Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835838

GI number: 15835838

Start: 341540

End: 342580

Strand: Reverse

Name: Not Available

Synonym: CPj0303

Alternate gene names: NA

Gene position: 342580-341540 (Counterclockwise)

Preceding gene: 15835842

Following gene: 15835833

Centisome position: 27.93

GC content: 34.58

Gene sequence:

>1041_bases
ATGGACGTTTCTCGTAAAATTAATCGACACACTCAGTTTTACGTGGATTCGATAGACGGTGTCATCAAAAACTTTGATCA
TAAGCCTAGTGAAGATAAATCTCGAGATCATGAAGAATTAGAGGAAAAGCTTTTAACTATAACAAAACGTATTGTTGCTT
CTGCTCAAGAATTTCAGAATCGTAAGACGGACTCTAAAAACTACTACTTAAAAAAAACTCAATGGTTGCCATTCAAAAAT
GAAGAGTTGGAGCAAACTAAGGAATTGTTTGCCATGTTAACTTCGATGGATAAAAAAATAGCTCAGTTATTTTTTTATTC
TCCCGGATGTAGTAGCGACTGGGTAGAATTTACCGAAGTAATTTGTCATTTAAATGATTCTATAGGTTTGGGAGGGGTTT
TACTGTGTTGCGGATTATTCGAACAACAGTGTGAGCATGTTGTTACTGTGAATAAAAAGCTAGACCTACCGCTTCTTTTA
GGAACTACCGTTGTAAATAGTCTACGTTATTATTTAACCTATAGGAATATCTCTCTTTTGAATTGTCAGAGCATGAGTGA
GCTAGGCAAGGAGCTCGGGGATGTTTTAAAGCAACATGGAGTTGCTTTCACTTTAATTTTTAAAGAGATTGTGGATATAG
ATTTATTAAACTATGTGAAACTAATTCAAGGACTCAAGCGTAGTGGAAATATTCAAGCACGTATTTATGATAATGATGTG
CCTACTTTACCTTCAGTTTCATCGAGTCCTATTGCGTTGAGATATAGCTTAGCGAATACAATTCGGGGCCTTGCTTTACA
TGTAGATTTTTCTTCATTGAAGTTTATAAGCCCGTCTATACTTTCCAATACAGAGCACACTGCAAAAGCTTTAAACTCTG
GCGGAGAATGTTTTATCTTTTCTAATCTGGATGAATTCAATCTTGGAATGAAAATAGTCATGCAACTATTGCGGACAGGG
AAGATTAGCCCAGAAATTTTAAATAAAAATATCATGAAAATTCTCATGATAAAAAGAAGAGTACGTTCTTTATATATTTA
A

Upstream 100 bases:

>100_bases
GGCTATCCGAAGAAAAAATAATTAAGTTTTTTTAAAAAATCGAAAAAATTTTAATATGTTTCTCGTGGCAATTTAAAGAG
AACAAAAAGGATTACATCAC

Downstream 100 bases:

>100_bases
TTATTTGGTCTTTTTTTTGATTTCAAAACTAATAAAATAAATAGAATTTTAGATCTCTGAAGGAATCTCAGCAAGGCTGG
GAGTCGATAGATCTCTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN
EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL
GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV
PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG
KISPEILNKNIMKILMIKRRVRSLYI

Sequences:

>Translated_346_residues
MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN
EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL
GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV
PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG
KISPEILNKNIMKILMIKRRVRSLYI
>Mature_346_residues
MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN
EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL
GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV
PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG
KISPEILNKNIMKILMIKRRVRSLYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39472; Mature: 39472

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQN
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKTDSKNYYLKKTQWLPFKNEELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEV
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLLGTTVVNSLRYYLTYRNISLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHEECCEEEE
NCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIF
CCCCCCCCCCEEEEHHHHHHHHHEEEEEEHHHHHHCCHHHHCCCHHHHHHHCCCCCEEEE
SNLDEFNLGMKIVMQLLRTGKISPEILNKNIMKILMIKRRVRSLYI
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQN
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RKTDSKNYYLKKTQWLPFKNEELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEV
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLLGTTVVNSLRYYLTYRNISLL
HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHEECCEEEE
NCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIF
CCCCCCCCCCEEEEHHHHHHHHHEEEEEEHHHHHHCCHHHHCCCHHHHHHHCCCCCEEEE
SNLDEFNLGMKIVMQLLRTGKISPEILNKNIMKILMIKRRVRSLYI
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA