Click here to switch to the map view.

The map label for this gene is ybhI

Identifier: 15835742

GI number: 15835742

Start: 246823

End: 248235

Strand: Direct

Name: ybhI

Synonym: CPj0207

Alternate gene names: 15835742

Gene position: 246823-248235 (Clockwise)

Preceding gene: 15835741

Following gene: 15835743

Centisome position: 20.12

GC content: 45.51

Gene sequence:

>1413_bases
GTGAACAAAAAAAAACGTTTCTTATCTCTCCTCTTTCTGACTGCAGTACTTTTAGGCATTTGGTTCTCTCCCCATCCCGC
ATCTATAAATTCTAATGCTTGGCAACTCTTCGCTATATTCACAACTACTATCATGGGAATCATTTTCCAGCCCGTCCCCA
TGGGAGCTATTGCCATTATTGGAATCTCCACACTACTACTCACACAAACGTTAACTCTAGAACAAGGATTGTCAGGATTC
CATAATCCTATAGCGTGGTTAGTCTTCCTCTCCTTCTCAATAGCAAAAGGAATCATAAAAACAGGACTCGGTGAACGAAT
CGCATACTTCTTTGTCAGTGCTTTGGGGAAAAGTCCTCTAGGACTCAGCTATGGACTGGTAATCACAGATTTTTTCCTTG
CACCTGCAATCCCCAGCGTGACTGCTCGAGCTGGAGGGATTCTCTATCCCGTAGTCACGAGCTTATCAGATTCCTTTGGA
AGTTCCGCAGAAAAAGGAACTCAAGATCTTATCGGATCCTTCCTCATTAAAGTTGCCTATCAAAGCTCAGTGATCACCAG
CGCTATGTTCCTCACTGCTATGGCAGGAAACCCTCTGGTGGCAGCTCTAGCAGGCCACGTCGGGGTTTCTTTATCTTGGG
TTCTATGGGCAAAAGCCGCAATCATTCCAGGACTCCTCAGTCTATTCCTCATGCCGATCATACTCTACAAACTCTACCCA
CCAAAAATCACATCTTGTGAAGAGGCTATCCGATCGGCAAAACTTCGACTCAAAGAAATGGGGCCGCTAAAAAAAGAAGA
AAAAACAATATTGATGATCTTTTTCCTCCTTGTAGTCCTCTGGACTTTTGGAGATCTCTTAGGAATCTCAGCAACAACAG
CAGCCCTTATAGGACTGTCTCTCCTCATCCTCACTAATATTCTAGATTGGCAAAAAGATGTCATAGCAAATACAACAGCA
TGGGAAACATTCATCTGGTTCGGAGCCTTAATCATGATGGCTTCCTTCTTAAACCAACTCGGGTTTATCCCACTCGTAGG
AGACTCAGCAGCAGCACTGGTCAGTGGCCTCTCTTGGAAAATTGGCTTCCCTCTACTCTTCCTGATCTACTTCTACTCCC
ACTACCTTTTTGCTAGCAATACCGCGCATATCGGAGCCATGTATCCCATATTCCTCGCAGTCTCCATATCGTTAGGGACT
AATCCTATATTCGCAGCACTCACCCTAGCATTCGCAAGCAACCTTTTTGGAGGACTCACTCATTACGGATCCGGACCCGC
ACCCCTCTACTTCGGGTCACATCTCGTTACTGTCCAAGAGTGGTGGCGGTCAGGATTCGCTCTTAGCATTGTCAATATTG
TTATCTGGATAGGAATCGGAAGCTTGTGGTGGAAAGCCCTCGGACTCATTTAG

Upstream 100 bases:

>100_bases
AATGACACTCTAGAAGAAATGGAAAAATGGTTAGAAGACTTCCCCATAGAACCGTGACATCGATCAATCAATATTTCTAA
CCACTACACCGAGGTCCTAA

Downstream 100 bases:

>100_bases
AAACCAAGTCTTTTATATAGAAAATATTCTTTAGCAAGTTTATATTTTGTGAAATATGAAAGCTAAATCATAGGACCACC
TGTGATTTAGCCTTCTGTCA

Product: dicarboxylase translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNKKKRFLSLLFLTAVLLGIWFSPHPASINSNAWQLFAIFTTTIMGIIFQPVPMGAIAIIGISTLLLTQTLTLEQGLSGF
HNPIAWLVFLSFSIAKGIIKTGLGERIAYFFVSALGKSPLGLSYGLVITDFFLAPAIPSVTARAGGILYPVVTSLSDSFG
SSAEKGTQDLIGSFLIKVAYQSSVITSAMFLTAMAGNPLVAALAGHVGVSLSWVLWAKAAIIPGLLSLFLMPIILYKLYP
PKITSCEEAIRSAKLRLKEMGPLKKEEKTILMIFFLLVVLWTFGDLLGISATTAALIGLSLLILTNILDWQKDVIANTTA
WETFIWFGALIMMASFLNQLGFIPLVGDSAAALVSGLSWKIGFPLLFLIYFYSHYLFASNTAHIGAMYPIFLAVSISLGT
NPIFAALTLAFASNLFGGLTHYGSGPAPLYFGSHLVTVQEWWRSGFALSIVNIVIWIGIGSLWWKALGLI

Sequences:

>Translated_470_residues
MNKKKRFLSLLFLTAVLLGIWFSPHPASINSNAWQLFAIFTTTIMGIIFQPVPMGAIAIIGISTLLLTQTLTLEQGLSGF
HNPIAWLVFLSFSIAKGIIKTGLGERIAYFFVSALGKSPLGLSYGLVITDFFLAPAIPSVTARAGGILYPVVTSLSDSFG
SSAEKGTQDLIGSFLIKVAYQSSVITSAMFLTAMAGNPLVAALAGHVGVSLSWVLWAKAAIIPGLLSLFLMPIILYKLYP
PKITSCEEAIRSAKLRLKEMGPLKKEEKTILMIFFLLVVLWTFGDLLGISATTAALIGLSLLILTNILDWQKDVIANTTA
WETFIWFGALIMMASFLNQLGFIPLVGDSAAALVSGLSWKIGFPLLFLIYFYSHYLFASNTAHIGAMYPIFLAVSISLGT
NPIFAALTLAFASNLFGGLTHYGSGPAPLYFGSHLVTVQEWWRSGFALSIVNIVIWIGIGSLWWKALGLI
>Mature_470_residues
MNKKKRFLSLLFLTAVLLGIWFSPHPASINSNAWQLFAIFTTTIMGIIFQPVPMGAIAIIGISTLLLTQTLTLEQGLSGF
HNPIAWLVFLSFSIAKGIIKTGLGERIAYFFVSALGKSPLGLSYGLVITDFFLAPAIPSVTARAGGILYPVVTSLSDSFG
SSAEKGTQDLIGSFLIKVAYQSSVITSAMFLTAMAGNPLVAALAGHVGVSLSWVLWAKAAIIPGLLSLFLMPIILYKLYP
PKITSCEEAIRSAKLRLKEMGPLKKEEKTILMIFFLLVVLWTFGDLLGISATTAALIGLSLLILTNILDWQKDVIANTTA
WETFIWFGALIMMASFLNQLGFIPLVGDSAAALVSGLSWKIGFPLLFLIYFYSHYLFASNTAHIGAMYPIFLAVSISLGT
NPIFAALTLAFASNLFGGLTHYGSGPAPLYFGSHLVTVQEWWRSGFALSIVNIVIWIGIGSLWWKALGLI

Specific function: Might be a malate transporter [H]

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family [H]

Homologues:

Organism=Escherichia coli, GI1786986, Length=479, Percent_Identity=34.8643006263048, Blast_Score=268, Evalue=4e-73,
Organism=Escherichia coli, GI1789444, Length=483, Percent_Identity=33.9544513457557, Blast_Score=235, Evalue=5e-63,
Organism=Escherichia coli, GI1786829, Length=466, Percent_Identity=32.618025751073, Blast_Score=231, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 50836; Mature: 50836

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377; 12949159 [H]