| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835711
GI number: 15835711
Start: 214909
End: 216144
Strand: Direct
Name: Not Available
Synonym: CPj0176
Alternate gene names: NA
Gene position: 214909-216144 (Clockwise)
Preceding gene: 15835710
Following gene: 15835721
Centisome position: 17.52
GC content: 38.03
Gene sequence:
>1236_bases ATGGATGAATCCGATGGAGAAGAAGCTTCAAAAGATTCTGCATTTTCAGCTAGTTTTTCCTATGAGTTTGTAAAATCAAG TACTCGAGAATCTAAAAATACAGTCACACACTCAACAGCGTCTCGTACATTATATATTTTAAGGCAGGATTGTTCTTATG ATCCAAGAGCTCTCAAAGTAGATGATGAATTTCGTTATTGGGTAGAAAAAAGGTTGGACGCCAAGAATCCAGATTCATTA AATGCGTTCGTTAAAGAGGTAGGAACTCATTATGTCGCGTCAGTGACTTACGGTGGCATTGGTTTTCAAGTGCTAAAGAT GTCTTATCTCCAAGTCGAGGAGTTAGAGAAAGAAAAAATCTCGATATCTGTAGCTGCAGCAAGTTCTTTATTAAAAAGTA AAACATCGAACGCGACAGAGAAAGGTTATTCTTCGTATCAGTCGGAATCATCAGCTCAAACAGTATTTCTTGGTGGAACA GTATTACCTGATCTCCAGCAAGACAAGTTGGATTTCAAAGATTGGTCTGAAAGCATTCCTAATGAGCCCATTCCTCTAGC TATTAGTGTATCTTCAATTACAGATCTCATAATTCCAGAACTTTTCCCTTCTGAAGATGCTCAAGTCTTATCCCAGAAGA AATCAGCTCTAGGACAAGTTATTCTTAATTATCTAGAGAGTCACAAGCCTAAAGAAGAAGGCCCAAAACCAGTCCAAATT ACTTCTGGATTCAATTCATCGTCTTCGGTATTTACGCTTCAAGCAGCAAAAGCTCCTAAGACTGTGTCTTTCCCCTATAT AGATTATTGGTCTACAATTCCCTATCTTTTCCCCACTCTTAAAGAAACTTCAGGTGCTCAACCTCTCTCGTTCTACTTGA GGTTTGATGACATCTTTGAGCAACAAAATTTAGTCCATAATACTTCATATATTTTAGCTTCAACCTCGGTGAGGTTAGGA TATTTCGGAGATTCATATAGAGATTATGATGCTCTATCTTTCTATGGTAGTTGGCCTCAAGCATATTTTGACTGGGCAGG CTATAAAGATAGGTGTACTTGGACCTTAGAAAAACTCAATACAACTGGAGATCTTTTCATCCGTTCTGGAGACGAGATAC GTTTAAAACACAATACCTCTGGGAAATATCTTGCTACAACGAGCATGTCTGATGGCTATCAGACATTAACTTGTACGACA CAGACGAGTGATTCTGTCTTTATAATTACTGTATAA
Upstream 100 bases:
>100_bases ACAGTCGCTGCTTGTATTATAGAGAACTCCTTCTTAACTGATTCTATGAGCCCGGAGCTTCTCAGCGAAGTTAAGGAAGC TCTGAAACGATGATGATCCT
Downstream 100 bases:
>100_bases ATAGAGTTAAGACATCCCCTTAAGTTTTAAGGGGATGTCTTATTTGCTTTCTAGAGAACTCATCTCTAAGTAAACTTCTT TTCTTAGGGCTGAGGAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phospholipase D Endonuclease
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MDESDGEEASKDSAFSASFSYEFVKSSTRESKNTVTHSTASRTLYILRQDCSYDPRALKVDDEFRYWVEKRLDAKNPDSL NAFVKEVGTHYVASVTYGGIGFQVLKMSYLQVEELEKEKISISVAAASSLLKSKTSNATEKGYSSYQSESSAQTVFLGGT VLPDLQQDKLDFKDWSESIPNEPIPLAISVSSITDLIIPELFPSEDAQVLSQKKSALGQVILNYLESHKPKEEGPKPVQI TSGFNSSSSVFTLQAAKAPKTVSFPYIDYWSTIPYLFPTLKETSGAQPLSFYLRFDDIFEQQNLVHNTSYILASTSVRLG YFGDSYRDYDALSFYGSWPQAYFDWAGYKDRCTWTLEKLNTTGDLFIRSGDEIRLKHNTSGKYLATTSMSDGYQTLTCTT QTSDSVFIITV
Sequences:
>Translated_411_residues MDESDGEEASKDSAFSASFSYEFVKSSTRESKNTVTHSTASRTLYILRQDCSYDPRALKVDDEFRYWVEKRLDAKNPDSL NAFVKEVGTHYVASVTYGGIGFQVLKMSYLQVEELEKEKISISVAAASSLLKSKTSNATEKGYSSYQSESSAQTVFLGGT VLPDLQQDKLDFKDWSESIPNEPIPLAISVSSITDLIIPELFPSEDAQVLSQKKSALGQVILNYLESHKPKEEGPKPVQI TSGFNSSSSVFTLQAAKAPKTVSFPYIDYWSTIPYLFPTLKETSGAQPLSFYLRFDDIFEQQNLVHNTSYILASTSVRLG YFGDSYRDYDALSFYGSWPQAYFDWAGYKDRCTWTLEKLNTTGDLFIRSGDEIRLKHNTSGKYLATTSMSDGYQTLTCTT QTSDSVFIITV >Mature_411_residues MDESDGEEASKDSAFSASFSYEFVKSSTRESKNTVTHSTASRTLYILRQDCSYDPRALKVDDEFRYWVEKRLDAKNPDSL NAFVKEVGTHYVASVTYGGIGFQVLKMSYLQVEELEKEKISISVAAASSLLKSKTSNATEKGYSSYQSESSAQTVFLGGT VLPDLQQDKLDFKDWSESIPNEPIPLAISVSSITDLIIPELFPSEDAQVLSQKKSALGQVILNYLESHKPKEEGPKPVQI TSGFNSSSSVFTLQAAKAPKTVSFPYIDYWSTIPYLFPTLKETSGAQPLSFYLRFDDIFEQQNLVHNTSYILASTSVRLG YFGDSYRDYDALSFYGSWPQAYFDWAGYKDRCTWTLEKLNTTGDLFIRSGDEIRLKHNTSGKYLATTSMSDGYQTLTCTT QTSDSVFIITV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45998; Mature: 45998
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS50919 MIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESDGEEASKDSAFSASFSYEFVKSSTRESKNTVTHSTASRTLYILRQDCSYDPRALKV CCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCEEEE DDEFRYWVEKRLDAKNPDSLNAFVKEVGTHYVASVTYGGIGFQVLKMSYLQVEELEKEKI CHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHE SISVAAASSLLKSKTSNATEKGYSSYQSESSAQTVFLGGTVLPDLQQDKLDFKDWSESIP EEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCC NEPIPLAISVSSITDLIIPELFPSEDAQVLSQKKSALGQVILNYLESHKPKEEGPKPVQI CCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEE TSGFNSSSSVFTLQAAKAPKTVSFPYIDYWSTIPYLFPTLKETSGAQPLSFYLRFDDIFE ECCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH QQNLVHNTSYILASTSVRLGYFGDSYRDYDALSFYGSWPQAYFDWAGYKDRCTWTLEKLN HHHHHCCCEEEEEECEEEEEECCCCCCCCCCEEECCCCCHHHHCCCCCCCCEEEEEECCC TTGDLFIRSGDEIRLKHNTSGKYLATTSMSDGYQTLTCTTQTSDSVFIITV CCCEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEC >Mature Secondary Structure MDESDGEEASKDSAFSASFSYEFVKSSTRESKNTVTHSTASRTLYILRQDCSYDPRALKV CCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCEEECCCCEEEEEEEECCCCCCCEEEE DDEFRYWVEKRLDAKNPDSLNAFVKEVGTHYVASVTYGGIGFQVLKMSYLQVEELEKEKI CHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHE SISVAAASSLLKSKTSNATEKGYSSYQSESSAQTVFLGGTVLPDLQQDKLDFKDWSESIP EEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCC NEPIPLAISVSSITDLIIPELFPSEDAQVLSQKKSALGQVILNYLESHKPKEEGPKPVQI CCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEE TSGFNSSSSVFTLQAAKAPKTVSFPYIDYWSTIPYLFPTLKETSGAQPLSFYLRFDDIFE ECCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH QQNLVHNTSYILASTSVRLGYFGDSYRDYDALSFYGSWPQAYFDWAGYKDRCTWTLEKLN HHHHHCCCEEEEEECEEEEEECCCCCCCCCCEEECCCCCHHHHCCCCCCCCEEEEEECCC TTGDLFIRSGDEIRLKHNTSGKYLATTSMSDGYQTLTCTTQTSDSVFIITV CCCEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA