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The map label for this gene is yqgE

Identifier: 15835674

GI number: 15835674

Start: 173801

End: 174367

Strand: Reverse

Name: yqgE

Synonym: CPj0139

Alternate gene names: 15835674

Gene position: 174367-173801 (Counterclockwise)

Preceding gene: 15835675

Following gene: 15835673

Centisome position: 14.22

GC content: 40.74

Gene sequence:

>567_bases
ATGAAAATTCCTTATGCACGCCTAGAAAAAGGATCTTTGTTAGTCGCTTCTCCTGATATAAACCAAGGAGTCTTTGCTCG
TAGTGTCATCCTACTTTGTGAACATAGCCTCAATGGTTCTTTCGGTCTCATCTTAAATAAAACCCTGGGATTTGAAATCT
CAGATGACATCTTTACCTTTGAAAAAGTCTCCAATCATAATATCCGCTTTTGTATGGGAGGCCCCCTACAAGCAAACCAA
ATGATGTTACTTCATTCATGCTCCGAAATTCCTGAACAAACGTTAGAAATTTGTCCATCAGTCTACTTAGGAGGAGATCT
TCCCTTCCTCCAAGAAATCGCCTCTAGCGAATCTGGGCCAGAAATCAACCTATGTTTTGGCTATAGCGGATGGCAAGCAG
GACAACTTGAAAAAGAATTCCTAAGCAATGACTGGTTTCTAGCTCCAGGGAACAAAGACTACGTCTTTTACTCAGAACCA
GAAGATCTCTGGGCTTTAGTTCTTAAAGATCTTGGAGGAAAATATGCCTCGCTTTCTACAGTCCCTGACAATCTATTGCT
AAACTAA

Upstream 100 bases:

>100_bases
GATAGCATCCCTCTCGCCTTAACTCATAAAATCCCCATCTTGTGTGTTAAATCAGTATTTGATGCTGTAGTCCCCTACGA
AGAATAAACTCAGAGATATT

Downstream 100 bases:

>100_bases
CTCACGGCTTTTTCTAGCCATTAAAGATCAGCTTCTCCAAAATATGTGGAAACTCACTAAAAGAAATTCCATGTTGAACT
GCTCAAATCAAAAGCATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLGFEISDDIFTFEKVSNHNIRFCMGGPLQANQ
MMLLHSCSEIPEQTLEICPSVYLGGDLPFLQEIASSESGPEINLCFGYSGWQAGQLEKEFLSNDWFLAPGNKDYVFYSEP
EDLWALVLKDLGGKYASLSTVPDNLLLN

Sequences:

>Translated_188_residues
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLGFEISDDIFTFEKVSNHNIRFCMGGPLQANQ
MMLLHSCSEIPEQTLEICPSVYLGGDLPFLQEIASSESGPEINLCFGYSGWQAGQLEKEFLSNDWFLAPGNKDYVFYSEP
EDLWALVLKDLGGKYASLSTVPDNLLLN
>Mature_188_residues
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLGFEISDDIFTFEKVSNHNIRFCMGGPLQANQ
MMLLHSCSEIPEQTLEICPSVYLGGDLPFLQEIASSESGPEINLCFGYSGWQAGQLEKEFLSNDWFLAPGNKDYVFYSEP
EDLWALVLKDLGGKYASLSTVPDNLLLN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=167, Percent_Identity=28.1437125748503, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y139_CHLPN (Q9Z944)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   C86508
- PIR:   H72114
- RefSeq:   NP_224347.1
- RefSeq:   NP_300198.1
- RefSeq:   NP_445175.1
- RefSeq:   NP_876416.1
- ProteinModelPortal:   Q9Z944
- SMR:   Q9Z944
- GeneID:   1466823
- GeneID:   894735
- GeneID:   918928
- GeneID:   963259
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0633
- KEGG:   cpj:CPj0139
- KEGG:   cpn:CPn0139
- KEGG:   cpt:CpB0140
- TIGR:   CP_0633
- HOGENOM:   HBG530212
- OMA:   GDKIFHN
- PhylomeDB:   Q9Z944
- ProtClustDB:   PRK00228
- BioCyc:   CPNE115711:CP_0633-MONOMER
- BioCyc:   CPNE115713:CPN0139-MONOMER
- BioCyc:   CPNE138677:CPJ0139-MONOMER
- BioCyc:   CPNE182082:CPB0140-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20818; Mature: 20818

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLGFEISDDIFTF
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCEECCCEEEE
EKVSNHNIRFCMGGPLQANQMMLLHSCSEIPEQTLEICPSVYLGGDLPFLQEIASSESGP
EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCC
EINLCFGYSGWQAGQLEKEFLSNDWFLAPGNKDYVFYSEPEDLWALVLKDLGGKYASLST
EEEEEECCCCCCCCCHHHHHHCCCCEECCCCCCEEEECCCHHHHHHHHHHHCCCEEEECC
VPDNLLLN
CCCCCCCC
>Mature Secondary Structure
MKIPYARLEKGSLLVASPDINQGVFARSVILLCEHSLNGSFGLILNKTLGFEISDDIFTF
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHEECCCCCCEEEEEEEEECCEECCCEEEE
EKVSNHNIRFCMGGPLQANQMMLLHSCSEIPEQTLEICPSVYLGGDLPFLQEIASSESGP
EECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCC
EINLCFGYSGWQAGQLEKEFLSNDWFLAPGNKDYVFYSEPEDLWALVLKDLGGKYASLST
EEEEEECCCCCCCCCHHHHHHCCCCEECCCCCCEEEECCCHHHHHHHHHHHCCCEEEECC
VPDNLLLN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362