| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835724
GI number: 15835724
Start: 226696
End: 229443
Strand: Direct
Name: Not Available
Synonym: CPj0189
Alternate gene names: NA
Gene position: 226696-229443 (Clockwise)
Preceding gene: 15835723
Following gene: 15835725
Centisome position: 18.48
GC content: 40.21
Gene sequence:
>2748_bases ATAATCAATCTATCAGCAGAGGCAACACATACCAATGATGGTAAGATTTCTATGACAGCCTCTGGCGAGGGAAATCAAAT TCAAATGAAGCTTCAAGGCCATATTCATAAATCCACATTTTATATTGTAGAAGGGAGTTCTTCGTTCATAGAACTTAAAC CTGAGCTCGCCTCAGCTCTTTGCAACCAGATCATTCCGCTGTCCACACCCATTACTAGTAAGCAAATCCATGCTACGGTC TCTTATGCTAAAATTCCCTTGGATATTACGAAATGGAAACATATTGAAATTACCTCTCAAGCACAGCTCCCTGAAGTCGC AATACATCCGAAAGACCCTAATCTTGCATTACAGCTGCGCGACACAAAGCTAGGAATTAAAAAGACGGAGAAATTCTCAG ACATCCGTTACTCCTCATCTACAGTCTTAGGAGGAGCTTCTCCCTCTCACCTTAATGGTTTAATCAGTATAGATAACAAA AAACATCTTACTAAATTTCGTCTACAACAAGCACAACTCCCCCACACCTATCTAAGAGCCATTTTCCCTCAACCTTTCGT GATCAATGTTCCCCTGGATGTTGCTTATTATTCATTAAATATCGAAGGGACGTACAAAAATGCTCACTTAGAGGCAGATG CTATCCTAGATAACCCGCTATTGAAATTGTCATGCTCCATGTCTGGAGCATGGAAAAATTTTCTTTTTAAAGGGCAAGGA ACGTACCACTTTAATAAAAAATGGCAGGAGATTCTCTCTCCCCACTTCTCTTACGCTGAAGCTAGATTCTCAGGAAAAGC ACAAATTACCGATACGAATCTCTTTTTCCCTAAATTTTCTGGAAAAATTACTGCAAGAGAAAATGAGCTGCTCATCCATG CAAAATTTGGTTCCCCTAATGAACCTATAAAACCTGAAACTACCTCTATACTCATCCACGGACAATTTTGTTCTCTGCCA CTCAGCCTAGTTTCTAATCACCTAGCCCCCTTCCATTTGAAGAAATTGACATTTTCCTTCCATACGGATGGAGGTAAGTT TGTAACCAAAGGAAACCTCCAAGCTCTTATTGAGAATCCAGACTATCCCGACCTAAATAATACGCGTATCCTAATCCCTG ATCTTCTTCTTTCTCTTGATGAATCCTCAACTTCACCTTCTTCAAAAGACTTGAAAATCCAGGGTTCTGGAGAGATATTT TCTTTGCCTCTGGATTCTATTACTAAGACCTATGGGAAACAAGTGCGTCTCTCTCCTTATTTTGGTTCCTCTGGAGACTT GAACTTTGTAGTAAACTACAATCCTAAAGATCAGAATAAGCTCACACTACTATCTAACTTTAAGTCAGAAGCTCTCCTAG GAGAACTGAAGTTAGTCATGGACTTTTCTATGAAGCTATCTTCAGGAACTCAGGGAACTCTCCAGTGGGAAGTGAGCCCA GAACGTTATGCAAGTTTCTTTAAAAACGCATCATGCTCTCCCACCTGTTTGCTTCATAGAACTGCAAATGTACGCTTAGA CATCTCAAAACTCTCTTGTCCAGAGGAAACCAAAGGTTTATCTTGTCTCACGCTTCTTGCCGCAGGAGGACTTGAAGGTT CATTAGAAGCAACACCGTTGATCTTCTATGATAATGTGTCTAAAGAGACTTTTATTATTAATGACTTTAAAGGTTCTTTG CGAGCCAACAATTTAGACGCTAAAATAGAATATGATCTTAAAGGCTCGTGTCTAGCTCCTAGGCAAGACTCTAAAACTCT TGCAGAATTTTCATTAGAAGGACAGGTAGATCATCTGTTCTCTCCAGAGTCTCGAGAATTTAAACAAACTGCAAATTGGA TTCACATACCCTCTTCGTTCATTGCTGGAATCATTCCCATGTCTCCAGGATTGAAAGCTCAGATATCCTCGCTTGCAGGC CCTAGAATCAACGTATCAATTAAAAATGCGTTCCGATTTGGAGAAGGCCCTGTCGACATTATGGTCGACTCTGAAAACCT TCAAGCTCAGATTCCACTGATCTTAAACGAAAAGTCCATCTTACTGAGAGAGAATCTAACAGCGCACCTTAGTATAAATG AAGATGTAAATAAGGCTTTCCTACAAGAGTTTAATCCCCTCTTAGCAGGGGGAGCCTACTCACAATACCCAGTAACCTTA GAGATCGATAAACAAAACTTCTATCTCCCTATACGCCCGTATTCTTTTGAAGAATTCCGCATCCAATCCGCAACATTGGA TATGGGGAAAATCTCAATAGCAAATACAGGAACTATGTATGCTCTTTTCCAATTCCTTGATATTACGGATCAAAAGCAAT TTGTAGAATCTTGGTTCACTCCAATTTTCTTTTCTGTACAAAAAGGCTCTATCATTTGTAAGCGCCTCGACGCCCTTATC GATCGTAGAATCCGCCTTGCTCTATGGGGGAAAACTGATATCGCTCATGATCGTCTGTTTATGACCTTGGGTATCGATCC TGAAGTTATTAAGAAATACTTTCATAACACCTCTTTAAAAACTAAAAACTTCTTCCTTATAAAAATCCGAGGATCCATCT CGTCTCCTGAAGTGGACTGGTCTTCAGCTTACGCTAGAATCGCTCTATTAAAAAGCTACAGTCTTGGGAACCCGTTTAGT AGTCTTGCCGATAAGCTATTCTCTTCTCTTGGCGACTCTACCCCCCCACCAACAGTACACCCCTTCCCTTGGGAAAAATC TAATTTTGATTCTATAGAAAATAAATAG
Upstream 100 bases:
>100_bases TGAGTCAGTATTTTCCGCTCAGTTTTCTTCAGTTCCCGTTGCATTTTTTAAAACTTTTATAGCTTCCCCTTTCTGATACC ATCTTCTCTCTTATGAAGAC
Downstream 100 bases:
>100_bases AATCAATATAAAAACTTAACAGTTCTTTTTAATTAATTATTTTTATAAATCTTAAAAATAAAATTAAATTAATTATTAGG AATAAAACTCATGAGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MINLSAEATHTNDGKISMTASGEGNQIQMKLQGHIHKSTFYIVEGSSSFIELKPELASALCNQIIPLSTPITSKQIHATV SYAKIPLDITKWKHIEITSQAQLPEVAIHPKDPNLALQLRDTKLGIKKTEKFSDIRYSSSTVLGGASPSHLNGLISIDNK KHLTKFRLQQAQLPHTYLRAIFPQPFVINVPLDVAYYSLNIEGTYKNAHLEADAILDNPLLKLSCSMSGAWKNFLFKGQG TYHFNKKWQEILSPHFSYAEARFSGKAQITDTNLFFPKFSGKITARENELLIHAKFGSPNEPIKPETTSILIHGQFCSLP LSLVSNHLAPFHLKKLTFSFHTDGGKFVTKGNLQALIENPDYPDLNNTRILIPDLLLSLDESSTSPSSKDLKIQGSGEIF SLPLDSITKTYGKQVRLSPYFGSSGDLNFVVNYNPKDQNKLTLLSNFKSEALLGELKLVMDFSMKLSSGTQGTLQWEVSP ERYASFFKNASCSPTCLLHRTANVRLDISKLSCPEETKGLSCLTLLAAGGLEGSLEATPLIFYDNVSKETFIINDFKGSL RANNLDAKIEYDLKGSCLAPRQDSKTLAEFSLEGQVDHLFSPESREFKQTANWIHIPSSFIAGIIPMSPGLKAQISSLAG PRINVSIKNAFRFGEGPVDIMVDSENLQAQIPLILNEKSILLRENLTAHLSINEDVNKAFLQEFNPLLAGGAYSQYPVTL EIDKQNFYLPIRPYSFEEFRIQSATLDMGKISIANTGTMYALFQFLDITDQKQFVESWFTPIFFSVQKGSIICKRLDALI DRRIRLALWGKTDIAHDRLFMTLGIDPEVIKKYFHNTSLKTKNFFLIKIRGSISSPEVDWSSAYARIALLKSYSLGNPFS SLADKLFSSLGDSTPPPTVHPFPWEKSNFDSIENK
Sequences:
>Translated_915_residues MINLSAEATHTNDGKISMTASGEGNQIQMKLQGHIHKSTFYIVEGSSSFIELKPELASALCNQIIPLSTPITSKQIHATV SYAKIPLDITKWKHIEITSQAQLPEVAIHPKDPNLALQLRDTKLGIKKTEKFSDIRYSSSTVLGGASPSHLNGLISIDNK KHLTKFRLQQAQLPHTYLRAIFPQPFVINVPLDVAYYSLNIEGTYKNAHLEADAILDNPLLKLSCSMSGAWKNFLFKGQG TYHFNKKWQEILSPHFSYAEARFSGKAQITDTNLFFPKFSGKITARENELLIHAKFGSPNEPIKPETTSILIHGQFCSLP LSLVSNHLAPFHLKKLTFSFHTDGGKFVTKGNLQALIENPDYPDLNNTRILIPDLLLSLDESSTSPSSKDLKIQGSGEIF SLPLDSITKTYGKQVRLSPYFGSSGDLNFVVNYNPKDQNKLTLLSNFKSEALLGELKLVMDFSMKLSSGTQGTLQWEVSP ERYASFFKNASCSPTCLLHRTANVRLDISKLSCPEETKGLSCLTLLAAGGLEGSLEATPLIFYDNVSKETFIINDFKGSL RANNLDAKIEYDLKGSCLAPRQDSKTLAEFSLEGQVDHLFSPESREFKQTANWIHIPSSFIAGIIPMSPGLKAQISSLAG PRINVSIKNAFRFGEGPVDIMVDSENLQAQIPLILNEKSILLRENLTAHLSINEDVNKAFLQEFNPLLAGGAYSQYPVTL EIDKQNFYLPIRPYSFEEFRIQSATLDMGKISIANTGTMYALFQFLDITDQKQFVESWFTPIFFSVQKGSIICKRLDALI DRRIRLALWGKTDIAHDRLFMTLGIDPEVIKKYFHNTSLKTKNFFLIKIRGSISSPEVDWSSAYARIALLKSYSLGNPFS SLADKLFSSLGDSTPPPTVHPFPWEKSNFDSIENK >Mature_915_residues MINLSAEATHTNDGKISMTASGEGNQIQMKLQGHIHKSTFYIVEGSSSFIELKPELASALCNQIIPLSTPITSKQIHATV SYAKIPLDITKWKHIEITSQAQLPEVAIHPKDPNLALQLRDTKLGIKKTEKFSDIRYSSSTVLGGASPSHLNGLISIDNK KHLTKFRLQQAQLPHTYLRAIFPQPFVINVPLDVAYYSLNIEGTYKNAHLEADAILDNPLLKLSCSMSGAWKNFLFKGQG TYHFNKKWQEILSPHFSYAEARFSGKAQITDTNLFFPKFSGKITARENELLIHAKFGSPNEPIKPETTSILIHGQFCSLP LSLVSNHLAPFHLKKLTFSFHTDGGKFVTKGNLQALIENPDYPDLNNTRILIPDLLLSLDESSTSPSSKDLKIQGSGEIF SLPLDSITKTYGKQVRLSPYFGSSGDLNFVVNYNPKDQNKLTLLSNFKSEALLGELKLVMDFSMKLSSGTQGTLQWEVSP ERYASFFKNASCSPTCLLHRTANVRLDISKLSCPEETKGLSCLTLLAAGGLEGSLEATPLIFYDNVSKETFIINDFKGSL RANNLDAKIEYDLKGSCLAPRQDSKTLAEFSLEGQVDHLFSPESREFKQTANWIHIPSSFIAGIIPMSPGLKAQISSLAG PRINVSIKNAFRFGEGPVDIMVDSENLQAQIPLILNEKSILLRENLTAHLSINEDVNKAFLQEFNPLLAGGAYSQYPVTL EIDKQNFYLPIRPYSFEEFRIQSATLDMGKISIANTGTMYALFQFLDITDQKQFVESWFTPIFFSVQKGSIICKRLDALI DRRIRLALWGKTDIAHDRLFMTLGIDPEVIKKYFHNTSLKTKNFFLIKIRGSISSPEVDWSSAYARIALLKSYSLGNPFS SLADKLFSSLGDSTPPPTVHPFPWEKSNFDSIENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102024; Mature: 102024
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLSAEATHTNDGKISMTASGEGNQIQMKLQGHIHKSTFYIVEGSSSFIELKPELASAL CEEECCCCCCCCCCEEEEEECCCCCEEEEEEECEEEEEEEEEEECCCCEEEECHHHHHHH CNQIIPLSTPITSKQIHATVSYAKIPLDITKWKHIEITSQAQLPEVAIHPKDPNLALQLR HHCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEE DTKLGIKKTEKFSDIRYSSSTVLGGASPSHLNGLISIDNKKHLTKFRLQQAQLPHTYLRA CCCCCCCCCCCCCCCEECCCEEECCCCHHHCCEEEEECCCHHHHHHHHHHHCCCHHHHHH IFPQPFVINVPLDVAYYSLNIEGTYKNAHLEADAILDNPLLKLSCSMSGAWKNFLFKGQG HCCCCEEEECCCEEEEEEEEEEEEECCCEEEEHHEECCCEEEEEECCCCCCHHEEEECCC TYHFNKKWQEILSPHFSYAEARFSGKAQITDTNLFFPKFSGKITARENELLIHAKFGSPN EEECCHHHHHHCCCCCCHHHHHCCCCEEEEECEEEEECCCCEEEEECCEEEEEEECCCCC EPIKPETTSILIHGQFCSLPLSLVSNHLAPFHLKKLTFSFHTDGGKFVTKGNLQALIENP CCCCCCCEEEEEEEHHHCCCHHHHHCCCCCEEEEEEEEEEECCCCEEEECCCEEEEECCC DYPDLNNTRILIPDLLLSLDESSTSPSSKDLKIQGSGEIFSLPLDSITKTYGKQVRLSPY CCCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCHHHHHHHCCCEEEEEEC FGSSGDLNFVVNYNPKDQNKLTLLSNFKSEALLGELKLVMDFSMKLSSGTQGTLQWEVSP CCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHEEEEEEEEEEECCCCCCEEEEEECH ERYASFFKNASCSPTCLLHRTANVRLDISKLSCPEETKGLSCLTLLAAGGLEGSLEATPL HHHHHHHCCCCCCCEEEEEECCCEEEEEHHCCCCCHHCCCEEEEEECCCCCCCCCCCCEE IFYDNVSKETFIINDFKGSLRANNLDAKIEYDLKGSCLAPRQDSKTLAEFSLEGQVDHLF EEEECCCCCEEEEECCCCCEECCCCCEEEEECCCCCEECCCCCCCCHHHEEECCCHHCCC SPESREFKQTANWIHIPSSFIAGIIPMSPGLKAQISSLAGPRINVSIKNAFRFGEGPVDI CCCCHHHHHCCCEEECCHHHHHEEECCCCCCHHHHHHCCCCEEEEEEEHEEECCCCCEEE MVDSENLQAQIPLILNEKSILLRENLTAHLSINEDVNKAFLQEFNPLLAGGAYSQYPVTL EEECCCCEEEEEEEECCCEEEEECCCEEEEEECCHHHHHHHHHCCHHHCCCCCCCCCEEE EIDKQNFYLPIRPYSFEEFRIQSATLDMGKISIANTGTMYALFQFLDITDQKQFVESWFT EECCCCEEEEECCCCCHHEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCC PIFFSVQKGSIICKRLDALIDRRIRLALWGKTDIAHDRLFMTLGIDPEVIKKYFHNTSLK EEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCC TKNFFLIKIRGSISSPEVDWSSAYARIALLKSYSLGNPFSSLADKLFSSLGDSTPPPTVH CCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC PFPWEKSNFDSIENK CCCCCCCCCCCCCCC >Mature Secondary Structure MINLSAEATHTNDGKISMTASGEGNQIQMKLQGHIHKSTFYIVEGSSSFIELKPELASAL CEEECCCCCCCCCCEEEEEECCCCCEEEEEEECEEEEEEEEEEECCCCEEEECHHHHHHH CNQIIPLSTPITSKQIHATVSYAKIPLDITKWKHIEITSQAQLPEVAIHPKDPNLALQLR HHCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEE DTKLGIKKTEKFSDIRYSSSTVLGGASPSHLNGLISIDNKKHLTKFRLQQAQLPHTYLRA CCCCCCCCCCCCCCCEECCCEEECCCCHHHCCEEEEECCCHHHHHHHHHHHCCCHHHHHH IFPQPFVINVPLDVAYYSLNIEGTYKNAHLEADAILDNPLLKLSCSMSGAWKNFLFKGQG HCCCCEEEECCCEEEEEEEEEEEEECCCEEEEHHEECCCEEEEEECCCCCCHHEEEECCC TYHFNKKWQEILSPHFSYAEARFSGKAQITDTNLFFPKFSGKITARENELLIHAKFGSPN EEECCHHHHHHCCCCCCHHHHHCCCCEEEEECEEEEECCCCEEEEECCEEEEEEECCCCC EPIKPETTSILIHGQFCSLPLSLVSNHLAPFHLKKLTFSFHTDGGKFVTKGNLQALIENP CCCCCCCEEEEEEEHHHCCCHHHHHCCCCCEEEEEEEEEEECCCCEEEECCCEEEEECCC DYPDLNNTRILIPDLLLSLDESSTSPSSKDLKIQGSGEIFSLPLDSITKTYGKQVRLSPY CCCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEECCCCEEECCHHHHHHHCCCEEEEEEC FGSSGDLNFVVNYNPKDQNKLTLLSNFKSEALLGELKLVMDFSMKLSSGTQGTLQWEVSP CCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHEEEEEEEEEEECCCCCCEEEEEECH ERYASFFKNASCSPTCLLHRTANVRLDISKLSCPEETKGLSCLTLLAAGGLEGSLEATPL HHHHHHHCCCCCCCEEEEEECCCEEEEEHHCCCCCHHCCCEEEEEECCCCCCCCCCCCEE IFYDNVSKETFIINDFKGSLRANNLDAKIEYDLKGSCLAPRQDSKTLAEFSLEGQVDHLF EEEECCCCCEEEEECCCCCEECCCCCEEEEECCCCCEECCCCCCCCHHHEEECCCHHCCC SPESREFKQTANWIHIPSSFIAGIIPMSPGLKAQISSLAGPRINVSIKNAFRFGEGPVDI CCCCHHHHHCCCEEECCHHHHHEEECCCCCCHHHHHHCCCCEEEEEEEHEEECCCCCEEE MVDSENLQAQIPLILNEKSILLRENLTAHLSINEDVNKAFLQEFNPLLAGGAYSQYPVTL EEECCCCEEEEEEEECCCEEEEECCCEEEEEECCHHHHHHHHHCCHHHCCCCCCCCCEEE EIDKQNFYLPIRPYSFEEFRIQSATLDMGKISIANTGTMYALFQFLDITDQKQFVESWFT EECCCCEEEEECCCCCHHEEEEEEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHCC PIFFSVQKGSIICKRLDALIDRRIRLALWGKTDIAHDRLFMTLGIDPEVIKKYFHNTSLK EEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCC TKNFFLIKIRGSISSPEVDWSSAYARIALLKSYSLGNPFSSLADKLFSSLGDSTPPPTVH CCCEEEEEEECCCCCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC PFPWEKSNFDSIENK CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA