| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835725
GI number: 15835725
Start: 229534
End: 230892
Strand: Direct
Name: Not Available
Synonym: CPj0190
Alternate gene names: NA
Gene position: 229534-230892 (Clockwise)
Preceding gene: 15835724
Following gene: 15835729
Centisome position: 18.71
GC content: 40.4
Gene sequence:
>1359_bases ATGAGAAAACGTCACTCTTTCGACTCAACCTCTACAAAAAAAGAAGCCGTCAGTAAAGCTATCCAAAAAATCATCAAGAT TATGGAAACAACAGACCCTTCTTTAAATGTAGAAACCCCCAATGCAGAAATCGAAAGCATTCTCCAAGAAATCAAAGAAA TTAAACAAAAGTTATCGAAACAAGCAGAAGACCTCGGTCTTTTAGAAAAATACTGTTCTCAAGAAACCCTCTCTAATCTT GAAAACACTAACGCATCGCTCAAGCTTTCCATAGGCAGTGTCATAGAAGAACTCGCTTCTCTCAAACAACTTGTAGAGGA AAGTATTGAAGAATCCTTAGGGCAACAAGACCAACTCATCCAATCTGTACTTATTGAGATCTCTGATAAGTTTCTTTCCT CTATAGGGGAGACTCTTTCTGGAAATCTTGATATGAACCAGAACGTAATTCAAGGACTCCTAATCAAAGAAAACCCTGAA AAATCTGAAGCAGCTTCTGTAGGATATGTACAGACTCTACTAGAGCCTCTAAGTAAAAGGATCGGCGAGACTCATAAGAA GGTCGCTACTCATGATGTGAATATCTCCTCCTTGCAATTTCATATGATGTCAGTGGCAGGAGGTAGGTTCCGTGGTCATA TTGATATGAATGGCTATCGCGTTTTAGGATTGGGAGAGCCTAAAAATGGAGAAGATGCTGTCTCTAAGGATTATTTAGAA CGTTACGTAAGCTCGCAGCTCACTATAGACAAAGTTGAAGACAAGCCCATTACAAAGCCAAATAAGGGAAAATTACTCTA TTCCCAAGGGACGAGTCCTAAACTTGAAGGTCCCTTACCTTTAGGGCTTCTGACATCTGGAATCTCAGGATTTACTTGGA AAAGTGCAAGCAAATCTAACGATGGAAGCTTCCCTTTTAGTGCTTTAAGACACAAGGAAACAGAGTCGGATACAGATTGC TTCCAGATTACTTCCACAACGCTCTCAGGAAATCAAGCAGGAACCTACACCTGGTCCTTATCTTTAAAAGTGTTGGTGCC TTCAATCTTCCAAATCGAAAAACCAGAAGTCCAGCTCTCTCTTGTCTACTCTTATGAAGACTGGCTTCCTATCGATAATA TCTTCAATATGTCTCAGCCTAGGACCATACCACTAGCTCTCCTAGGACAAACAATGCTTGCAGGACAAAAATATGATATC CTAGAGCTCGCCGCACATCAAACAAACCAAACTCTAATGATTAGCCCGAACTGTTCTCGATTCTCTCTACAATTAAAACA AACTAATCAGTTTGAAAACTCCCCTGTCGATTTCTATATTGTCCATGCCGCTCATTCCTGCCACTGGTCAGGATTCTAA
Upstream 100 bases:
>100_bases AAATAAATAGAATCAATATAAAAACTTAACAGTTCTTTTTAATTAATTATTTTTATAAATCTTAAAAATAAAATTAAATT AATTATTAGGAATAAAACTC
Downstream 100 bases:
>100_bases AGTATCACTACAGCTGCTCTAGCAGCTGTAGTCCTATTGAGCAGAGTGGATATATTTCGATAATGGATGACCAGAATCGA GCTCTCCGTCACGCTTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MRKRHSFDSTSTKKEAVSKAIQKIIKIMETTDPSLNVETPNAEIESILQEIKEIKQKLSKQAEDLGLLEKYCSQETLSNL ENTNASLKLSIGSVIEELASLKQLVEESIEESLGQQDQLIQSVLIEISDKFLSSIGETLSGNLDMNQNVIQGLLIKENPE KSEAASVGYVQTLLEPLSKRIGETHKKVATHDVNISSLQFHMMSVAGGRFRGHIDMNGYRVLGLGEPKNGEDAVSKDYLE RYVSSQLTIDKVEDKPITKPNKGKLLYSQGTSPKLEGPLPLGLLTSGISGFTWKSASKSNDGSFPFSALRHKETESDTDC FQITSTTLSGNQAGTYTWSLSLKVLVPSIFQIEKPEVQLSLVYSYEDWLPIDNIFNMSQPRTIPLALLGQTMLAGQKYDI LELAAHQTNQTLMISPNCSRFSLQLKQTNQFENSPVDFYIVHAAHSCHWSGF
Sequences:
>Translated_452_residues MRKRHSFDSTSTKKEAVSKAIQKIIKIMETTDPSLNVETPNAEIESILQEIKEIKQKLSKQAEDLGLLEKYCSQETLSNL ENTNASLKLSIGSVIEELASLKQLVEESIEESLGQQDQLIQSVLIEISDKFLSSIGETLSGNLDMNQNVIQGLLIKENPE KSEAASVGYVQTLLEPLSKRIGETHKKVATHDVNISSLQFHMMSVAGGRFRGHIDMNGYRVLGLGEPKNGEDAVSKDYLE RYVSSQLTIDKVEDKPITKPNKGKLLYSQGTSPKLEGPLPLGLLTSGISGFTWKSASKSNDGSFPFSALRHKETESDTDC FQITSTTLSGNQAGTYTWSLSLKVLVPSIFQIEKPEVQLSLVYSYEDWLPIDNIFNMSQPRTIPLALLGQTMLAGQKYDI LELAAHQTNQTLMISPNCSRFSLQLKQTNQFENSPVDFYIVHAAHSCHWSGF >Mature_452_residues MRKRHSFDSTSTKKEAVSKAIQKIIKIMETTDPSLNVETPNAEIESILQEIKEIKQKLSKQAEDLGLLEKYCSQETLSNL ENTNASLKLSIGSVIEELASLKQLVEESIEESLGQQDQLIQSVLIEISDKFLSSIGETLSGNLDMNQNVIQGLLIKENPE KSEAASVGYVQTLLEPLSKRIGETHKKVATHDVNISSLQFHMMSVAGGRFRGHIDMNGYRVLGLGEPKNGEDAVSKDYLE RYVSSQLTIDKVEDKPITKPNKGKLLYSQGTSPKLEGPLPLGLLTSGISGFTWKSASKSNDGSFPFSALRHKETESDTDC FQITSTTLSGNQAGTYTWSLSLKVLVPSIFQIEKPEVQLSLVYSYEDWLPIDNIFNMSQPRTIPLALLGQTMLAGQKYDI LELAAHQTNQTLMISPNCSRFSLQLKQTNQFENSPVDFYIVHAAHSCHWSGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y190_CHLPN (Q9Z8Z4)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: E72108 - PIR: E81562 - PIR: F86514 - RefSeq: NP_224399.1 - RefSeq: NP_300249.1 - RefSeq: NP_445120.1 - RefSeq: NP_876469.1 - GeneID: 1466876 - GeneID: 895040 - GeneID: 918986 - GeneID: 962921 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0577 - KEGG: cpj:CPj0190 - KEGG: cpn:CPn0190 - KEGG: cpt:CpB0193 - TIGR: CP_0577 - HOGENOM: HBG056271 - OMA: MIQKTIT - ProtClustDB: CLSK400534 - BioCyc: CPNE115711:CP_0577-MONOMER - BioCyc: CPNE115713:CPN0190-MONOMER - BioCyc: CPNE138677:CPJ0190-MONOMER - BioCyc: CPNE182082:CPB0193-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50179; Mature: 50179
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRHSFDSTSTKKEAVSKAIQKIIKIMETTDPSLNVETPNAEIESILQEIKEIKQKLSK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH QAEDLGLLEKYCSQETLSNLENTNASLKLSIGSVIEELASLKQLVEESIEESLGQQDQLI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH QSVLIEISDKFLSSIGETLSGNLDMNQNVIQGLLIKENPEKSEAASVGYVQTLLEPLSKR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHH IGETHKKVATHDVNISSLQFHMMSVAGGRFRGHIDMNGYRVLGLGEPKNGEDAVSKDYLE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH RYVSSQLTIDKVEDKPITKPNKGKLLYSQGTSPKLEGPLPLGLLTSGISGFTWKSASKSN HHHHCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC DGSFPFSALRHKETESDTDCFQITSTTLSGNQAGTYTWSLSLKVLVPSIFQIEKPEVQLS CCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHHHCHHHHCCCCCEEEE LVYSYEDWLPIDNIFNMSQPRTIPLALLGQTMLAGQKYDILELAAHQTNQTLMISPNCSR EEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCE FSLQLKQTNQFENSPVDFYIVHAAHSCHWSGF EEEEEECCCCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MRKRHSFDSTSTKKEAVSKAIQKIIKIMETTDPSLNVETPNAEIESILQEIKEIKQKLSK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH QAEDLGLLEKYCSQETLSNLENTNASLKLSIGSVIEELASLKQLVEESIEESLGQQDQLI HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH QSVLIEISDKFLSSIGETLSGNLDMNQNVIQGLLIKENPEKSEAASVGYVQTLLEPLSKR HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHH IGETHKKVATHDVNISSLQFHMMSVAGGRFRGHIDMNGYRVLGLGEPKNGEDAVSKDYLE HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHH RYVSSQLTIDKVEDKPITKPNKGKLLYSQGTSPKLEGPLPLGLLTSGISGFTWKSASKSN HHHHCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC DGSFPFSALRHKETESDTDCFQITSTTLSGNQAGTYTWSLSLKVLVPSIFQIEKPEVQLS CCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEHHHHCHHHHCCCCCEEEE LVYSYEDWLPIDNIFNMSQPRTIPLALLGQTMLAGQKYDILELAAHQTNQTLMISPNCSR EEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCE FSLQLKQTNQFENSPVDFYIVHAAHSCHWSGF EEEEEECCCCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362