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The map label for this gene is oppC_1

Identifier: 15835735

GI number: 15835735

Start: 241632

End: 242486

Strand: Direct

Name: oppC_1

Synonym: CPj0200

Alternate gene names: 15835735

Gene position: 241632-242486 (Clockwise)

Preceding gene: 15835734

Following gene: 15835736

Centisome position: 19.7

GC content: 42.69

Gene sequence:

>855_bases
ATGGAAAACCTATCCTCAGCTCCATCACGTAGCATTTGGAAATCTATAATCCAGAATAAAATGCTTGTTCTAGGCCTCAC
GACCCTCATAATTCTAATGCTTGGAGCCCTCCTTTTGCCATGGTTCTATCAAGATTATGAACAGACTTCATTAAAAGACA
TTCTTGTCTCTCCATGCTCGCGCTTTCCCTTTGGCACAGACACTCTAGGCAGGTGCATGTTTGCCCGAACTCTACGAGGT
CTACGACTCTCCTTACTCATAGCGACGATCGCTACACTTATTGATGTGTGTGTGGGACTTTTATGGGCCACTGTTGCTAT
ATCTGGAGGGAAAAAAATAGATTTCTTAATGATGCGAACCACAGAGATTCTCTTTTCTCTACCGAGAATCCCCATCATTA
TTCTTCTTTTAGTCATCTTCCATCACGGACTGCTCGCGCTAATCCTTGCAATGACAATTACAGGATGGATTCCTATATCT
CGAATTATCTACGGTCAGTTTCTACTCCTGAAAAATAAGCCCTTTGTCCTTTCTGCAAAAGCCATGCATGCCTCCACGTT
TCATATTCTAAAGAAGCATCTTCTTCCCAATACCCTAGCTCCCATCATATCTACATTGATTTTTACTATTCCTAACGCTA
TCTATACCGAAGCCTTCATTAGCTTCCTGGGTCTAGGAATACAGCCTCCTCAAGCAAGCCTCGGCACCTTAGTTAAAGAG
GGAATCAATGCTATAGATTACTACCCATGGCTATTTTTCTTCCCCTCTCTAATTATGATTGCCCTCTCTATAAGCTTCAA
TCTCATCGGCGAGGGGGCTAAAACACTATGTCTCGAAGAGGGATCTCATGGATAA

Upstream 100 bases:

>100_bases
TGACCTGATTCAATCCATTATAGATCCGCAAATCCGTTATGCGCACGGAAAGGAAAAAAAAAGAAAATAAAAGTCATAAG
AAAAAAAGAAGCATAAACTT

Downstream 100 bases:

>100_bases
CTACTTACTAAATATCAAGGATCTCACAATAACCTCTACAAACCCTAAGAGAACTCTAATTGAAAATTTATCACTACAGC
TCAAAGAAAATCGAAATCTT

Product: oligopeptide permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MENLSSAPSRSIWKSIIQNKMLVLGLTTLIILMLGALLLPWFYQDYEQTSLKDILVSPCSRFPFGTDTLGRCMFARTLRG
LRLSLLIATIATLIDVCVGLLWATVAISGGKKIDFLMMRTTEILFSLPRIPIIILLLVIFHHGLLALILAMTITGWIPIS
RIIYGQFLLLKNKPFVLSAKAMHASTFHILKKHLLPNTLAPIISTLIFTIPNAIYTEAFISFLGLGIQPPQASLGTLVKE
GINAIDYYPWLFFFPSLIMIALSISFNLIGEGAKTLCLEEGSHG

Sequences:

>Translated_284_residues
MENLSSAPSRSIWKSIIQNKMLVLGLTTLIILMLGALLLPWFYQDYEQTSLKDILVSPCSRFPFGTDTLGRCMFARTLRG
LRLSLLIATIATLIDVCVGLLWATVAISGGKKIDFLMMRTTEILFSLPRIPIIILLLVIFHHGLLALILAMTITGWIPIS
RIIYGQFLLLKNKPFVLSAKAMHASTFHILKKHLLPNTLAPIISTLIFTIPNAIYTEAFISFLGLGIQPPQASLGTLVKE
GINAIDYYPWLFFFPSLIMIALSISFNLIGEGAKTLCLEEGSHG
>Mature_284_residues
MENLSSAPSRSIWKSIIQNKMLVLGLTTLIILMLGALLLPWFYQDYEQTSLKDILVSPCSRFPFGTDTLGRCMFARTLRG
LRLSLLIATIATLIDVCVGLLWATVAISGGKKIDFLMMRTTEILFSLPRIPIIILLLVIFHHGLLALILAMTITGWIPIS
RIIYGQFLLLKNKPFVLSAKAMHASTFHILKKHLLPNTLAPIISTLIFTIPNAIYTEAFISFLGLGIQPPQASLGTLVKE
GINAIDYYPWLFFFPSLIMIALSISFNLIGEGAKTLCLEEGSHG

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=34.0350877192982, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1787054, Length=270, Percent_Identity=28.8888888888889, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787760, Length=258, Percent_Identity=31.0077519379845, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788505, Length=196, Percent_Identity=30.6122448979592, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=24.2677824267782, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789964, Length=277, Percent_Identity=27.4368231046931, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=26.4285714285714, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31461; Mature: 31461

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLSSAPSRSIWKSIIQNKMLVLGLTTLIILMLGALLLPWFYQDYEQTSLKDILVSPCS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFPFGTDTLGRCMFARTLRGLRLSLLIATIATLIDVCVGLLWATVAISGGKKIDFLMMRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TEILFSLPRIPIIILLLVIFHHGLLALILAMTITGWIPISRIIYGQFLLLKNKPFVLSAK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHH
AMHASTFHILKKHLLPNTLAPIISTLIFTIPNAIYTEAFISFLGLGIQPPQASLGTLVKE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GINAIDYYPWLFFFPSLIMIALSISFNLIGEGAKTLCLEEGSHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure
MENLSSAPSRSIWKSIIQNKMLVLGLTTLIILMLGALLLPWFYQDYEQTSLKDILVSPCS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFPFGTDTLGRCMFARTLRGLRLSLLIATIATLIDVCVGLLWATVAISGGKKIDFLMMRT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TEILFSLPRIPIIILLLVIFHHGLLALILAMTITGWIPISRIIYGQFLLLKNKPFVLSAK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEHH
AMHASTFHILKKHLLPNTLAPIISTLIFTIPNAIYTEAFISFLGLGIQPPQASLGTLVKE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GINAIDYYPWLFFFPSLIMIALSISFNLIGEGAKTLCLEEGSHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]