| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835813
GI number: 15835813
Start: 311679
End: 312497
Strand: Reverse
Name: Not Available
Synonym: CPj0278
Alternate gene names: 15835813
Gene position: 312497-311679 (Counterclockwise)
Preceding gene: 15835814
Following gene: 15835812
Centisome position: 25.48
GC content: 36.39
Gene sequence:
>819_bases ATGAAAAAAAAATTATCATTACTTGTAGGTTTAATTTTTGTTTTGAGTTCTTGCCATAAGGAAGATGCTCAGAATAAAAT ACGTATTGTAGCCAGTCCGACACCTCATGCGGAATTATTGGAGAGTTTACAGGAAGAGGCTAAAGATCTTGGAATCAAGC TGAAAATACTTCCAGTAGATGATTATCGTATTCCTAATCGTTTGCTTTTGGATAAACAAGTAGATGCAAATTACTTTCAA CATCAAGCTTTTCTTGATGACGAATGCGAGCGTTATGATTGTAAGGGTGAATTAGTTGTTATCGCTAAAGTTCATTTGGA ACCTCAAGCAATTTATTCTAAGAAACATTCTTCTTTAGAGCGCTTAAAAAGCCAGAAGAAACTGACTATAGCGATTCCTG TGGATCGTACGAATGCTCAGCGTGCTCTACACTTGTTAGAAGAGTGCGGACTCATTGTTTGCAAAGGGCCTGCTAATTTA AATATGACAGCTAAAGATGTCTGTGGGAAAGAAAATAGAAGTATCAACATATTAGAGGTGTCAGCTCCTCTTCTTGTCGG ATCTCTTCCTGACGTTGATGCTGCTGTCATTCCTGGAAATTTTGCTATAGCAGCAAACCTTTCTCCAAAGAAAGATAGTC TTTGTTTAGAGGATCTTTCGGTATCTAAGTATACAAACCTTGTTGTCATTCGTTCTGAAGACGTAGGTTCTCCTAAAATG ATAAAATTACAGAAGCTGTTTCAATCTCCTTCTGTACAACATTTTTTTGATACAAAATATCATGGGAATATTTTGACAAT GACTCAAGACAATGGTTAG
Upstream 100 bases:
>100_bases TCACAACATCAGTACTTGTCATCACTTTAGTTCTTATCGAGTCAGTGCGTATTCTAGGAGATTTCTGGGGGCGTCGTGTA TTAAAGTATAGAGGGATTCT
Downstream 100 bases:
>100_bases AGCAATAAGTCGTTGTACTTGTGCGCTCTTTTTGATCTTATTTCCTTCAATAAAATATTTCGATCTTTTACCCGAAATAT TTTATTGAAGGAAAAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKKKLSLLVGLIFVLSSCHKEDAQNKIRIVASPTPHAELLESLQEEAKDLGIKLKILPVDDYRIPNRLLLDKQVDANYFQ HQAFLDDECERYDCKGELVVIAKVHLEPQAIYSKKHSSLERLKSQKKLTIAIPVDRTNAQRALHLLEECGLIVCKGPANL NMTAKDVCGKENRSINILEVSAPLLVGSLPDVDAAVIPGNFAIAANLSPKKDSLCLEDLSVSKYTNLVVIRSEDVGSPKM IKLQKLFQSPSVQHFFDTKYHGNILTMTQDNG
Sequences:
>Translated_272_residues MKKKLSLLVGLIFVLSSCHKEDAQNKIRIVASPTPHAELLESLQEEAKDLGIKLKILPVDDYRIPNRLLLDKQVDANYFQ HQAFLDDECERYDCKGELVVIAKVHLEPQAIYSKKHSSLERLKSQKKLTIAIPVDRTNAQRALHLLEECGLIVCKGPANL NMTAKDVCGKENRSINILEVSAPLLVGSLPDVDAAVIPGNFAIAANLSPKKDSLCLEDLSVSKYTNLVVIRSEDVGSPKM IKLQKLFQSPSVQHFFDTKYHGNILTMTQDNG >Mature_272_residues MKKKLSLLVGLIFVLSSCHKEDAQNKIRIVASPTPHAELLESLQEEAKDLGIKLKILPVDDYRIPNRLLLDKQVDANYFQ HQAFLDDECERYDCKGELVVIAKVHLEPQAIYSKKHSSLERLKSQKKLTIAIPVDRTNAQRALHLLEECGLIVCKGPANL NMTAKDVCGKENRSINILEVSAPLLVGSLPDVDAAVIPGNFAIAANLSPKKDSLCLEDLSVSKYTNLVVIRSEDVGSPKM IKLQKLFQSPSVQHFFDTKYHGNILTMTQDNG
Specific function: Part of the ABC transporter complex metNIQ involved in methionine import. Binds the methionine and transfers it to the membrane-bound permease. It has also been shown to be involved in methionine sulfoxide transport (Probable) [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=263, Percent_Identity=32.319391634981, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1790093, Length=215, Percent_Identity=31.6279069767442, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 30266; Mature: 30266
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLSLLVGLIFVLSSCHKEDAQNKIRIVASPTPHAELLESLQEEAKDLGIKLKILPVD CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC DYRIPNRLLLDKQVDANYFQHQAFLDDECERYDCKGELVVIAKVHLEPQAIYSKKHSSLE CCCCCCEEEEECCCCCHHHHHHHCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHH RLKSQKKLTIAIPVDRTNAQRALHLLEECGLIVCKGPANLNMTAKDVCGKENRSINILEV HHHCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEE SAPLLVGSLPDVDAAVIPGNFAIAANLSPKKDSLCLEDLSVSKYTNLVVIRSEDVGSPKM ECCEEECCCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHH IKLQKLFQSPSVQHFFDTKYHGNILTMTQDNG HHHHHHHCCCCCCHHCCCEECCCEEEEECCCC >Mature Secondary Structure MKKKLSLLVGLIFVLSSCHKEDAQNKIRIVASPTPHAELLESLQEEAKDLGIKLKILPVD CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECC DYRIPNRLLLDKQVDANYFQHQAFLDDECERYDCKGELVVIAKVHLEPQAIYSKKHSSLE CCCCCCEEEEECCCCCHHHHHHHCCCCCHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHH RLKSQKKLTIAIPVDRTNAQRALHLLEECGLIVCKGPANLNMTAKDVCGKENRSINILEV HHHCCCEEEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHCCCCCCCEEEEEE SAPLLVGSLPDVDAAVIPGNFAIAANLSPKKDSLCLEDLSVSKYTNLVVIRSEDVGSPKM ECCEEECCCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHH IKLQKLFQSPSVQHFFDTKYHGNILTMTQDNG HHHHHHHCCCCCCHHCCCEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]