGAATAACTAAGAGGCATGACTCGCTTACTAATTGACTAAAAATACCATTTTTCTTAAATTATTTCCT CAAATAATAGAGTTCTCTTT
Downstream 100 bases:
>100_bases TTAGCAACGATTCGAGGAAACAACATGGCAACTTCCGTAGCCCCATCACCAGTCCCCGAGAGCAGCCCTCTCTCTCATGC TACAGAAGTTCTCAATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSSTLNGVFPSSLPEESADLFITNKEIVALGEKGNVFLTHSIPMHIAAITILVIVALAGIAIICLGCYSQSILLIAVGIV LTILTLLCLQALVGFIKFIRQLPQQLHTTVQFIREKIRPESSLQLVTNAQRKTTQDTLKLYEELCDLSQKEFKLQSTLYQ KRFELSHKNEKTNQN
Sequences:
>Translated_175_residues MSSTLNGVFPSSLPEESADLFITNKEIVALGEKGNVFLTHSIPMHIAAITILVIVALAGIAIICLGCYSQSILLIAVGIV LTILTLLCLQALVGFIKFIRQLPQQLHTTVQFIREKIRPESSLQLVTNAQRKTTQDTLKLYEELCDLSQKEFKLQSTLYQ KRFELSHKNEKTNQN >Mature_174_residues SSTLNGVFPSSLPEESADLFITNKEIVALGEKGNVFLTHSIPMHIAAITILVIVALAGIAIICLGCYSQSILLIAVGIVL TILTLLCLQALVGFIKFIRQLPQQLHTTVQFIREKIRPESSLQLVTNAQRKTTQDTLKLYEELCDLSQKEFKLQSTLYQK RFELSHKNEKTNQN
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19556; Mature: 19425
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTLNGVFPSSLPEESADLFITNKEIVALGEKGNVFLTHSIPMHIAAITILVIVALAGI CCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH AIICLGCYSQSILLIAVGIVLTILTLLCLQALVGFIKFIRQLPQQLHTTVQFIREKIRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSLQLVTNAQRKTTQDTLKLYEELCDLSQKEFKLQSTLYQKRFELSHKNEKTNQN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSTLNGVFPSSLPEESADLFITNKEIVALGEKGNVFLTHSIPMHIAAITILVIVALAGI CCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHH AIICLGCYSQSILLIAVGIVLTILTLLCLQALVGFIKFIRQLPQQLHTTVQFIREKIRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSLQLVTNAQRKTTQDTLKLYEELCDLSQKEFKLQSTLYQKRFELSHKNEKTNQN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA