| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835907
GI number: 15835907
Start: 419927
End: 420673
Strand: Direct
Name: Not Available
Synonym: CPj0374
Alternate gene names: 15835907
Gene position: 419927-420673 (Clockwise)
Preceding gene: 15835906
Following gene: 15835908
Centisome position: 34.24
GC content: 46.59
Gene sequence:
>747_bases ATGACTCTATCCTTCCACACTCACCCTCTGAACTATTGGACTTTCGAAGAATTCGATGGTTTGCCTATACGCCACGGAGT CTTTTCAAAACAAAAGGATGCCGAGGGCACGGTCTTCGCAGCCAAGAATCCTGAGATTGCTTCAGCTCTCCAATCTCCGA AGTATTGCGACCTTCATCAACGCCACGGCACTTCCGTACGTTGTGTTACACCTACATCCCCCACCTACCAACCTGCAGAC GGACTGTGCACGCAGTCTCCGCTCCTCTCTCTCCATATCCGCCATTCCGATTGCCAAGCAGCTATCTTTTATGATCGAGA ACACCACGCAATCGCAAATGTACACAGCGGATGGCGAGGATTGCTTGGCAATATCTATGCTGTCACCGTAGGTACTATGA AAAAATTATTTCATACAAAACCACAAGATCTCTTCGTAGCTATCGGCCCTTCCATCGGTCCAGATTATGCTATCTATCCC GATTACGCTACGTTATTTCCTCGTAGCTTTCTTCCCTTTATGAATCCCAAAAACCATTTTGACCTGCGTGCGATTGCTCG CAAGCAACTTACGAATTTAGGAATCTCTAAAGACCGCATTTTTATCTCAGACCTCTGTACCTACACGGAACACGACGCTT TCTTTTCTTCAAGGTACCTTGCTCACCATCCCGATCCCAATCTCACAGGCCAACATTCAAAAAATAGAAATAATGTAACC GCCGTCCTTCTCCTACCCAGAGATTAA
Upstream 100 bases:
>100_bases TAAAAGCTCACATACCCATGGAAGATGCTGAAGAAGAATTAATTCGACTTTTACAAGAACATGGGGTATGGAAAGACCCT GAAGAAACTAAGTTGACAGT
Downstream 100 bases:
>100_bases AAAGATCCAGCCAAGCTTCTTTTCCTTTCCCCTAAGGACCTTAGCTTCTAGAAGAACATGCTTCGTTCCAACCCACTCAG AATTCAGTAATCTTCTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPAD GLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYP DYATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT AVLLLPRD
Sequences:
>Translated_248_residues MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPAD GLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYP DYATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT AVLLLPRD >Mature_247_residues TLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQRHGTSVRCVTPTSPTYQPADG LCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRGLLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPD YATLFPRSFLPFMNPKNHFDLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVTA VLLLPRD
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
Organism=Escherichia coli, GI1788945, Length=168, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 28002; Mature: 27871
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQ CEEEEECCCCCCEEHHHCCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHH RHGTSVRCVTPTSPTYQPADGLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRG HCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEHHHHCCHHH LLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPDYATLFPRSFLPFMNPKNHF HHCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHCCHHHCCCCCCCCCC DLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE AVLLLPRD EEEEEECC >Mature Secondary Structure TLSFHTHPLNYWTFEEFDGLPIRHGVFSKQKDAEGTVFAAKNPEIASALQSPKYCDLHQ EEEEECCCCCCEEHHHCCCCCEECCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHH RHGTSVRCVTPTSPTYQPADGLCTQSPLLSLHIRHSDCQAAIFYDREHHAIANVHSGWRG HCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEHHHHCCHHH LLGNIYAVTVGTMKKLFHTKPQDLFVAIGPSIGPDYAIYPDYATLFPRSFLPFMNPKNHF HHCCEEEEHHHHHHHHHCCCCCCEEEEECCCCCCCCEECCCHHHHCCHHHCCCCCCCCCC DLRAIARKQLTNLGISKDRIFISDLCTYTEHDAFFSSRYLAHHPDPNLTGQHSKNRNNVT HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEE AVLLLPRD EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1906060; 9205837; 9278503; 2066329 [H]