Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835863

GI number: 15835863

Start: 372863

End: 374617

Strand: Direct

Name: Not Available

Synonym: CPj0328

Alternate gene names: 15835863

Gene position: 372863-374617 (Clockwise)

Preceding gene: 15835862

Following gene: 15835864

Centisome position: 30.4

GC content: 44.05

Gene sequence:

>1755_bases
ATGTCTTTCTTAAGGCGTCATATTTCTCTTTTTCGTTCACAAAAACAACTTATTGATGTTTTTGCTCCCGTAAGTCCTAA
CCTCGAGTTAGCTGAGATTCATCGTCGTGTTATTGAAGATCAAGGCCCTGCCCTTCTTTTTCATAATGTCATCGGATCGT
CATTCCCAGTCCTGACCAATCTCTTTGGAACAAAACATCGTGTAGACCAACTTTTTTCTCAAGCTCCTGATAACCTCATC
GCTCGAGTTGCCCACCTTATTTCTTCTACACCAAAGCTTTCTTCTCTATGGAAATCTCGGGATCTATTAAAAAGAATAAG
CTCTTTAGGGCTCAAAAAAGCTCGATTCCGTCGCTTTCCTTTTGTTTCTATGTCCTCAGTTAACTTAGATCACCTTCCCT
TACTCACAAGCTGGCCTGAAGATGGTGGAGCCTTTCTCACACTTCCTCTTGTCTATACGGAATCGCCGACTCTTACTACA
CCCAATCTTGGGATGTATCGCGTGCAACGGTTCAATCAAAACACCATGGGCCTCCATTTTCAAATCCAGAAGGGCGGAGG
GATGCATCTGTATGAAGCAGAGCAAAAAAAGCAAAACCTTCCTGTTTCGGTATTTTTGTCTGGAAACCCCTTTTTAACCC
TTTCTGCGATTGCCCCCCTACCTGAGAATGTCTCGGAACTTCTCTTTGCTACCTTCCTCCAAGGAGCGAAGCTCCTTTAT
AAAAAAACAAACGACCATCCCCACCCTCTACTCTACGATGCGGAATTCATCCTGGTCGGAGAATCTCCGGCCGGGAAACG
TCGTCCTGAAGGTCCTTTTGGCGATCATTTCGGATACTACAGTCTCCAACATGACTTCCCTGAATTCCACTGTCATAAAA
TCTATCACAGAAAAGATGCAATCTATCCTGCTACAGTAGTCGGCAAACCCTACCAAGAAGATTTTTATATAGGGAACAAA
CTCCAAGAATACCTCTCCCCTTTATTTCCGTTAGTTATGCCTGGTGTGCGTAGACTTAAAAGTTACGGAGAATCAGGGTT
TCATGCACTGACTGCGGCTGTCGTTAAAGAACGCTATTGGAGAGAATCTCTAACCACAGCTCTTAGAATTCTTGGAGAGG
GCCAACTTTCCCTAACGAAATTCCTAATGGTCACAGACCAAGAGGTGCCTCTCGACAGGTTCTCCGTGGTTCTAGAAACC
ATTTTAGAGCGTCTACAGCCAGACCGAGATCTTATTATTTTCTCAGAAACTGCAAACGATACGTTAGACTATACAGGACC
AAGCTTAAATAAGGGCTCCAAGGGAATCTTCATGGGAATAGGAAAAGCCATCCGAGACCTTCCCCATGGATATCAGGGAG
GAAAAATCCATGGAGTTCAAGACATCGCTCCCTTTTGTCGTGGTTGCCTAGTGTTGGAAACATCCCTCGAGGACCGATGT
ATTAAATCTCTCCTTCACCATCCAGATCTAAAATCATGGCCTCTGATTATCCTTGCCGATAATCTGAGAGAAACCATTCA
AAGTGAAAAAGATTTTCTCTGGAGGACCTTCACACGATGTGCCCCAGCAAATGATCTTCACGCGCTCCACAGCCATTTTG
CTACTCACCGTCCTAATTACAACTTTCCCTTCGTTATCGATGCCCTGATGAAGCCTTCCTATCCTAAAGAAGTAGAGGTC
GACCCATCTACAAAACAAAAGGTTTCCGAACGATGGCACGCATATTTCCCCAATAAAGAAACTTTTTATATTTAA

Upstream 100 bases:

>100_bases
CTAGCGCTCTTCGTCACATTGATAAGCTCGGATTAGAGAAAGTTCTCGAAAGAGCTAAAAGTAAAAATTTTTAATTTAAC
TTAAGTATAGGGAAATATTT

Downstream 100 bases:

>100_bases
TAAGAATCTTATTCTATTAAACGTTTAATTAAATTAGTTATTTTTATTTTTAAAAATATATAAAAACAAAAAAGCTATTT
TAAGAGTAAAAAATGAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: 4-hydroxybenzoate DC; HBDC

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MSFLRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTNLFGTKHRVDQLFSQAPDNLI
ARVAHLISSTPKLSSLWKSRDLLKRISSLGLKKARFRRFPFVSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTT
PNLGMYRVQRFNQNTMGLHFQIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGAKLLY
KKTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYHRKDAIYPATVVGKPYQEDFYIGNK
LQEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVKERYWRESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLET
ILERLQPDRDLIIFSETANDTLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVLETSLEDRC
IKSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHALHSHFATHRPNYNFPFVIDALMKPSYPKEVEV
DPSTKQKVSERWHAYFPNKETFYI

Sequences:

>Translated_584_residues
MSFLRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTNLFGTKHRVDQLFSQAPDNLI
ARVAHLISSTPKLSSLWKSRDLLKRISSLGLKKARFRRFPFVSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTT
PNLGMYRVQRFNQNTMGLHFQIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGAKLLY
KKTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYHRKDAIYPATVVGKPYQEDFYIGNK
LQEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVKERYWRESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLET
ILERLQPDRDLIIFSETANDTLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVLETSLEDRC
IKSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHALHSHFATHRPNYNFPFVIDALMKPSYPKEVEV
DPSTKQKVSERWHAYFPNKETFYI
>Mature_583_residues
SFLRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTNLFGTKHRVDQLFSQAPDNLIA
RVAHLISSTPKLSSLWKSRDLLKRISSLGLKKARFRRFPFVSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTTP
NLGMYRVQRFNQNTMGLHFQIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGAKLLYK
KTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYHRKDAIYPATVVGKPYQEDFYIGNKL
QEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVKERYWRESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLETI
LERLQPDRDLIIFSETANDTLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVLETSLEDRCI
KSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHALHSHFATHRPNYNFPFVIDALMKPSYPKEVEVD
PSTKQKVSERWHAYFPNKETFYI

Specific function: Catalyzes the reversible decarboxylation of 4- hydroxybenzoate

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family

Homologues:

Organism=Escherichia coli, GI1790277, Length=442, Percent_Identity=32.3529411764706, Blast_Score=223, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BSDC_CHLPN (Q9Z8L0)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   A72092
- PIR:   H86531
- RefSeq:   NP_224533.1
- RefSeq:   NP_300387.1
- RefSeq:   NP_444977.1
- RefSeq:   NP_876614.1
- ProteinModelPortal:   Q9Z8L0
- SMR:   Q9Z8L0
- GeneID:   1467021
- GeneID:   894714
- GeneID:   919104
- GeneID:   963535
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0429
- KEGG:   cpj:CPj0328
- KEGG:   cpn:CPn0328
- KEGG:   cpt:CpB0338
- TIGR:   CP_0429
- HOGENOM:   HBG564733
- OMA:   AAGVHPL
- PhylomeDB:   Q9Z8L0
- ProtClustDB:   CLSK871177
- BioCyc:   CPNE115711:CP_0429-MONOMER
- BioCyc:   CPNE115713:CPN0328-MONOMER
- BioCyc:   CPNE138677:CPJ0328-MONOMER
- BioCyc:   CPNE182082:CPB0338-MONOMER
- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002
- TIGRFAMs:   TIGR00148
- TIGRFAMs:   TIGR03701

Pfam domain/function: PF01977 UbiD; SSF50475 FMN_binding

EC number: =4.1.1.61

Molecular weight: Translated: 66507; Mature: 66376

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTN
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHH
LFGTKHRVDQLFSQAPDNLIARVAHLISSTPKLSSLWKSRDLLKRISSLGLKKARFRRFP
HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
FVSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTTPNLGMYRVQRFNQNTMGLHF
CEEECCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEE
QIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGAKLLY
EEECCCCEEEEECHHHHCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
KKTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYHRKDA
HCCCCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCC
IYPATVVGKPYQEDFYIGNKLQEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVKERYW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLETILERLQPDRDLIIFSETAND
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
TLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVLETSLEDRC
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCEEEEECCHHHHH
IKSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHALHSHFATHRPNY
HHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
NFPFVIDALMKPSYPKEVEVDPSTKQKVSERWHAYFPNKETFYI
CCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
SFLRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTN
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHH
LFGTKHRVDQLFSQAPDNLIARVAHLISSTPKLSSLWKSRDLLKRISSLGLKKARFRRFP
HHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
FVSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTTPNLGMYRVQRFNQNTMGLHF
CEEECCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCEEEE
QIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGAKLLY
EEECCCCEEEEECHHHHCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
KKTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYHRKDA
HCCCCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCC
IYPATVVGKPYQEDFYIGNKLQEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVKERYW
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLETILERLQPDRDLIIFSETAND
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
TLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVLETSLEDRC
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHCCEEEEECCHHHHH
IKSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHALHSHFATHRPNY
HHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
NFPFVIDALMKPSYPKEVEVDPSTKQKVSERWHAYFPNKETFYI
CCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362