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Identifier: 15835814

GI number: 15835814

Start: 312494

End: 313159

Strand: Reverse

Name: Not Available

Synonym: CPj0279

Alternate gene names: 15835814

Gene position: 313159-312494 (Counterclockwise)

Preceding gene: 15835815

Following gene: 15835813

Centisome position: 25.53

GC content: 39.64

Gene sequence:

>666_bases
ATGCAATCCGATCTTATTCAGATTTTATTAAAAGAAACAGTCAATACACTTTATATGGTGTCGACTGCTTTTTTCTTCTC
TTGTGCTATTGGAGGGATGCTAGGTTTGGGGCTTTTCTGCACGTCGCCTAAGAGTCTTAATCCTAAGAAAAGCCTTTACG
CAACAATCTCAATGATTCTAAGTTTTCTTACCGCGATTCCATTTGCGATTCTTATTGTTATTCTTTTTCCGATCACGCGA
TGGATTGTAGGGACTTCTTTAGGCCCTACGGCTTCTATTGTTCCTCTCACTATCGGAGCCATTCCTTTTGTTGTTACTAT
AGTGGTTGATGCTTTTCGTAATTCAGCCCTTAACTATCTTGAATCTGCCGTTGCTTTGGGAATTCCTAAAAGGAATATTC
TTTTTGGTATACTTCTACCTGAAAGCTATCCACAGCTCATATTTTCTCTTAAGTCTCTTGTTGTTCATCTCATTTCATGT
TCGACTCTTGCAGGATTTGTTGGAGGCGGAGGGCTAGGACAGTTATTATTGCAGTATGGTTACTACCGTTTTGAATGGTC
TGTCACAACATCAGTACTTGTCATCACTTTAGTTCTTATCGAGTCAGTGCGTATTCTAGGAGATTTCTGGGGGCGTCGTG
TATTAAAGTATAGAGGGATTCTATGA

Upstream 100 bases:

>100_bases
AATTATTGTTTTGGAAGGGGAAGTTGAGCAACGTAAAAAAGCAAAAGAGCTTTTAATTGAGCTAGGCGTCGTTATTAAAG
AATTTTATTAGAAAAAGATT

Downstream 100 bases:

>100_bases
AAAAAAAATTATCATTACTTGTAGGTTTAATTTTTGTTTTGAGTTCTTGCCATAAGGAAGATGCTCAGAATAAAATACGT
ATTGTAGCCAGTCCGACACC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQSDLIQILLKETVNTLYMVSTAFFFSCAIGGMLGLGLFCTSPKSLNPKKSLYATISMILSFLTAIPFAILIVILFPITR
WIVGTSLGPTASIVPLTIGAIPFVVTIVVDAFRNSALNYLESAVALGIPKRNILFGILLPESYPQLIFSLKSLVVHLISC
STLAGFVGGGGLGQLLLQYGYYRFEWSVTTSVLVITLVLIESVRILGDFWGRRVLKYRGIL

Sequences:

>Translated_221_residues
MQSDLIQILLKETVNTLYMVSTAFFFSCAIGGMLGLGLFCTSPKSLNPKKSLYATISMILSFLTAIPFAILIVILFPITR
WIVGTSLGPTASIVPLTIGAIPFVVTIVVDAFRNSALNYLESAVALGIPKRNILFGILLPESYPQLIFSLKSLVVHLISC
STLAGFVGGGGLGQLLLQYGYYRFEWSVTTSVLVITLVLIESVRILGDFWGRRVLKYRGIL
>Mature_221_residues
MQSDLIQILLKETVNTLYMVSTAFFFSCAIGGMLGLGLFCTSPKSLNPKKSLYATISMILSFLTAIPFAILIVILFPITR
WIVGTSLGPTASIVPLTIGAIPFVVTIVVDAFRNSALNYLESAVALGIPKRNILFGILLPESYPQLIFSLKSLVVHLISC
STLAGFVGGGGLGQLLLQYGYYRFEWSVTTSVLVITLVLIESVRILGDFWGRRVLKYRGIL

Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG2011

COG function: function code P; ABC-type metal ion transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786397, Length=216, Percent_Identity=36.1111111111111, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24102; Mature: 24102

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSDLIQILLKETVNTLYMVSTAFFFSCAIGGMLGLGLFCTSPKSLNPKKSLYATISMIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SFLTAIPFAILIVILFPITRWIVGTSLGPTASIVPLTIGAIPFVVTIVVDAFRNSALNYL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESAVALGIPKRNILFGILLPESYPQLIFSLKSLVVHLISCSTLAGFVGGGGLGQLLLQYG
HHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
YYRFEWSVTTSVLVITLVLIESVRILGDFWGRRVLKYRGIL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSDLIQILLKETVNTLYMVSTAFFFSCAIGGMLGLGLFCTSPKSLNPKKSLYATISMIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SFLTAIPFAILIVILFPITRWIVGTSLGPTASIVPLTIGAIPFVVTIVVDAFRNSALNYL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESAVALGIPKRNILFGILLPESYPQLIFSLKSLVVHLISCSTLAGFVGGGGLGQLLLQYG
HHHHHHCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
YYRFEWSVTTSVLVITLVLIESVRILGDFWGRRVLKYRGIL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]