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The map label for this gene is oppB_1

Identifier: 15835734

GI number: 15835734

Start: 240657

End: 241601

Strand: Direct

Name: oppB_1

Synonym: CPj0199

Alternate gene names: 15835734

Gene position: 240657-241601 (Clockwise)

Preceding gene: 15835733

Following gene: 15835735

Centisome position: 19.62

GC content: 39.15

Gene sequence:

>945_bases
GTGTTCTCATACATAAAAAACCGAATTCTTTTTAATTTGCTTTCTCTATGGATTGTTTTGACACTCACGTTCCTAGTTAT
GAAAACCATCCCAGGAGATCCTTTCAATGACGAAGGCTGCAATGTTCTTTCCGAAGAGGTCTTACAAACCCTAAAGTCTC
GATACGGTTTAGATAAACCTCTCTATCAACAATACACACAATACCTCCACTCCATCGCAAAACTAGATTTTGGGAACTCG
TTAGTTTATAAAGATCGCAAAGTAACGAACATCATTTCGACTGCCTTTCCTATATCAGCAATCCTAGGATTGCAAAGTCT
TTTTCTCTCCATAGGAGGGGGGATCGCTCTCGGCACCATAGCAGCATTAAAAAAAAAGAAACAAAGACGCTATATTCTAG
GCGCCTCTATACTCCAAATCTCGATTCCTGCTTTTATATTCGCAACACTCTTACAATATGTCTTTGCTGTAAAAATTCCT
CTTCTTCCTATCGCCTGTTGGGGAAGCTTTACTCATACTATACTCCCGACTCTCGCACTTGCTGTAACTCCCATGGCCTT
CATCATACAGCTTACCTACTCTTCAGTATCCGCAGCATTAAACAAAGACTATGTCCTACTAGCCTATGCAAAAGGACTCT
CCCCACTTAAAGTCGTTATAAAACATATTTTACCCTACGCCATATTCCCAACCATTTCTTATTCCGCATTCCTAACTACT
ACAGTGATTACAGGAACCTTTGCTATCGAAAATATCTTCTGTATTCCTGGATTAGGTAAATGGTTTATTTGTAGTATCAA
ACAACGAGACTACCCAGTAGCCCTTGGCTTATCCGTATTTTATGGAACCTTATTTATGCTCTCTTCTTTACTTTCTGACC
TGATTCAATCCATTATAGATCCGCAAATCCGTTATGCGCACGGAAAGGAAAAAAAAAGAAAATAA

Upstream 100 bases:

>100_bases
TTTTTGTATTGAAGATGACTAAAAATGAAAGTATAATGACTTAAACATTTTAGAGCTGAGGTCTACTTCAAGGTAGAAAT
GCTTAATAGGGTTGTCTCTC

Downstream 100 bases:

>100_bases
AAGTCATAAGAAAAAAAGAAGCATAAACTTATGGAAAACCTATCCTCAGCTCCATCACGTAGCATTTGGAAATCTATAAT
CCAGAATAAAATGCTTGTTC

Product: oligopeptide permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MFSYIKNRILFNLLSLWIVLTLTFLVMKTIPGDPFNDEGCNVLSEEVLQTLKSRYGLDKPLYQQYTQYLHSIAKLDFGNS
LVYKDRKVTNIISTAFPISAILGLQSLFLSIGGGIALGTIAALKKKKQRRYILGASILQISIPAFIFATLLQYVFAVKIP
LLPIACWGSFTHTILPTLALAVTPMAFIIQLTYSSVSAALNKDYVLLAYAKGLSPLKVVIKHILPYAIFPTISYSAFLTT
TVITGTFAIENIFCIPGLGKWFICSIKQRDYPVALGLSVFYGTLFMLSSLLSDLIQSIIDPQIRYAHGKEKKRK

Sequences:

>Translated_314_residues
MFSYIKNRILFNLLSLWIVLTLTFLVMKTIPGDPFNDEGCNVLSEEVLQTLKSRYGLDKPLYQQYTQYLHSIAKLDFGNS
LVYKDRKVTNIISTAFPISAILGLQSLFLSIGGGIALGTIAALKKKKQRRYILGASILQISIPAFIFATLLQYVFAVKIP
LLPIACWGSFTHTILPTLALAVTPMAFIIQLTYSSVSAALNKDYVLLAYAKGLSPLKVVIKHILPYAIFPTISYSAFLTT
TVITGTFAIENIFCIPGLGKWFICSIKQRDYPVALGLSVFYGTLFMLSSLLSDLIQSIIDPQIRYAHGKEKKRK
>Mature_314_residues
MFSYIKNRILFNLLSLWIVLTLTFLVMKTIPGDPFNDEGCNVLSEEVLQTLKSRYGLDKPLYQQYTQYLHSIAKLDFGNS
LVYKDRKVTNIISTAFPISAILGLQSLFLSIGGGIALGTIAALKKKKQRRYILGASILQISIPAFIFATLLQYVFAVKIP
LLPIACWGSFTHTILPTLALAVTPMAFIIQLTYSSVSAALNKDYVLLAYAKGLSPLKVVIKHILPYAIFPTISYSAFLTT
TVITGTFAIENIFCIPGLGKWFICSIKQRDYPVALGLSVFYGTLFMLSSLLSDLIQSIIDPQIRYAHGKEKKRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=35.0649350649351, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=32.6797385620915, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1789965, Length=318, Percent_Identity=30.8176100628931, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789888, Length=317, Percent_Identity=29.9684542586751, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=27.4725274725275, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1787761, Length=338, Percent_Identity=26.0355029585799, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=24.1758241758242, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34955; Mature: 34955

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHCCCCCCCCC
>Mature Secondary Structure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CHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]