| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835838
GI number: 15835838
Start: 341540
End: 342580
Strand: Reverse
Name: Not Available
Synonym: CPj0303
Alternate gene names: NA
Gene position: 342580-341540 (Counterclockwise)
Preceding gene: 15835842
Following gene: 15835833
Centisome position: 27.93
GC content: 34.58
Gene sequence:
>1041_bases ATGGACGTTTCTCGTAAAATTAATCGACACACTCAGTTTTACGTGGATTCGATAGACGGTGTCATCAAAAACTTTGATCA TAAGCCTAGTGAAGATAAATCTCGAGATCATGAAGAATTAGAGGAAAAGCTTTTAACTATAACAAAACGTATTGTTGCTT CTGCTCAAGAATTTCAGAATCGTAAGACGGACTCTAAAAACTACTACTTAAAAAAAACTCAATGGTTGCCATTCAAAAAT GAAGAGTTGGAGCAAACTAAGGAATTGTTTGCCATGTTAACTTCGATGGATAAAAAAATAGCTCAGTTATTTTTTTATTC TCCCGGATGTAGTAGCGACTGGGTAGAATTTACCGAAGTAATTTGTCATTTAAATGATTCTATAGGTTTGGGAGGGGTTT TACTGTGTTGCGGATTATTCGAACAACAGTGTGAGCATGTTGTTACTGTGAATAAAAAGCTAGACCTACCGCTTCTTTTA GGAACTACCGTTGTAAATAGTCTACGTTATTATTTAACCTATAGGAATATCTCTCTTTTGAATTGTCAGAGCATGAGTGA GCTAGGCAAGGAGCTCGGGGATGTTTTAAAGCAACATGGAGTTGCTTTCACTTTAATTTTTAAAGAGATTGTGGATATAG ATTTATTAAACTATGTGAAACTAATTCAAGGACTCAAGCGTAGTGGAAATATTCAAGCACGTATTTATGATAATGATGTG CCTACTTTACCTTCAGTTTCATCGAGTCCTATTGCGTTGAGATATAGCTTAGCGAATACAATTCGGGGCCTTGCTTTACA TGTAGATTTTTCTTCATTGAAGTTTATAAGCCCGTCTATACTTTCCAATACAGAGCACACTGCAAAAGCTTTAAACTCTG GCGGAGAATGTTTTATCTTTTCTAATCTGGATGAATTCAATCTTGGAATGAAAATAGTCATGCAACTATTGCGGACAGGG AAGATTAGCCCAGAAATTTTAAATAAAAATATCATGAAAATTCTCATGATAAAAAGAAGAGTACGTTCTTTATATATTTA A
Upstream 100 bases:
>100_bases GGCTATCCGAAGAAAAAATAATTAAGTTTTTTTAAAAAATCGAAAAAATTTTAATATGTTTCTCGTGGCAATTTAAAGAG AACAAAAAGGATTACATCAC
Downstream 100 bases:
>100_bases TTATTTGGTCTTTTTTTTGATTTCAAAACTAATAAAATAAATAGAATTTTAGATCTCTGAAGGAATCTCAGCAAGGCTGG GAGTCGATAGATCTCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG KISPEILNKNIMKILMIKRRVRSLYI
Sequences:
>Translated_346_residues MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG KISPEILNKNIMKILMIKRRVRSLYI >Mature_346_residues MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQNRKTDSKNYYLKKTQWLPFKN EELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEVICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLL GTTVVNSLRYYLTYRNISLLNCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIFSNLDEFNLGMKIVMQLLRTG KISPEILNKNIMKILMIKRRVRSLYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39472; Mature: 39472
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKTDSKNYYLKKTQWLPFKNEELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEV CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLLGTTVVNSLRYYLTYRNISLL HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHEECCEEEE NCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIF CCCCCCCCCCEEEEHHHHHHHHHEEEEEEHHHHHHCCHHHHCCCHHHHHHHCCCCCEEEE SNLDEFNLGMKIVMQLLRTGKISPEILNKNIMKILMIKRRVRSLYI CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVSRKINRHTQFYVDSIDGVIKNFDHKPSEDKSRDHEELEEKLLTITKRIVASAQEFQN CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RKTDSKNYYLKKTQWLPFKNEELEQTKELFAMLTSMDKKIAQLFFYSPGCSSDWVEFTEV CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ICHLNDSIGLGGVLLCCGLFEQQCEHVVTVNKKLDLPLLLGTTVVNSLRYYLTYRNISLL HHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHEECCEEEE NCQSMSELGKELGDVLKQHGVAFTLIFKEIVDIDLLNYVKLIQGLKRSGNIQARIYDNDV CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC PTLPSVSSSPIALRYSLANTIRGLALHVDFSSLKFISPSILSNTEHTAKALNSGGECFIF CCCCCCCCCCEEEEHHHHHHHHHEEEEEEHHHHHHCCHHHHCCCHHHHHHHCCCCCEEEE SNLDEFNLGMKIVMQLLRTGKISPEILNKNIMKILMIKRRVRSLYI CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA