| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835641
GI number: 15835641
Start: 133737
End: 134558
Strand: Reverse
Name: Not Available
Synonym: CPj0105
Alternate gene names: NA
Gene position: 134558-133737 (Counterclockwise)
Preceding gene: 15835643
Following gene: 15835640
Centisome position: 10.97
GC content: 39.66
Gene sequence:
>822_bases ATGCTGCTAATTTATTGTAAAAAAAAAGAGATACATTTACAATGGCCTCAAACTGCTAAGATTAGATTCACCCCCAAGAT CGCTATGAAAGTCAAAATTAATGATCAACTGATTTGTATTCCCCCATTCATCTCTGCAAGATGGAGCCAAATTGCATTTA TTGAATCCCAGGAAGGAGAAAACAAAGACCAAGGAACACTAAGGCTCCACCTTATTGATGGCAAAATCATTTCTATTCCT AATTTAGATCAGTCGATTATTGACATTGCTTTTCAAGAGCACCTTCTCTACCTAGAAACTTCTCAATCGGGGAAAGAGGA TTCTCGTGATGATGATAAACTAGGTGTAGGGGTCCTTATGAATGTATTGCAGCAGATAACTAAGGGAAACGACATTCAAG TATTACCTAAAAATCTAATTTCCCCTCTCTTTTCTGGAACAAATCCCATCGAAGCAATACTACAACATACTCCAGAACAT AAAGATCATCCTGATGCTCCTACCGACGTCTTAGAGAAAATGGCTGATGTCATTCGGGTACTTTCAGGGAATAATGCAAC GCTTTTACCCAGACCAGAACCCCATTGCAATTGTATGCACTGCCAAATTGGAAGGGTCATGAATGAAGAAGATACCCTGG CGGTCTCTGATAAAGATCTGACTTTCCGCACTTGGGACATTATGCAAAGTGGGGATAAGTTGTATATTGTAACGAATCCC TTAAATCCTAGTGATCAGTTTAGCGTCTACTTGGGACCCCCCATAGGCTGTACTTGTGGCGAACCCAACTGTGAACATAT AAAAGCTGTTTTATATACTTAG
Upstream 100 bases:
>100_bases TTTCGTTTTTCTATCAGGAACTATTGCAAAAAATATATTCATAATAAAAAATCCATTTACATGATACGTGCCTTTTAGAA AATTTAGCAATCAAAACCCT
Downstream 100 bases:
>100_bases TAGAACTGCATTCATAATTAAGCTTTTGGTAAGCCGATTGACTTTTTCCTTGAAGTCAATATAATTCTTTTTCTAGGGGT TAATCTCCTTTTTGCTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQIAFIESQEGENKDQGTLRLHLIDGKIISIP NLDQSIIDIAFQEHLLYLETSQSGKEDSRDDDKLGVGVLMNVLQQITKGNDIQVLPKNLISPLFSGTNPIEAILQHTPEH KDHPDAPTDVLEKMADVIRVLSGNNATLLPRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNP LNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT
Sequences:
>Translated_273_residues MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQIAFIESQEGENKDQGTLRLHLIDGKIISIP NLDQSIIDIAFQEHLLYLETSQSGKEDSRDDDKLGVGVLMNVLQQITKGNDIQVLPKNLISPLFSGTNPIEAILQHTPEH KDHPDAPTDVLEKMADVIRVLSGNNATLLPRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNP LNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT >Mature_273_residues MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQIAFIESQEGENKDQGTLRLHLIDGKIISIP NLDQSIIDIAFQEHLLYLETSQSGKEDSRDDDKLGVGVLMNVLQQITKGNDIQVLPKNLISPLFSGTNPIEAILQHTPEH KDHPDAPTDVLEKMADVIRVLSGNNATLLPRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNP LNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30718; Mature: 30718
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQIAFIESQEGE CEEEEEECCEEEEECCCCEEEEECCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCC NKDQGTLRLHLIDGKIISIPNLDQSIIDIAFQEHLLYLETSQSGKEDSRDDDKLGVGVLM CCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHH NVLQQITKGNDIQVLPKNLISPLFSGTNPIEAILQHTPEHKDHPDAPTDVLEKMADVIRV HHHHHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LSGNNATLLPRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNP HCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEHHHHCCCEEEEEECC LNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT CCCCCCEEEEECCCCCCCCCCCCHHHEEEEECC >Mature Secondary Structure MLLIYCKKKEIHLQWPQTAKIRFTPKIAMKVKINDQLICIPPFISARWSQIAFIESQEGE CEEEEEECCEEEEECCCCEEEEECCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCC NKDQGTLRLHLIDGKIISIPNLDQSIIDIAFQEHLLYLETSQSGKEDSRDDDKLGVGVLM CCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHH NVLQQITKGNDIQVLPKNLISPLFSGTNPIEAILQHTPEHKDHPDAPTDVLEKMADVIRV HHHHHHHCCCCEEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LSGNNATLLPRPEPHCNCMHCQIGRVMNEEDTLAVSDKDLTFRTWDIMQSGDKLYIVTNP HCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEHHHHCCCEEEEEECC LNPSDQFSVYLGPPIGCTCGEPNCEHIKAVLYT CCCCCCEEEEECCCCCCCCCCCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA