Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835864

GI number: 15835864

Start: 374710

End: 375771

Strand: Direct

Name: Not Available

Synonym: CPj0329

Alternate gene names: 15835864

Gene position: 374710-375771 (Clockwise)

Preceding gene: 15835863

Following gene: 15835869

Centisome position: 30.55

GC content: 35.5

Gene sequence:

>1062_bases
ATGAATAAAAGACAAAAAGATAAATTAAAAATCTGTGTTATTATTAGCACGTTGATTTTAGTAGGAATTTTTGCAAGAGC
TCCTCGTGGTGACACTTTTAAGACTTTTTTAAAGTCTGAAGAAGCTATCATCTACTCAAATCAATGCAATGAGGACATGC
GTAAAATTCTATGCGATGCTATAGAACACGCTGATGAAGAGATCTTCCTACGTATTTATAACCTCTCAGAACCCAAGATC
CAACAGAGTTTAACTCGACAAGCTCAAGCAAAAAACAAAGTTACGATCTACTATCAAAAATTTAAAATTCCCCAAATCTT
AAAGCAAGCCAGCAATGTAACTTTAGTCGAGCAACCTCCAGCAGGGCGTAAACTGATGCATCAAAAAGCTCTTTCCATAG
ATAAGAAAGATGCTTGGCTAGGATCTGCGAACTACACCAATCTTTCTCTACGTTTAGATAATAATCTCATTCTAGGAATG
CATAGCTCGGAGCTCTGTGATCTCATTATCACAAATACCTCTGGAGACTTTTCTATAAAGGATCAAACAGGAAAGTATTT
TGTTCTTCCTCAAGATCGTAAAATTGCAATACAAGCTGTACTCGAAAAAATCCAGACAGCTCAGAAAACCATCCAAGTTG
CTATGTTTGCTCTGACCCACTCGGAGATTATTCAAGCCTTACATCAAGCAAAACAACGAGGAATCCATGTAGATATTATC
ATTGATAGAAGTCATAGCAAACTTACTTTTAAGCAATTACGACAATTAAATATCAATAAAGACTTTGTTTCTATAAATAC
CGCACCCTGTACTCTTCACCATAAGTTTGCAGTTATAGATAATAAAACTCTACTTGCAGGATCTATAAATTGGTCTAAAG
GAAGATTCTCCTTAAATGATGAAAGCTTGATCATACTGGAAAACCTGACCAAACAACAAAATCAGAAACTTCGAATGATT
TGGAAAGATCTAGCTAAGCATTCAGAACATCCTACAGTAGACGATGAAGAAAAAGAAATTATAGAAAAAAGTCTTCCAGT
AGAAGAGCAAGAAGCAGCGTGA

Upstream 100 bases:

>100_bases
ATATTTAATAAGAATCTTATTCTATTAAACGTTTAATTAAATTAGTTATTTTTATTTTTAAAAATATATAAAAACAAAAA
AGCTATTTTAAGAGTAAAAA

Downstream 100 bases:

>100_bases
TGATCTAAAATAGTCACAGAAGAAGGCCTAGCTCGTGATTCAAGTATGTCTAGGCCTCTTCATCCTTTTGATAAAAAAGA
GTGGAGGCAGTTTCTAAGAC

Product: phopholipase D superfamily protein

Products: NA

Alternate protein names: PLD; Choline phosphatase [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNKRQKDKLKICVIISTLILVGIFARAPRGDTFKTFLKSEEAIIYSNQCNEDMRKILCDAIEHADEEIFLRIYNLSEPKI
QQSLTRQAQAKNKVTIYYQKFKIPQILKQASNVTLVEQPPAGRKLMHQKALSIDKKDAWLGSANYTNLSLRLDNNLILGM
HSSELCDLIITNTSGDFSIKDQTGKYFVLPQDRKIAIQAVLEKIQTAQKTIQVAMFALTHSEIIQALHQAKQRGIHVDII
IDRSHSKLTFKQLRQLNINKDFVSINTAPCTLHHKFAVIDNKTLLAGSINWSKGRFSLNDESLIILENLTKQQNQKLRMI
WKDLAKHSEHPTVDDEEKEIIEKSLPVEEQEAA

Sequences:

>Translated_353_residues
MNKRQKDKLKICVIISTLILVGIFARAPRGDTFKTFLKSEEAIIYSNQCNEDMRKILCDAIEHADEEIFLRIYNLSEPKI
QQSLTRQAQAKNKVTIYYQKFKIPQILKQASNVTLVEQPPAGRKLMHQKALSIDKKDAWLGSANYTNLSLRLDNNLILGM
HSSELCDLIITNTSGDFSIKDQTGKYFVLPQDRKIAIQAVLEKIQTAQKTIQVAMFALTHSEIIQALHQAKQRGIHVDII
IDRSHSKLTFKQLRQLNINKDFVSINTAPCTLHHKFAVIDNKTLLAGSINWSKGRFSLNDESLIILENLTKQQNQKLRMI
WKDLAKHSEHPTVDDEEKEIIEKSLPVEEQEAA
>Mature_353_residues
MNKRQKDKLKICVIISTLILVGIFARAPRGDTFKTFLKSEEAIIYSNQCNEDMRKILCDAIEHADEEIFLRIYNLSEPKI
QQSLTRQAQAKNKVTIYYQKFKIPQILKQASNVTLVEQPPAGRKLMHQKALSIDKKDAWLGSANYTNLSLRLDNNLILGM
HSSELCDLIITNTSGDFSIKDQTGKYFVLPQDRKIAIQAVLEKIQTAQKTIQVAMFALTHSEIIQALHQAKQRGIHVDII
IDRSHSKLTFKQLRQLNINKDFVSINTAPCTLHHKFAVIDNKTLLAGSINWSKGRFSLNDESLIILENLTKQQNQKLRMI
WKDLAKHSEHPTVDDEEKEIIEKSLPVEEQEAA

Specific function: Could be a virulence factor [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 40353; Mature: 40353

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQKDKLKICVIISTLILVGIFARAPRGDTFKTFLKSEEAIIYSNQCNEDMRKILCDA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHH
IEHADEEIFLRIYNLSEPKIQQSLTRQAQAKNKVTIYYQKFKIPQILKQASNVTLVEQPP
HHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCEEEEECCC
AGRKLMHQKALSIDKKDAWLGSANYTNLSLRLDNNLILGMHSSELCDLIITNTSGDFSIK
CCHHHHHHHHHCCCCCCCEECCCCCEEEEEEECCEEEEEECCCCCEEEEEECCCCCEEEE
DQTGKYFVLPQDRKIAIQAVLEKIQTAQKTIQVAMFALTHSEIIQALHQAKQRGIHVDII
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
IDRSHSKLTFKQLRQLNINKDFVSINTAPCTLHHKFAVIDNKTLLAGSINWSKGRFSLND
EECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEEEEECCEEEEECCCCCCCEEEECC
ESLIILENLTKQQNQKLRMIWKDLAKHSEHPTVDDEEKEIIEKSLPVEEQEAA
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MNKRQKDKLKICVIISTLILVGIFARAPRGDTFKTFLKSEEAIIYSNQCNEDMRKILCDA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHH
IEHADEEIFLRIYNLSEPKIQQSLTRQAQAKNKVTIYYQKFKIPQILKQASNVTLVEQPP
HHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCEEEEECCC
AGRKLMHQKALSIDKKDAWLGSANYTNLSLRLDNNLILGMHSSELCDLIITNTSGDFSIK
CCHHHHHHHHHCCCCCCCEECCCCCEEEEEEECCEEEEEECCCCCEEEEEECCCCCEEEE
DQTGKYFVLPQDRKIAIQAVLEKIQTAQKTIQVAMFALTHSEIIQALHQAKQRGIHVDII
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
IDRSHSKLTFKQLRQLNINKDFVSINTAPCTLHHKFAVIDNKTLLAGSINWSKGRFSLND
EECCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEEEEECCEEEEECCCCCCCEEEECC
ESLIILENLTKQQNQKLRMIWKDLAKHSEHPTVDDEEKEIIEKSLPVEEQEAA
CCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA