| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835721
GI number: 15835721
Start: 222522
End: 223694
Strand: Direct
Name: Not Available
Synonym: CPj0186
Alternate gene names: NA
Gene position: 222522-223694 (Clockwise)
Preceding gene: 15835711
Following gene: 15835722
Centisome position: 18.14
GC content: 40.92
Gene sequence:
>1173_bases ATGTCATCTCCTGTAAATAACACACCCTCAGCACCAAACATTCCAATACCAGCGCCCACGACTCCAGGTATTCCTACAAC AAAACCTCGTTCTAGTTTCATTGAAAAGGTTATCATTGTAGCTAAGTACATACTATTTGCAATTGCAGCCACATCAGGAG CACTCGGAACAATTCTAGGTCTATCTGGAGCGCTAACCCCAGGAATAGGTATTGCCCTTCTTGTTATCTTCTTTGTTTCT ATGGTGCTTTTAGGTTTAATCCTTAAAGATTCTATAAGTGGAGGAGAAGAACGCAGGCTCAGAGAAGAGGTCTCTCGATT TACAAGTGAGAATCAACGGTTGACAGTCATAACCACAACACTTGAGACTGAAGTAAAGGATTTAAAAGCAGCTAAAGATC AACTTACACTTGAAATCGAAGCATTTAGAAATGAAAACGGTAATTTAAAAACAACTGCTGAGGACTTAGAAGAGCAGGTT TCTAAACTTAGCGAACAATTAGAAGCACTAGAGCGAATTAATCAACTTATCCAAGCAAACGCTGGAGATGCTCAAGAAAT TTCGTCTGAACTAAAGAAATTAATAAGCGGTTGGGATTCCAAAGTTGTTGAACAGATAAATACTTCTATTCAAGCATTGA AAGTGTTATTGGGTCAAGAGTGGGTGCAAGAGGCTCAAACACACGTTAAAGCAATGCAAGAGCAAATTCAAGCATTGCAA GCTGAAATTCTAGGAATGCACAATCAATCTACAGCATTGCAAAAGTCAGTTGAGAATCTATTAGTACAAGATCAAGCTCT AACAAGAGTAGTAGGTGAGTTGTTAGAGTCTGAGAACAAGCTAAGCCAAGCTTGTTCTGCGCTACGTCAAGAAATAGAAA AGTTGGCCCAACATGAAACATCTTTGCAACAACGTATTGATGCGATGCTAGCCCAAGAGCAAAATTTGGCAGAGCAGGTC ACAGCCCTTGAAAAAATGAAACAAGAAGCTCAGAAGGCTGAGTCCGAGTTCATTGCTTGTGTACGTGATCGAACTTTCGG ACGTCGTGAAACACCTCCACCAACAACACCTGTAGTTGAAGGTGATGAAAGTCAAGAAGAAGACGAAGGAGGTACTCCCC CAGTATCACAACCATCTTCACCCGTAGATAGAGCAACAGGAGATGGTCAGTAA
Upstream 100 bases:
>100_bases TATTTTGGATCCTCAGCAAGAAAGGTATAAATTTCTTGATTTTTAGATCGAGAAAAACAACAATTCTTATCCAAGTTAAC CTATTAAGGATAAAATTCTT
Downstream 100 bases:
>100_bases TCTGCCGTAAAGTCTTCAAAGACTTCCTTAGAAAATAAGCAGTAAAGTTTTAACTTTACTGCTTATTTTTTTTTGAAATG AACTCACTCATTAAAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSSPVNNTPSAPNIPIPAPTTPGIPTTKPRSSFIEKVIIVAKYILFAIAATSGALGTILGLSGALTPGIGIALLVIFFVS MVLLGLILKDSISGGEERRLREEVSRFTSENQRLTVITTTLETEVKDLKAAKDQLTLEIEAFRNENGNLKTTAEDLEEQV SKLSEQLEALERINQLIQANAGDAQEISSELKKLISGWDSKVVEQINTSIQALKVLLGQEWVQEAQTHVKAMQEQIQALQ AEILGMHNQSTALQKSVENLLVQDQALTRVVGELLESENKLSQACSALRQEIEKLAQHETSLQQRIDAMLAQEQNLAEQV TALEKMKQEAQKAESEFIACVRDRTFGRRETPPPTTPVVEGDESQEEDEGGTPPVSQPSSPVDRATGDGQ
Sequences:
>Translated_390_residues MSSPVNNTPSAPNIPIPAPTTPGIPTTKPRSSFIEKVIIVAKYILFAIAATSGALGTILGLSGALTPGIGIALLVIFFVS MVLLGLILKDSISGGEERRLREEVSRFTSENQRLTVITTTLETEVKDLKAAKDQLTLEIEAFRNENGNLKTTAEDLEEQV SKLSEQLEALERINQLIQANAGDAQEISSELKKLISGWDSKVVEQINTSIQALKVLLGQEWVQEAQTHVKAMQEQIQALQ AEILGMHNQSTALQKSVENLLVQDQALTRVVGELLESENKLSQACSALRQEIEKLAQHETSLQQRIDAMLAQEQNLAEQV TALEKMKQEAQKAESEFIACVRDRTFGRRETPPPTTPVVEGDESQEEDEGGTPPVSQPSSPVDRATGDGQ >Mature_389_residues SSPVNNTPSAPNIPIPAPTTPGIPTTKPRSSFIEKVIIVAKYILFAIAATSGALGTILGLSGALTPGIGIALLVIFFVSM VLLGLILKDSISGGEERRLREEVSRFTSENQRLTVITTTLETEVKDLKAAKDQLTLEIEAFRNENGNLKTTAEDLEEQVS KLSEQLEALERINQLIQANAGDAQEISSELKKLISGWDSKVVEQINTSIQALKVLLGQEWVQEAQTHVKAMQEQIQALQA EILGMHNQSTALQKSVENLLVQDQALTRVVGELLESENKLSQACSALRQEIEKLAQHETSLQQRIDAMLAQEQNLAEQVT ALEKMKQEAQKAESEFIACVRDRTFGRRETPPPTTPVVEGDESQEEDEGGTPPVSQPSSPVDRATGDGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42508; Mature: 42376
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVNNTPSAPNIPIPAPTTPGIPTTKPRSSFIEKVIIVAKYILFAIAATSGALGTILG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LSGALTPGIGIALLVIFFVSMVLLGLILKDSISGGEERRLREEVSRFTSENQRLTVITTT HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHH LETEVKDLKAAKDQLTLEIEAFRNENGNLKTTAEDLEEQVSKLSEQLEALERINQLIQAN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGDAQEISSELKKLISGWDSKVVEQINTSIQALKVLLGQEWVQEAQTHVKAMQEQIQALQ CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEILGMHNQSTALQKSVENLLVQDQALTRVVGELLESENKLSQACSALRQEIEKLAQHET HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQQRIDAMLAQEQNLAEQVTALEKMKQEAQKAESEFIACVRDRTFGRRETPPPTTPVVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDESQEEDEGGTPPVSQPSSPVDRATGDGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSPVNNTPSAPNIPIPAPTTPGIPTTKPRSSFIEKVIIVAKYILFAIAATSGALGTILG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LSGALTPGIGIALLVIFFVSMVLLGLILKDSISGGEERRLREEVSRFTSENQRLTVITTT HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHH LETEVKDLKAAKDQLTLEIEAFRNENGNLKTTAEDLEEQVSKLSEQLEALERINQLIQAN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGDAQEISSELKKLISGWDSKVVEQINTSIQALKVLLGQEWVQEAQTHVKAMQEQIQALQ CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEILGMHNQSTALQKSVENLLVQDQALTRVVGELLESENKLSQACSALRQEIEKLAQHET HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLQQRIDAMLAQEQNLAEQVTALEKMKQEAQKAESEFIACVRDRTFGRRETPPPTTPVVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDESQEEDEGGTPPVSQPSSPVDRATGDGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA