| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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The map label for this gene is incC
Identifier: 15835827
GI number: 15835827
Start: 328850
End: 329461
Strand: Direct
Name: incC
Synonym: CPj0292
Alternate gene names: NA
Gene position: 328850-329461 (Clockwise)
Preceding gene: 15835826
Following gene: 15835828
Centisome position: 26.81
GC content: 44.61
Gene sequence:
>612_bases ATGACCTCACCGATCCCCTTTCAGTCTAGTGGCGATGCCTCTTTCCTTGCCGAGCAGCCACAGCAACTCCCGTCTACTTC TGAATCTCAGCTAGTAACTCAATTGCTAACCATGATGAAGCATACTCAAGCATTATCCGAAACGGTTCTTCAACAACAAC GCGATCGATTACCAACCGCATCTATTATCCTTCAAGTAGGAGGAGCTCCTACAGGAGGAGCGGGTGCGCCTTTTCAACCA GGACCGGCAGATGATCATCATCATCCCATACCGCCGCCTGTTGTACCAGCTCAAATAGAAACAGAAATCACCACTATAAG ATCCGAGTTACAGCTCATGCGATCTACTCTACAACAAAGCACAAAAGGAGCTCGTACAGGAGTTCTAGTGGTTACTGCAA TCTTAATGACGATCTCCTTATTGGCTATTATTATCATAATACTAGCTGTGCTTGGATTTACGGGCGTCTTGCCTCAAGTA GCTTTATTGATGCAGGGTGAAACAAATCTGATTTGGGCTATGGTGAGCGGTTCTATTATTTGCTTTATTGCGCTAATTGG AACTCTAGGATTAATTTTAACAAATAAGAACACGCCTCTACCGGCTTCTTAA
Upstream 100 bases:
>100_bases TATTTGCTTGTGCACATTTGTAGCAAACTCTCTAATTAAACCCGTAATTACTGTCCGTACAACAAGATAATAAGTAAAAA ACACAAAAAATAGTGATTTT
Downstream 100 bases:
>100_bases AAAAATAAATTGAATTAGAATAAGTAATAGTAATTTTCTTCATACCTCCCTTGCAATTAATCACTTTGTTCTTATAAAAT GTCTTCTTTTGCTTGGGTAG
Product: inclusion membrane protein C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTSPIPFQSSGDASFLAEQPQQLPSTSESQLVTQLLTMMKHTQALSETVLQQQRDRLPTASIILQVGGAPTGGAGAPFQP GPADDHHHPIPPPVVPAQIETEITTIRSELQLMRSTLQQSTKGARTGVLVVTAILMTISLLAIIIIILAVLGFTGVLPQV ALLMQGETNLIWAMVSGSIICFIALIGTLGLILTNKNTPLPAS
Sequences:
>Translated_203_residues MTSPIPFQSSGDASFLAEQPQQLPSTSESQLVTQLLTMMKHTQALSETVLQQQRDRLPTASIILQVGGAPTGGAGAPFQP GPADDHHHPIPPPVVPAQIETEITTIRSELQLMRSTLQQSTKGARTGVLVVTAILMTISLLAIIIIILAVLGFTGVLPQV ALLMQGETNLIWAMVSGSIICFIALIGTLGLILTNKNTPLPAS >Mature_202_residues TSPIPFQSSGDASFLAEQPQQLPSTSESQLVTQLLTMMKHTQALSETVLQQQRDRLPTASIILQVGGAPTGGAGAPFQPG PADDHHHPIPPPVVPAQIETEITTIRSELQLMRSTLQQSTKGARTGVLVVTAILMTISLLAIIIIILAVLGFTGVLPQVA LLMQGETNLIWAMVSGSIICFIALIGTLGLILTNKNTPLPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21428; Mature: 21297
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPIPFQSSGDASFLAEQPQQLPSTSESQLVTQLLTMMKHTQALSETVLQQQRDRLPTA CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SIILQVGGAPTGGAGAPFQPGPADDHHHPIPPPVVPAQIETEITTIRSELQLMRSTLQQS HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKGARTGVLVVTAILMTISLLAIIIIILAVLGFTGVLPQVALLMQGETNLIWAMVSGSII HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH CFIALIGTLGLILTNKNTPLPAS HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TSPIPFQSSGDASFLAEQPQQLPSTSESQLVTQLLTMMKHTQALSETVLQQQRDRLPTA CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SIILQVGGAPTGGAGAPFQPGPADDHHHPIPPPVVPAQIETEITTIRSELQLMRSTLQQS HHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKGARTGVLVVTAILMTISLLAIIIIILAVLGFTGVLPQVALLMQGETNLIWAMVSGSII HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH CFIALIGTLGLILTNKNTPLPAS HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA